RNA–Protein interactions for RNA: ENST00000362944.1

RNU6-1260P-201, Transcript of RNA, U6 small nuclear 1260, pseudogene, humanhuman

BASIC

Gene RNU6-1260P, Length 107 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1260P-201ENST00000362944 C7P10643 843 aa3.59□□□□□ -1.83
RNU6-1260P-201ENST00000362944 PCDH10Q9P2E7 1040 aa3.59□□□□□ -1.83
RNU6-1260P-201ENST00000362944 STAG3Q9UJ98 1225 aa3.59□□□□□ -1.83
RNU6-1260P-201ENST00000362944 ATN1P54259 1190 aaPredicted RBP3.58□□□□□ -1.84
RNU6-1260P-201ENST00000362944 SLC39A7Q92504 469 aa3.58□□□□□ -1.84
RNU6-1260P-201ENST00000362944 TSPYL2Q9H2G4 693 aaPredicted RBP3.58□□□□□ -1.84
RNU6-1260P-201ENST00000362944 TRPC6Q9Y210 931 aa3.58□□□□□ -1.84
RNU6-1260P-201ENST00000362944 POTEFA5A3E0 1075 aa3.57□□□□□ -1.84
RNU6-1260P-201ENST00000362944 SPDYE4A6NLX3 237 aa3.57□□□□□ -1.84
RNU6-1260P-201ENST00000362944 NPM1P06748 294 aaKnown RBP eCLIP3.56□□□□□ -1.84
RNU6-1260P-201ENST00000362944 MAMSTRQ6ZN01 415 aa3.56□□□□□ -1.84
RNU6-1260P-201ENST00000362944 SCUBE2Q9NQ36 999 aa3.56□□□□□ -1.84
RNU6-1260P-201ENST00000362944 CDAN1Q8IWY9 1227 aa3.54□□□□□ -1.84
RNU6-1260P-201ENST00000362944 CSRNP3Q8WYN3 585 aa3.54□□□□□ -1.84
RNU6-1260P-201ENST00000362944 BMP2KQ9NSY1 1161 aaPredicted RBP3.54□□□□□ -1.84
RNU6-1260P-201ENST00000362944 COLQQ9Y215 455 aaPredicted RBP3.54□□□□□ -1.84
RNU6-1260P-201ENST00000362944 KIF12Q96FN5 646 aa3.53□□□□□ -1.84
RNU6-1260P-201ENST00000362944 CCDC61Q9Y6R9 512 aa3.53□□□□□ -1.84
RNU6-1260P-201ENST00000362944 MAP3K13O43283 966 aa3.51□□□□□ -1.85
RNU6-1260P-201ENST00000362944 TTLL13PA6NNM8 815 aa3.5□□□□□ -1.85
RNU6-1260P-201ENST00000362944 ST18O60284 1047 aa3.5□□□□□ -1.85
RNU6-1260P-201ENST00000362944 SEC24BO95487 1268 aa3.5□□□□□ -1.85
RNU6-1260P-201ENST00000362944 TIE1P35590 1138 aa3.48□□□□□ -1.85
RNU6-1260P-201ENST00000362944 RASEFQ8IZ41 740 aa3.48□□□□□ -1.85
RNU6-1260P-201ENST00000362944 SLAIN1Q8ND83 568 aa3.48□□□□□ -1.85
RNU6-1260P-201ENST00000362944 TRIM35Q9UPQ4 493 aa3.48□□□□□ -1.85
RNU6-1260P-201ENST00000362944 MMRN1Q13201 1228 aa3.47□□□□□ -1.85
RNU6-1260P-201ENST00000362944 SPNS2Q8IVW8 549 aa3.46□□□□□ -1.86
RNU6-1260P-201ENST00000362944 MARVELD3Q96A59 401 aa3.45□□□□□ -1.86
RNU6-1260P-201ENST00000362944 MIER1Q8N108 512 aa3.44□□□□□ -1.86
RNU6-1260P-201ENST00000362944 PCDHB13Q9Y5F0 798 aa3.44□□□□□ -1.86
RNU6-1260P-201ENST00000362944 IFNL1Q8IU54 200 aa3.43□□□□□ -1.86
RNU6-1260P-201ENST00000362944 EHMT2Q96KQ7 1210 aa3.43□□□□□ -1.86
RNU6-1260P-201ENST00000362944 IER5LQ5T953 404 aa3.42□□□□□ -1.86
RNU6-1260P-201ENST00000362944 PROM2Q8N271 834 aa3.42□□□□□ -1.86
RNU6-1260P-201ENST00000362944 TMEM106CQ9BVX2 250 aa3.42□□□□□ -1.86
RNU6-1260P-201ENST00000362944 PLCG2P16885 1265 aa3.41□□□□□ -1.86
RNU6-1260P-201ENST00000362944 IRX5P78411 483 aaPredicted RBP3.4□□□□□ -1.87
RNU6-1260P-201ENST00000362944 POTEB3A0JP26 581 aa3.39□□□□□ -1.87
RNU6-1260P-201ENST00000362944 PLEKHG5O94827 1062 aa3.39□□□□□ -1.87
RNU6-1260P-201ENST00000362944 POTEBQ6S5H4 581 aa3.39□□□□□ -1.87
RNU6-1260P-201ENST00000362944 NUBP1P53384 320 aa3.38□□□□□ -1.87
RNU6-1260P-201ENST00000362944 PLCD3Q8N3E9 789 aa3.38□□□□□ -1.87
RNU6-1260P-201ENST00000362944 SGIP1Q9BQI5 828 aa3.38□□□□□ -1.87
RNU6-1260P-201ENST00000362944 TMEM121BQ9BXQ6 578 aaPredicted RBP3.38□□□□□ -1.87
RNU6-1260P-201ENST00000362944 EMP3P54852 163 aa3.37□□□□□ -1.87
RNU6-1260P-201ENST00000362944 KRTAP3-3Q9BYR6 98 aa3.37□□□□□ -1.87
RNU6-1260P-201ENST00000362944 KRTAP3-2Q9BYR7 98 aa3.37□□□□□ -1.87
RNU6-1260P-201ENST00000362944 OCEL1Q9H607 264 aa3.37□□□□□ -1.87
RNU6-1260P-201ENST00000362944 EIF2AK3Q9NZJ5 1116 aaKnown RBP3.37□□□□□ -1.87
RNU6-1260P-201ENST00000362944 FAM205CA6NFA0 338 aa3.36□□□□□ -1.87
RNU6-1260P-201ENST00000362944 PYGBP11216 843 aa3.36□□□□□ -1.87
RNU6-1260P-201ENST00000362944 PCDHB8Q9UN66 801 aa3.36□□□□□ -1.87
RNU6-1260P-201ENST00000362944 SNPHO15079 494 aa3.35□□□□□ -1.87
RNU6-1260P-201ENST00000362944 HS3ST6Q96QI5 342 aa3.35□□□□□ -1.87
RNU6-1260P-201ENST00000362944 PDCD7Q8N8D1 485 aaKnown RBP3.34□□□□□ -1.87
RNU6-1260P-201ENST00000362944 FAM212AQ96EL1 285 aa3.34□□□□□ -1.87
RNU6-1260P-201ENST00000362944 DCAF8Q5TAQ9 597 aa3.32□□□□□ -1.88
RNU6-1260P-201ENST00000362944 C3orf67Q6ZVT6 689 aa3.32□□□□□ -1.88
RNU6-1260P-201ENST00000362944 DPY19L2Q6NUT2 758 aa3.3□□□□□ -1.88
RNU6-1260P-201ENST00000362944 ZBTB47Q9UFB7 747 aaPredicted RBP3.3□□□□□ -1.88
RNU6-1260P-201ENST00000362944 HOXB3P14651 431 aaPredicted RBP3.29□□□□□ -1.88
RNU6-1260P-201ENST00000362944 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP3.29□□□□□ -1.88
RNU6-1260P-201ENST00000362944 GOLGA2Q08379 1002 aa3.28□□□□□ -1.88
RNU6-1260P-201ENST00000362944 MKRN3Q13064 507 aaKnown RBP3.28□□□□□ -1.88
RNU6-1260P-201ENST00000362944 L3MBTL3Q96JM7 780 aaPredicted RBP3.28□□□□□ -1.88
RNU6-1260P-201ENST00000362944 RNF166Q96A37 237 aaPredicted RBP3.27□□□□□ -1.89
RNU6-1260P-201ENST00000362944 ERBB3P21860 1342 aa3.26□□□□□ -1.89
RNU6-1260P-201ENST00000362944 VARS2Q5ST30 1063 aaKnown RBP3.25□□□□□ -1.89
RNU6-1260P-201ENST00000362944 ZNF710Q8N1W2 664 aa3.25□□□□□ -1.89
RNU6-1260P-201ENST00000362944 MYT1LQ9UL68 1186 aa3.25□□□□□ -1.89
RNU6-1260P-201ENST00000362944 HOXB1P14653 301 aaPredicted RBP3.24□□□□□ -1.89
RNU6-1260P-201ENST00000362944 PSEN1P49768 467 aa3.24□□□□□ -1.89
RNU6-1260P-201ENST00000362944 BOLA1Q9Y3E2 137 aa3.24□□□□□ -1.89
RNU6-1260P-201ENST00000362944 ZNF467Q7Z7K2 595 aaPredicted RBP3.23□□□□□ -1.89
RNU6-1260P-201ENST00000362944 ILDR1Q86SU0 546 aaPredicted RBP3.23□□□□□ -1.89
RNU6-1260P-201ENST00000362944 CABP2Q9NPB3 220 aa3.23□□□□□ -1.89
RNU6-1260P-201ENST00000362944 FKBP8Q14318 412 aa3.22□□□□□ -1.89
RNU6-1260P-201ENST00000362944 G3V3G9 751 aa3.21□□□□□ -1.9
RNU6-1260P-201ENST00000362944 DOK7Q18PE1 504 aa3.21□□□□□ -1.9
RNU6-1260P-201ENST00000362944 ANKRD13DQ6ZTN6 518 aa3.21□□□□□ -1.9
RNU6-1260P-201ENST00000362944 TMEM92Q6UXU6 159 aa3.2□□□□□ -1.9
RNU6-1260P-201ENST00000362944 KLHL34Q8N239 644 aa3.2□□□□□ -1.9
RNU6-1260P-201ENST00000362944 PDAP1Q13442 181 aaKnown RBP3.19□□□□□ -1.9
RNU6-1260P-201ENST00000362944 GSE1Q14687 1217 aa3.19□□□□□ -1.9
RNU6-1260P-201ENST00000362944 ZNF687Q8N1G0 1237 aa3.19□□□□□ -1.9
RNU6-1260P-201ENST00000362944 KHSRPQ92945 711 aaKnown RBP eCLIP3.19□□□□□ -1.9
RNU6-1260P-201ENST00000362944 RIMBP2O15034 1052 aa3.18□□□□□ -1.9
RNU6-1260P-201ENST00000362944 CHRM1P11229 460 aaPredicted RBP3.18□□□□□ -1.9
RNU6-1260P-201ENST00000362944 GPR153Q6NV75 609 aa3.18□□□□□ -1.9
RNU6-1260P-201ENST00000362944 ARSIQ5FYB1 569 aa3.17□□□□□ -1.9
RNU6-1260P-201ENST00000362944 VASPP50552 380 aaPredicted RBP3.16□□□□□ -1.9
RNU6-1260P-201ENST00000362944 MICALL2Q8IY33 904 aa3.16□□□□□ -1.9
RNU6-1260P-201ENST00000362944 EFCAB3Q8N7B9 438 aa3.16□□□□□ -1.9
RNU6-1260P-201ENST00000362944 PLA2G2EQ9NZK7 142 aa3.16□□□□□ -1.9
RNU6-1260P-201ENST00000362944 CIZ1Q9ULV3 898 aaPredicted RBP3.16□□□□□ -1.9
RNU6-1260P-201ENST00000362944 AXIN2Q9Y2T1 843 aa3.15□□□□□ -1.91
RNU6-1260P-201ENST00000362944 PTGER2P43116 358 aa3.14□□□□□ -1.91
RNU6-1260P-201ENST00000362944 LSM11P83369 360 aaKnown RBP eCLIP3.14□□□□□ -1.91
RNU6-1260P-201ENST00000362944 POTEEQ6S8J3 1075 aa3.14□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms