RNA–Protein interactions for RNA: ENST00000363015.1

RNU6-330P-201, Transcript of RNA, U6 small nuclear 330, pseudogene, humanhuman

BASIC

Gene RNU6-330P, Length 107 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-330P-201ENST00000363015 SNPHO15079 494 aa4.23□□□□□ -1.73
RNU6-330P-201ENST00000363015 PABPN1Q86U42 306 aaKnown RBP eCLIP4.23□□□□□ -1.73
RNU6-330P-201ENST00000363015 SLAIN1Q8ND83 568 aa4.23□□□□□ -1.73
RNU6-330P-201ENST00000363015 SEC24BO95487 1268 aa4.21□□□□□ -1.74
RNU6-330P-201ENST00000363015 ATN1P54259 1190 aaPredicted RBP4.17□□□□□ -1.74
RNU6-330P-201ENST00000363015 RNF166Q96A37 237 aaPredicted RBP4.17□□□□□ -1.74
RNU6-330P-201ENST00000363015 MARVELD3Q96A59 401 aa4.17□□□□□ -1.74
RNU6-330P-201ENST00000363015 MS4A3Q96HJ5 214 aa4.17□□□□□ -1.74
RNU6-330P-201ENST00000363015 NPM1P06748 294 aaKnown RBP eCLIP4.15□□□□□ -1.75
RNU6-330P-201ENST00000363015 EMP3P54852 163 aa4.14□□□□□ -1.75
RNU6-330P-201ENST00000363015 POTEFA5A3E0 1075 aa4.13□□□□□ -1.75
RNU6-330P-201ENST00000363015 KRTAP3-3Q9BYR6 98 aa4.13□□□□□ -1.75
RNU6-330P-201ENST00000363015 KRTAP3-2Q9BYR7 98 aa4.13□□□□□ -1.75
RNU6-330P-201ENST00000363015 HS3ST6Q96QI5 342 aa4.09□□□□□ -1.75
RNU6-330P-201ENST00000363015 CREBZFQ9NS37 354 aa4.09□□□□□ -1.75
RNU6-330P-201ENST00000363015 MYT1LQ9UL68 1186 aa4.09□□□□□ -1.75
RNU6-330P-201ENST00000363015 COLQQ9Y215 455 aaPredicted RBP4.09□□□□□ -1.75
RNU6-330P-201ENST00000363015 IER5LQ5T953 404 aa4.08□□□□□ -1.76
RNU6-330P-201ENST00000363015 FAM205CA6NFA0 338 aa4.07□□□□□ -1.76
RNU6-330P-201ENST00000363015 BMP2KQ9NSY1 1161 aaPredicted RBP4.07□□□□□ -1.76
RNU6-330P-201ENST00000363015 STAG3Q9UJ98 1225 aa4.07□□□□□ -1.76
RNU6-330P-201ENST00000363015 TIE1P35590 1138 aa4.05□□□□□ -1.76
RNU6-330P-201ENST00000363015 MKRN4PQ13434 485 aaPredicted RBP4.04□□□□□ -1.76
RNU6-330P-201ENST00000363015 PTGER2P43116 358 aa4.03□□□□□ -1.76
RNU6-330P-201ENST00000363015 EIF2AK3Q9NZJ5 1116 aaKnown RBP4.03□□□□□ -1.76
RNU6-330P-201ENST00000363015 PLCG2P16885 1265 aa4.02□□□□□ -1.77
RNU6-330P-201ENST00000363015 PLA2G2EQ9NZK7 142 aa4.02□□□□□ -1.77
RNU6-330P-201ENST00000363015 FOXD4L1Q9NU39 408 aa4.01□□□□□ -1.77
RNU6-330P-201ENST00000363015 ATXN8OSP0DMR3 200 aa4□□□□□ -1.77
RNU6-330P-201ENST00000363015 POTEB3A0JP26 581 aa3.99□□□□□ -1.77
RNU6-330P-201ENST00000363015 KCNA4P22459 653 aa3.99□□□□□ -1.77
RNU6-330P-201ENST00000363015 POTEBQ6S5H4 581 aa3.99□□□□□ -1.77
RNU6-330P-201ENST00000363015 IRX2Q9BZI1 471 aaPredicted RBP3.99□□□□□ -1.77
RNU6-330P-201ENST00000363015 TTLL13PA6NNM8 815 aa3.98□□□□□ -1.77
RNU6-330P-201ENST00000363015 KIF12Q96FN5 646 aa3.97□□□□□ -1.77
RNU6-330P-201ENST00000363015 TSPYL2Q9H2G4 693 aaPredicted RBP3.97□□□□□ -1.77
RNU6-330P-201ENST00000363015 TRIM35Q9UPQ4 493 aa3.97□□□□□ -1.77
RNU6-330P-201ENST00000363015 RGS20O76081 388 aa3.93□□□□□ -1.78
RNU6-330P-201ENST00000363015 TRPC6Q9Y210 931 aa3.93□□□□□ -1.78
RNU6-330P-201ENST00000363015 CCDC61Q9Y6R9 512 aa3.93□□□□□ -1.78
RNU6-330P-201ENST00000363015 ERBB3P21860 1342 aa3.93□□□□□ -1.78
RNU6-330P-201ENST00000363015 C3orf67Q6ZVT6 689 aa3.92□□□□□ -1.78
RNU6-330P-201ENST00000363015 MAP3K13O43283 966 aa3.9□□□□□ -1.79
RNU6-330P-201ENST00000363015 OCEL1Q9H607 264 aa3.9□□□□□ -1.79
RNU6-330P-201ENST00000363015 HCSTQ9UBK5 93 aa3.9□□□□□ -1.79
RNU6-330P-201ENST00000363015 MNX1P50219 401 aaPredicted RBP3.89□□□□□ -1.79
RNU6-330P-201ENST00000363015 ZNF710Q8N1W2 664 aa3.88□□□□□ -1.79
RNU6-330P-201ENST00000363015 IRX5P78411 483 aaPredicted RBP3.86□□□□□ -1.79
RNU6-330P-201ENST00000363015 Q6ZNB5 142 aa3.86□□□□□ -1.79
RNU6-330P-201ENST00000363015 SGIP1Q9BQI5 828 aa3.86□□□□□ -1.79
RNU6-330P-201ENST00000363015 ANKRD13DQ6ZTN6 518 aa3.85□□□□□ -1.79
RNU6-330P-201ENST00000363015 HOXB1P14653 301 aaPredicted RBP3.84□□□□□ -1.79
RNU6-330P-201ENST00000363015 TMEM106CQ9BVX2 250 aa3.84□□□□□ -1.79
RNU6-330P-201ENST00000363015 VARS2Q5ST30 1063 aaKnown RBP3.83□□□□□ -1.8
RNU6-330P-201ENST00000363015 ZNF687Q8N1G0 1237 aa3.83□□□□□ -1.8
RNU6-330P-201ENST00000363015 L3MBTL3Q96JM7 780 aaPredicted RBP3.83□□□□□ -1.8
RNU6-330P-201ENST00000363015 RIMBP2O15034 1052 aa3.82□□□□□ -1.8
RNU6-330P-201ENST00000363015 PCDHB13Q9Y5F0 798 aa3.82□□□□□ -1.8
RNU6-330P-201ENST00000363015 DOK7Q18PE1 504 aa3.8□□□□□ -1.8
RNU6-330P-201ENST00000363015 LOC100996750A0A140TA64 210 aa3.77□□□□□ -1.81
RNU6-330P-201ENST00000363015 KRTAP4-6Q9BYQ5 205 aa3.77□□□□□ -1.81
RNU6-330P-201ENST00000363015 PLEKHG5O94827 1062 aa3.75□□□□□ -1.81
RNU6-330P-201ENST00000363015 G3V3G9 751 aa3.74□□□□□ -1.81
RNU6-330P-201ENST00000363015 HOXB3P14651 431 aaPredicted RBP3.74□□□□□ -1.81
RNU6-330P-201ENST00000363015 LSM11P83369 360 aaKnown RBP eCLIP3.74□□□□□ -1.81
RNU6-330P-201ENST00000363015 LAPTM4AQ15012 233 aa3.74□□□□□ -1.81
