RNA–Protein interactions for RNA: ENST00000364065.1

RNU6-1090P-201, Transcript of RNA, U6 small nuclear 1090, pseudogene, humanhuman

BASIC

Gene RNU6-1090P, Length 94 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1090P-201ENST00000364065 KLHL34Q8N239 644 aa11.06□□□□□ -0.64
RNU6-1090P-201ENST00000364065 CCDC61Q9Y6R9 512 aa11.06□□□□□ -0.64
RNU6-1090P-201ENST00000364065 GALR2O43603 387 aaPredicted RBP11.03□□□□□ -0.64
RNU6-1090P-201ENST00000364065 NUBP1P53384 320 aa11.03□□□□□ -0.64
RNU6-1090P-201ENST00000364065 KIF12Q96FN5 646 aa10.97□□□□□ -0.65
RNU6-1090P-201ENST00000364065 MS4A3Q96HJ5 214 aa10.97□□□□□ -0.65
RNU6-1090P-201ENST00000364065 DCAF8Q5TAQ9 597 aa10.95□□□□□ -0.66
RNU6-1090P-201ENST00000364065 SGIP1Q9BQI5 828 aa10.95□□□□□ -0.66
RNU6-1090P-201ENST00000364065 POTEIP0CG38 1075 aa10.94□□□□□ -0.66
RNU6-1090P-201ENST00000364065 GSE1Q14687 1217 aa10.93□□□□□ -0.66
RNU6-1090P-201ENST00000364065 MAP3K13O43283 966 aa10.91□□□□□ -0.66
RNU6-1090P-201ENST00000364065 SPOCK2Q92563 424 aa10.9□□□□□ -0.66
RNU6-1090P-201ENST00000364065 PCDHB13Q9Y5F0 798 aa10.89□□□□□ -0.67
RNU6-1090P-201ENST00000364065 ASTLQ6HA08 431 aaPredicted RBP10.88□□□□□ -0.67
RNU6-1090P-201ENST00000364065 TIE1P35590 1138 aa10.86□□□□□ -0.67
RNU6-1090P-201ENST00000364065 LHX8Q68G74 356 aa10.86□□□□□ -0.67
RNU6-1090P-201ENST00000364065 IFNLR1Q8IU57 520 aaPredicted RBP10.86□□□□□ -0.67
RNU6-1090P-201ENST00000364065 ATMINO43313 823 aaPredicted RBP10.84□□□□□ -0.67
RNU6-1090P-201ENST00000364065 SLC39A7Q92504 469 aa10.83□□□□□ -0.68
RNU6-1090P-201ENST00000364065 C7P10643 843 aa10.81□□□□□ -0.68
RNU6-1090P-201ENST00000364065 PYGBP11216 843 aa10.81□□□□□ -0.68
RNU6-1090P-201ENST00000364065 BMP2KQ9NSY1 1161 aaPredicted RBP10.79□□□□□ -0.68
RNU6-1090P-201ENST00000364065 IFNL1Q8IU54 200 aa10.78□□□□□ -0.68
RNU6-1090P-201ENST00000364065 CIZ1Q9ULV3 898 aaPredicted RBP10.78□□□□□ -0.68
RNU6-1090P-201ENST00000364065 CHRM1P11229 460 aaPredicted RBP10.77□□□□□ -0.69
RNU6-1090P-201ENST00000364065 ZNF467Q7Z7K2 595 aaPredicted RBP10.77□□□□□ -0.69
RNU6-1090P-201ENST00000364065 METRNQ9UJH8 293 aa10.77□□□□□ -0.69
RNU6-1090P-201ENST00000364065 ATN1P54259 1190 aaPredicted RBP10.76□□□□□ -0.69
RNU6-1090P-201ENST00000364065 PELP1Q8IZL8 1130 aaKnown RBP10.75□□□□□ -0.69
RNU6-1090P-201ENST00000364065 TRIM41Q8WV44 630 aa10.75□□□□□ -0.69
RNU6-1090P-201ENST00000364065 TTLL13PA6NNM8 815 aa10.74□□□□□ -0.69
RNU6-1090P-201ENST00000364065 TRPC6Q9Y210 931 aa10.74□□□□□ -0.69
RNU6-1090P-201ENST00000364065 TMEM106CQ9BVX2 250 aa10.72□□□□□ -0.69
RNU6-1090P-201ENST00000364065 IER5LQ5T953 404 aa10.7□□□□□ -0.7
RNU6-1090P-201ENST00000364065 TRIM35Q9UPQ4 493 aa10.69□□□□□ -0.7
RNU6-1090P-201ENST00000364065 PCDHB8Q9UN66 801 aa10.68□□□□□ -0.7
RNU6-1090P-201ENST00000364065 SEC24BO95487 1268 aa10.67□□□□□ -0.7
RNU6-1090P-201ENST00000364065 MAMSTRQ6ZN01 415 aa10.66□□□□□ -0.7
RNU6-1090P-201ENST00000364065 GOLGA2Q08379 1002 aa10.63□□□□□ -0.71
RNU6-1090P-201ENST00000364065 PDAP1Q13442 181 aaKnown RBP10.62□□□□□ -0.71
RNU6-1090P-201ENST00000364065 PSEN1P49768 467 aa10.6□□□□□ -0.71
RNU6-1090P-201ENST00000364065 PLCG2P16885 1265 aa10.59□□□□□ -0.71
RNU6-1090P-201ENST00000364065 SCUBE2Q9NQ36 999 aa10.59□□□□□ -0.71
RNU6-1090P-201ENST00000364065 POTEB2H3BUK9 544 aa10.57□□□□□ -0.72
RNU6-1090P-201ENST00000364065 MKRN3Q13064 507 aaKnown RBP10.56□□□□□ -0.72
RNU6-1090P-201ENST00000364065 OTUD5Q96G74 571 aa10.54□□□□□ -0.72
RNU6-1090P-201ENST00000364065 TAOK2Q9UL54 1235 aa10.54□□□□□ -0.72
RNU6-1090P-201ENST00000364065 OCEL1Q9H607 264 aa10.53□□□□□ -0.72
RNU6-1090P-201ENST00000364065 COLQQ9Y215 455 aaPredicted RBP10.53□□□□□ -0.72
RNU6-1090P-201ENST00000364065 POTEFA5A3E0 1075 aa10.52□□□□□ -0.73
RNU6-1090P-201ENST00000364065 RIOK3O14730 519 aaKnown RBP10.51□□□□□ -0.73
RNU6-1090P-201ENST00000364065 IRX5P78411 483 aaPredicted RBP10.51□□□□□ -0.73
RNU6-1090P-201ENST00000364065 VGFO15240 615 aaPredicted RBP10.47□□□□□ -0.73
RNU6-1090P-201ENST00000364065 POTEJP0CG39 1038 aa10.46□□□□□ -0.73
RNU6-1090P-201ENST00000364065 CABP2Q9NPB3 220 aa10.46□□□□□ -0.73
RNU6-1090P-201ENST00000364065 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.45□□□□□ -0.74
RNU6-1090P-201ENST00000364065 ECM2O94769 699 aaPredicted RBP10.44□□□□□ -0.74
RNU6-1090P-201ENST00000364065 L3MBTL3Q96JM7 780 aaPredicted RBP10.43□□□□□ -0.74
RNU6-1090P-201ENST00000364065 RNF25Q96BH1 459 aaPredicted RBP10.4□□□□□ -0.74
RNU6-1090P-201ENST00000364065 G3V3G9 751 aa10.39□□□□□ -0.75
RNU6-1090P-201ENST00000364065 PDCD7Q8N8D1 485 aaKnown RBP10.39□□□□□ -0.75
RNU6-1090P-201ENST00000364065 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP10.37□□□□□ -0.75
RNU6-1090P-201ENST00000364065 C3orf67Q6ZVT6 689 aa10.37□□□□□ -0.75
RNU6-1090P-201ENST00000364065 ZFP91Q96JP5 570 aaPredicted RBP10.37□□□□□ -0.75
RNU6-1090P-201ENST00000364065 EIF2AK3Q9NZJ5 1116 aaKnown RBP10.37□□□□□ -0.75
RNU6-1090P-201ENST00000364065 PKD2Q13563 968 aa10.35□□□□□ -0.75
RNU6-1090P-201ENST00000364065 ILDR1Q86SU0 546 aaPredicted RBP10.35□□□□□ -0.75
RNU6-1090P-201ENST00000364065 SLAIN1Q8ND83 568 aa10.35□□□□□ -0.75
RNU6-1090P-201ENST00000364065 SOX12O15370 315 aa10.34□□□□□ -0.75
RNU6-1090P-201ENST00000364065 EFCAB3Q8N7B9 438 aa10.33□□□□□ -0.76
RNU6-1090P-201ENST00000364065 STK25O00506 426 aa10.3□□□□□ -0.76
RNU6-1090P-201ENST00000364065 BCL11BQ9C0K0 894 aaPredicted RBP10.3□□□□□ -0.76
RNU6-1090P-201ENST00000364065 SNPHO15079 494 aa10.29□□□□□ -0.76
RNU6-1090P-201ENST00000364065 STK24Q9Y6E0 443 aa10.29□□□□□ -0.76
RNU6-1090P-201ENST00000364065 BOLA1Q9Y3E2 137 aa10.28□□□□□ -0.76
RNU6-1090P-201ENST00000364065 RGL2O15211 777 aa10.27□□□□□ -0.77
RNU6-1090P-201ENST00000364065 NLRP6P59044 892 aa10.25□□□□□ -0.77
RNU6-1090P-201ENST00000364065 FAM163AQ96GL9 167 aaPredicted RBP10.25□□□□□ -0.77
RNU6-1090P-201ENST00000364065 DPY19L2Q6NUT2 758 aa10.23□□□□□ -0.77
RNU6-1090P-201ENST00000364065 POTEMA6NI47 508 aa10.2□□□□□ -0.78
RNU6-1090P-201ENST00000364065 PHF8Q9UPP1 1060 aa10.2□□□□□ -0.78
RNU6-1090P-201ENST00000364065 POTEGQ6S5H5 508 aa10.18□□□□□ -0.78
RNU6-1090P-201ENST00000364065 TMEM121BQ9BXQ6 578 aaPredicted RBP10.18□□□□□ -0.78
RNU6-1090P-201ENST00000364065 MICALL2Q8IY33 904 aa10.15□□□□□ -0.78
RNU6-1090P-201ENST00000364065 PCDH10Q9P2E7 1040 aa10.15□□□□□ -0.78
RNU6-1090P-201ENST00000364065 HS6ST3Q8IZP7 471 aa10.14□□□□□ -0.79
RNU6-1090P-201ENST00000364065 MS4A4AQ96JQ5 239 aa10.14□□□□□ -0.79
RNU6-1090P-201ENST00000364065 FBXO22Q8NEZ5 403 aa10.13□□□□□ -0.79
RNU6-1090P-201ENST00000364065 MFRPQ9BY79 579 aa10.13□□□□□ -0.79
RNU6-1090P-201ENST00000364065 ST18O60284 1047 aa10.11□□□□□ -0.79
RNU6-1090P-201ENST00000364065 LCE2DQ5TA82 110 aaPredicted RBP10.11□□□□□ -0.79
RNU6-1090P-201ENST00000364065 CHGAP10645 457 aaKnown RBP10.09□□□□□ -0.79
RNU6-1090P-201ENST00000364065 RYDENQ9NUL5 291 aaKnown RBP10.09□□□□□ -0.79
RNU6-1090P-201ENST00000364065 DOK7Q18PE1 504 aa10.08□□□□□ -0.8
RNU6-1090P-201ENST00000364065 RIMBP2O15034 1052 aa10.07□□□□□ -0.8
RNU6-1090P-201ENST00000364065 ZNF710Q8N1W2 664 aa10.05□□□□□ -0.8
RNU6-1090P-201ENST00000364065 DCAF8L2P0C7V8 631 aa10.02□□□□□ -0.81
RNU6-1090P-201ENST00000364065 DNAJC5Q9H3Z4 198 aa10.02□□□□□ -0.81
RNU6-1090P-201ENST00000364065 EMP3P54852 163 aa10□□□□□ -0.81
RNU6-1090P-201ENST00000364065 ZSWIM6Q9HCJ5 1215 aa9.99□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms