RNA–Protein interactions for RNA: ENST00000362700.1

RNU6-228P-201, Transcript of RNA, U6 small nuclear 228, pseudogene, humanhuman

BASIC

Gene RNU6-228P, Length 106 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-228P-201ENST00000362700 PABPN1Q86U42 306 aaKnown RBP eCLIP6.66□□□□□ -1.34
RNU6-228P-201ENST00000362700 SLAIN1Q8ND83 568 aa6.63□□□□□ -1.35
RNU6-228P-201ENST00000362700 POTEFA5A3E0 1075 aa6.62□□□□□ -1.35
RNU6-228P-201ENST00000362700 MS4A3Q96HJ5 214 aa6.62□□□□□ -1.35
RNU6-228P-201ENST00000362700 ATN1P54259 1190 aaPredicted RBP6.61□□□□□ -1.35
RNU6-228P-201ENST00000362700 MARVELD3Q96A59 401 aa6.59□□□□□ -1.35
RNU6-228P-201ENST00000362700 SEC24BO95487 1268 aa6.57□□□□□ -1.36
RNU6-228P-201ENST00000362700 KRTAP3-3Q9BYR6 98 aa6.56□□□□□ -1.36
RNU6-228P-201ENST00000362700 KRTAP3-2Q9BYR7 98 aa6.56□□□□□ -1.36
RNU6-228P-201ENST00000362700 RNF166Q96A37 237 aaPredicted RBP6.54□□□□□ -1.36
RNU6-228P-201ENST00000362700 SNPHO15079 494 aa6.53□□□□□ -1.36
RNU6-228P-201ENST00000362700 EMP3P54852 163 aa6.5□□□□□ -1.37
RNU6-228P-201ENST00000362700 CREBZFQ9NS37 354 aa6.49□□□□□ -1.37
RNU6-228P-201ENST00000362700 COLQQ9Y215 455 aaPredicted RBP6.49□□□□□ -1.37
RNU6-228P-201ENST00000362700 MKRN4PQ13434 485 aaPredicted RBP6.47□□□□□ -1.37
RNU6-228P-201ENST00000362700 HS3ST6Q96QI5 342 aa6.45□□□□□ -1.38
RNU6-228P-201ENST00000362700 NPM1P06748 294 aaKnown RBP eCLIP6.44□□□□□ -1.38
RNU6-228P-201ENST00000362700 BMP2KQ9NSY1 1161 aaPredicted RBP6.44□□□□□ -1.38
RNU6-228P-201ENST00000362700 FAM205CA6NFA0 338 aa6.41□□□□□ -1.38
RNU6-228P-201ENST00000362700 MYT1LQ9UL68 1186 aa6.4□□□□□ -1.38
RNU6-228P-201ENST00000362700 KCNA4P22459 653 aa6.39□□□□□ -1.39
RNU6-228P-201ENST00000362700 POTEB3A0JP26 581 aa6.38□□□□□ -1.39
RNU6-228P-201ENST00000362700 POTEBQ6S5H4 581 aa6.38□□□□□ -1.39
RNU6-228P-201ENST00000362700 TIE1P35590 1138 aa6.37□□□□□ -1.39
RNU6-228P-201ENST00000362700 IER5LQ5T953 404 aa6.37□□□□□ -1.39
RNU6-228P-201ENST00000362700 FOXD4L1Q9NU39 408 aa6.35□□□□□ -1.39
RNU6-228P-201ENST00000362700 TRPC6Q9Y210 931 aa6.31□□□□□ -1.4
RNU6-228P-201ENST00000362700 STAG3Q9UJ98 1225 aa6.3□□□□□ -1.4
RNU6-228P-201ENST00000362700 TTLL13PA6NNM8 815 aa6.29□□□□□ -1.4
RNU6-228P-201ENST00000362700 EIF2AK3Q9NZJ5 1116 aaKnown RBP6.29□□□□□ -1.4
RNU6-228P-201ENST00000362700 PLCG2P16885 1265 aa6.28□□□□□ -1.4
RNU6-228P-201ENST00000362700 PLA2G2EQ9NZK7 142 aa6.28□□□□□ -1.4
RNU6-228P-201ENST00000362700 KIF12Q96FN5 646 aa6.27□□□□□ -1.41
RNU6-228P-201ENST00000362700 TRIM35Q9UPQ4 493 aa6.27□□□□□ -1.41
RNU6-228P-201ENST00000362700 ATXN8OSP0DMR3 200 aa6.26□□□□□ -1.41
RNU6-228P-201ENST00000362700 TSPYL2Q9H2G4 693 aaPredicted RBP6.25□□□□□ -1.41
RNU6-228P-201ENST00000362700 PTGER2P43116 358 aa6.24□□□□□ -1.41
RNU6-228P-201ENST00000362700 CCDC61Q9Y6R9 512 aa6.23□□□□□ -1.41
RNU6-228P-201ENST00000362700 MNX1P50219 401 aaPredicted RBP6.21□□□□□ -1.42
RNU6-228P-201ENST00000362700 IRX2Q9BZI1 471 aaPredicted RBP6.2□□□□□ -1.42
RNU6-228P-201ENST00000362700 MAP3K13O43283 966 aa6.18□□□□□ -1.42
RNU6-228P-201ENST00000362700 ERBB3P21860 1342 aa6.14□□□□□ -1.43
RNU6-228P-201ENST00000362700 IRX5P78411 483 aaPredicted RBP6.12□□□□□ -1.43
RNU6-228P-201ENST00000362700 C3orf67Q6ZVT6 689 aa6.11□□□□□ -1.43
RNU6-228P-201ENST00000362700 OCEL1Q9H607 264 aa6.1□□□□□ -1.43
RNU6-228P-201ENST00000362700 RGS20O76081 388 aa6.06□□□□□ -1.44
RNU6-228P-201ENST00000362700 HCSTQ9UBK5 93 aa6.05□□□□□ -1.44
RNU6-228P-201ENST00000362700 HOXB1P14653 301 aaPredicted RBP6.04□□□□□ -1.44
RNU6-228P-201ENST00000362700 VARS2Q5ST30 1063 aaKnown RBP6.04□□□□□ -1.44
RNU6-228P-201ENST00000362700 ZNF710Q8N1W2 664 aa6.03□□□□□ -1.44
RNU6-228P-201ENST00000362700 TMEM106CQ9BVX2 250 aa6.03□□□□□ -1.44
RNU6-228P-201ENST00000362700 ANKRD13DQ6ZTN6 518 aa6.02□□□□□ -1.45
RNU6-228P-201ENST00000362700 SGIP1Q9BQI5 828 aa6.02□□□□□ -1.45
RNU6-228P-201ENST00000362700 Q6ZNB5 142 aa6.01□□□□□ -1.45
RNU6-228P-201ENST00000362700 PCDHB13Q9Y5F0 798 aa6.01□□□□□ -1.45
RNU6-228P-201ENST00000362700 ZNF687Q8N1G0 1237 aa6□□□□□ -1.45
RNU6-228P-201ENST00000362700 L3MBTL3Q96JM7 780 aaPredicted RBP5.96□□□□□ -1.46
RNU6-228P-201ENST00000362700 LOC100996750A0A140TA64 210 aa5.95□□□□□ -1.46
RNU6-228P-201ENST00000362700 KRTAP4-6Q9BYQ5 205 aa5.95□□□□□ -1.46
RNU6-228P-201ENST00000362700 HOXB3P14651 431 aaPredicted RBP5.94□□□□□ -1.46
RNU6-228P-201ENST00000362700 DOK7Q18PE1 504 aa5.92□□□□□ -1.46
RNU6-228P-201ENST00000362700 RIMBP2O15034 1052 aa5.9□□□□□ -1.46
RNU6-228P-201ENST00000362700 IFNL1Q8IU54 200 aa5.9□□□□□ -1.46
RNU6-228P-201ENST00000362700 LSM11P83369 360 aaKnown RBP eCLIP5.88□□□□□ -1.47
RNU6-228P-201ENST00000362700 SLC4A1APQ9BWU0 796 aaKnown RBP5.88□□□□□ -1.47
RNU6-228P-201ENST00000362700 RASEFQ8IZ41 740 aa5.86□□□□□ -1.47
RNU6-228P-201ENST00000362700 PDCD7Q8N8D1 485 aaKnown RBP5.85□□□□□ -1.47
RNU6-228P-201ENST00000362700 ZBTB22O15209 634 aa5.82□□□□□ -1.48
RNU6-228P-201ENST00000362700 A0A0G2JS52 829 aa5.79□□□□□ -1.48
RNU6-228P-201ENST00000362700 IFFO2Q5TF58 517 aa5.78□□□□□ -1.48
RNU6-228P-201ENST00000362700 TRAF7Q6Q0C0 670 aa5.78□□□□□ -1.48
RNU6-228P-201ENST00000362700 ZSWIM6Q9HCJ5 1215 aa5.77□□□□□ -1.49
RNU6-228P-201ENST00000362700 G3V3G9 751 aa5.76□□□□□ -1.49
RNU6-228P-201ENST00000362700 DCAF8Q5TAQ9 597 aa5.76□□□□□ -1.49
RNU6-228P-201ENST00000362700 PLEKHG5O94827 1062 aa5.75□□□□□ -1.49
RNU6-228P-201ENST00000362700 LAPTM4AQ15012 233 aa5.75□□□□□ -1.49
RNU6-228P-201ENST00000362700 GOLGA2Q08379 1002 aa5.74□□□□□ -1.49
RNU6-228P-201ENST00000362700 ZNF775Q96BV0 537 aaPredicted RBP5.74□□□□□ -1.49
RNU6-228P-201ENST00000362700 MKRN3Q13064 507 aaKnown RBP5.73□□□□□ -1.49
RNU6-228P-201ENST00000362700 PBX2P40425 430 aa5.72□□□□□ -1.49
RNU6-228P-201ENST00000362700 ZNF787Q6DD87 383 aa5.72□□□□□ -1.49
RNU6-228P-201ENST00000362700 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP5.72□□□□□ -1.49
RNU6-228P-201ENST00000362700 LCE2BO14633 110 aa5.71□□□□□ -1.5
RNU6-228P-201ENST00000362700 SPDYE4A6NLX3 237 aa5.7□□□□□ -1.5
RNU6-228P-201ENST00000362700 GPR153Q6NV75 609 aa5.69□□□□□ -1.5
RNU6-228P-201ENST00000362700 ZNF316A6NFI3 1004 aaPredicted RBP5.67□□□□□ -1.5
RNU6-228P-201ENST00000362700 KCTD12Q96CX2 325 aaKnown RBP5.67□□□□□ -1.5
RNU6-228P-201ENST00000362700 ADGRD1Q6QNK2 874 aa5.65□□□□□ -1.5
RNU6-228P-201ENST00000362700 BOLA1Q9Y3E2 137 aa5.65□□□□□ -1.5
RNU6-228P-201ENST00000362700 AXIN2Q9Y2T1 843 aa5.62□□□□□ -1.51
RNU6-228P-201ENST00000362700 GFRA3O60609 400 aa5.61□□□□□ -1.51
RNU6-228P-201ENST00000362700 PTPN5P54829 565 aa5.61□□□□□ -1.51
RNU6-228P-201ENST00000362700 ARSIQ5FYB1 569 aa5.6□□□□□ -1.51
RNU6-228P-201ENST00000362700 FAM212AQ96EL1 285 aa5.6□□□□□ -1.51
RNU6-228P-201ENST00000362700 STAC3Q96MF2 364 aa5.6□□□□□ -1.51
RNU6-228P-201ENST00000362700 DPY19L2Q6NUT2 758 aa5.59□□□□□ -1.51
RNU6-228P-201ENST00000362700 MIER1Q8N108 512 aa5.59□□□□□ -1.51
RNU6-228P-201ENST00000362700 PCDHB8Q9UN66 801 aa5.59□□□□□ -1.51
RNU6-228P-201ENST00000362700 POTEEQ6S8J3 1075 aa5.58□□□□□ -1.52
RNU6-228P-201ENST00000362700 STK17AQ9UEE5 414 aa5.57□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 8.4 ms