RNU6-330P-201ENST00000363015 DCAF8Q5TAQ9 597 aa3.74□□□□□ -1.81
RNU6-330P-201ENST00000363015 IFNL1Q8IU54 200 aa3.72□□□□□ -1.81
RNU6-330P-201ENST00000363015 SLC4A1APQ9BWU0 796 aaKnown RBP3.72□□□□□ -1.81
RNU6-330P-201ENST00000363015 GOLGA2Q08379 1002 aa3.71□□□□□ -1.82
RNU6-330P-201ENST00000363015 IFFO2Q5TF58 517 aa3.71□□□□□ -1.82
RNU6-330P-201ENST00000363015 TRAF7Q6Q0C0 670 aa3.71□□□□□ -1.82
RNU6-330P-201ENST00000363015 ZSWIM6Q9HCJ5 1215 aa3.71□□□□□ -1.82
RNU6-330P-201ENST00000363015 A0A0G2JS52 829 aa3.68□□□□□ -1.82
RNU6-330P-201ENST00000363015 PBX2P40425 430 aa3.68□□□□□ -1.82
RNU6-330P-201ENST00000363015 MKRN3Q13064 507 aaKnown RBP3.68□□□□□ -1.82
RNU6-330P-201ENST00000363015 ZNF787Q6DD87 383 aa3.68□□□□□ -1.82
RNU6-330P-201ENST00000363015 RASEFQ8IZ41 740 aa3.67□□□□□ -1.82
RNU6-330P-201ENST00000363015 PDCD7Q8N8D1 485 aaKnown RBP3.67□□□□□ -1.82
RNU6-330P-201ENST00000363015 ZNF775Q96BV0 537 aaPredicted RBP3.65□□□□□ -1.83
RNU6-330P-201ENST00000363015 STAC3Q96MF2 364 aa3.65□□□□□ -1.83
RNU6-330P-201ENST00000363015 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP3.64□□□□□ -1.83
RNU6-330P-201ENST00000363015 SPDYE4A6NLX3 237 aa3.62□□□□□ -1.83
RNU6-330P-201ENST00000363015 ZNF316A6NFI3 1004 aaPredicted RBP3.61□□□□□ -1.83
RNU6-330P-201ENST00000363015 KCTD12Q96CX2 325 aaKnown RBP3.61□□□□□ -1.83
RNU6-330P-201ENST00000363015 STK17AQ9UEE5 414 aa3.61□□□□□ -1.83
RNU6-330P-201ENST00000363015 BOLA1Q9Y3E2 137 aa3.61□□□□□ -1.83
RNU6-330P-201ENST00000363015 GFRA3O60609 400 aa3.6□□□□□ -1.83
RNU6-330P-201ENST00000363015 GPR153Q6NV75 609 aa3.6□□□□□ -1.83
RNU6-330P-201ENST00000363015 ADGRD1Q6QNK2 874 aa3.59□□□□□ -1.83
RNU6-330P-201ENST00000363015 ZBTB22O15209 634 aa3.58□□□□□ -1.84
RNU6-330P-201ENST00000363015 MIER1Q8N108 512 aa3.58□□□□□ -1.84
RNU6-330P-201ENST00000363015 FAM212AQ96EL1 285 aa3.58□□□□□ -1.84
RNU6-330P-201ENST00000363015 PTPN5P54829 565 aa3.57□□□□□ -1.84
RNU6-330P-201ENST00000363015 ZBTB47Q9UFB7 747 aaPredicted RBP3.56□□□□□ -1.84
RNU6-330P-201ENST00000363015 TK2O00142 265 aa3.55□□□□□ -1.84
RNU6-330P-201ENST00000363015 LCE2BO14633 110 aa3.55□□□□□ -1.84
RNU6-330P-201ENST00000363015 SUZ12Q15022 739 aaKnown RBP3.55□□□□□ -1.84
RNU6-330P-201ENST00000363015 ARSIQ5FYB1 569 aa3.55□□□□□ -1.84
RNU6-330P-201ENST00000363015 NRG2O14511 850 aaPredicted RBP3.54□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms