RNA–Protein interactions for RNA: ENST00000361917.5

COL11A2-202, Transcript of collagen type XI alpha 2 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL11A2, Length 6,104 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A2-202ENST00000361917 MIER1Q8N108 512 aa19.72■□□□□ 0.75
COL11A2-202ENST00000361917 RRP7BPQ9NSQ0 103 aa19.7■□□□□ 0.74
COL11A2-202ENST00000361917 GLIPR1L2Q4G1C9 344 aa19.7■□□□□ 0.74
COL11A2-202ENST00000361917 SENP3-EIF4A1A0A087X0R7 540 aa19.68■□□□□ 0.74
COL11A2-202ENST00000361917 CHMP7Q8WUX9 453 aaPredicted RBP19.67■□□□□ 0.74
COL11A2-202ENST00000361917 PPP1R15AO75807 674 aaPredicted RBP19.65■□□□□ 0.74
COL11A2-202ENST00000361917 EIF4G2P78344 907 aaKnown RBP eCLIP19.65■□□□□ 0.74
COL11A2-202ENST00000361917 CDK11BP21127 795 aaKnown RBP19.65■□□□□ 0.74
COL11A2-202ENST00000361917 KCNH8Q96L42 1107 aa19.63■□□□□ 0.73
COL11A2-202ENST00000361917 RGL3Q3MIN7 710 aa19.59■□□□□ 0.73
COL11A2-202ENST00000361917 BECN1Q14457 450 aa19.57■□□□□ 0.72
COL11A2-202ENST00000361917 NCLP19338 710 aaKnown RBP19.57■□□□□ 0.72
COL11A2-202ENST00000361917 CLIP1P30622 1438 aa19.56■□□□□ 0.72
COL11A2-202ENST00000361917 DDRGK1Q96HY6 314 aa19.55■□□□□ 0.72
COL11A2-202ENST00000361917 TPRNQ4KMQ1 711 aa19.55■□□□□ 0.72
COL11A2-202ENST00000361917 PPM1GO15355 546 aaPredicted RBP19.53■□□□□ 0.72
COL11A2-202ENST00000361917 TRIM44Q96DX7 344 aaPredicted RBP19.51■□□□□ 0.71
COL11A2-202ENST00000361917 HAP1P54257 671 aaPredicted RBP19.49■□□□□ 0.71
COL11A2-202ENST00000361917 CFAP53Q96M91 514 aa19.48■□□□□ 0.71
COL11A2-202ENST00000361917 GOLGA6L22H0YM25 854 aa19.47■□□□□ 0.71
COL11A2-202ENST00000361917 LAS1LQ9Y4W2 734 aaKnown RBP19.47■□□□□ 0.71
COL11A2-202ENST00000361917 KNSTRNQ9Y448 316 aa19.45■□□□□ 0.7
COL11A2-202ENST00000361917 ARID4BQ4LE39 1312 aaPredicted RBP19.45■□□□□ 0.7
COL11A2-202ENST00000361917 ZCCHC6Q5VYS8 1495 aaKnown RBP19.45■□□□□ 0.7
COL11A2-202ENST00000361917 PLEKHD1A6NEE1 506 aa19.45■□□□□ 0.7
COL11A2-202ENST00000361917 NEUROD2Q15784 382 aa19.45■□□□□ 0.7
COL11A2-202ENST00000361917 FTSJ3Q8IY81 847 aaKnown RBP19.45■□□□□ 0.7
COL11A2-202ENST00000361917 TULP1O00294 542 aaPredicted RBP19.43■□□□□ 0.7
COL11A2-202ENST00000361917 CASC1Q6TDU7 716 aa19.43■□□□□ 0.7
COL11A2-202ENST00000361917 RSF1Q96T23 1441 aaPredicted RBP19.43■□□□□ 0.7
COL11A2-202ENST00000361917 SUPT16HQ9Y5B9 1047 aaKnown RBP19.42■□□□□ 0.7
COL11A2-202ENST00000361917 MYO15BQ96JP2 1530 aa19.41■□□□□ 0.7
COL11A2-202ENST00000361917 PTMAP06454 111 aaKnown RBP19.41■□□□□ 0.7
COL11A2-202ENST00000361917 CARD11Q9BXL7 1154 aa19.4■□□□□ 0.7
COL11A2-202ENST00000361917 ZRSR1Q15695 479 aaKnown RBP19.4■□□□□ 0.7
COL11A2-202ENST00000361917 TAOK2Q9UL54 1235 aa19.39■□□□□ 0.7
COL11A2-202ENST00000361917 ANP32EQ9BTT0 268 aa19.37■□□□□ 0.69
COL11A2-202ENST00000361917 CDCA8Q53HL2 280 aa19.37■□□□□ 0.69
COL11A2-202ENST00000361917 MAPK8IP3Q9UPT6 1336 aa19.36■□□□□ 0.69
COL11A2-202ENST00000361917 TNNT2P45379 298 aaPredicted RBP19.36■□□□□ 0.69
COL11A2-202ENST00000361917 CFDP1Q9UEE9 299 aaPredicted RBP19.36■□□□□ 0.69
COL11A2-202ENST00000361917 GOLGA3Q08378 1498 aa19.35■□□□□ 0.69
COL11A2-202ENST00000361917 CEP162Q5TB80 1403 aa19.35■□□□□ 0.69
COL11A2-202ENST00000361917 RB1CC1Q8TDY2 1594 aa19.35■□□□□ 0.69
COL11A2-202ENST00000361917 LMOD2Q6P5Q4 547 aa19.34■□□□□ 0.69
COL11A2-202ENST00000361917 FRAT1Q92837 279 aaPredicted RBP19.33■□□□□ 0.69
COL11A2-202ENST00000361917 DNTTIP2Q5QJE6 756 aaKnown RBP19.33■□□□□ 0.68
COL11A2-202ENST00000361917 RTN4Q9NQC3 1192 aaKnown RBP19.33■□□□□ 0.68
COL11A2-202ENST00000361917 CCDC180Q9P1Z9 1646 aa19.33■□□□□ 0.68
COL11A2-202ENST00000361917 RGS3P49796 1198 aa19.32■□□□□ 0.68
COL11A2-202ENST00000361917 CC2D1BQ5T0F9 858 aaKnown RBP19.31■□□□□ 0.68
COL11A2-202ENST00000361917 POGKQ9P215 609 aa19.3■□□□□ 0.68
COL11A2-202ENST00000361917 NUDCQ9Y266 331 aa19.27■□□□□ 0.68
COL11A2-202ENST00000361917 SIN3AQ96ST3 1273 aa19.27■□□□□ 0.67
COL11A2-202ENST00000361917 PLCB2Q00722 1185 aa19.26■□□□□ 0.67
COL11A2-202ENST00000361917 NPHP1O15259 732 aa19.26■□□□□ 0.67
COL11A2-202ENST00000361917 OS9Q13438 667 aaPredicted RBP19.25■□□□□ 0.67
COL11A2-202ENST00000361917 U2SURPO15042 1029 aaKnown RBP19.24■□□□□ 0.67
COL11A2-202ENST00000361917 HSP90AB1P08238 724 aaKnown RBP19.22■□□□□ 0.67
COL11A2-202ENST00000361917 NAP1L2Q9ULW6 460 aaPredicted RBP19.21■□□□□ 0.67
COL11A2-202ENST00000361917 PPP4R2Q9NY27 417 aa19.2■□□□□ 0.66
COL11A2-202ENST00000361917 NAP1L5Q96NT1 182 aaPredicted RBP19.19■□□□□ 0.66
COL11A2-202ENST00000361917 FGD1P98174 961 aa19.19■□□□□ 0.66
COL11A2-202ENST00000361917 EEA1Q15075 1411 aa19.17■□□□□ 0.66
COL11A2-202ENST00000361917 KCNJ4P48050 445 aa19.17■□□□□ 0.66
COL11A2-202ENST00000361917 WRNQ14191 1432 aaPredicted RBP eCLIP19.16■□□□□ 0.66
COL11A2-202ENST00000361917 SOX12O15370 315 aa19.15■□□□□ 0.66
COL11A2-202ENST00000361917 B4GALNT3Q6L9W6 998 aa19.14■□□□□ 0.66
COL11A2-202ENST00000361917 NOP58Q9Y2X3 529 aaKnown RBP19.14■□□□□ 0.66
COL11A2-202ENST00000361917 KIF27Q86VH2 1401 aa19.13■□□□□ 0.65
COL11A2-202ENST00000361917 GOLGA2Q08379 1002 aa19.11■□□□□ 0.65
COL11A2-202ENST00000361917 ERICH6BQ5W0A0 696 aa19.11■□□□□ 0.65
COL11A2-202ENST00000361917 DCAF11Q8TEB1 546 aa19.11■□□□□ 0.65
COL11A2-202ENST00000361917 CHMP4BQ9H444 224 aaKnown RBP19.11■□□□□ 0.65
COL11A2-202ENST00000361917 GOLGA6L6A8MZA4 724 aa19.1■□□□□ 0.65
COL11A2-202ENST00000361917 SPRYD3Q8NCJ5 442 aa19.09■□□□□ 0.65
COL11A2-202ENST00000361917 BAZ1BQ9UIG0 1483 aaKnown RBP19.09■□□□□ 0.65
COL11A2-202ENST00000361917 TMF1P82094 1093 aa19.09■□□□□ 0.65
COL11A2-202ENST00000361917 MS4A1P11836 297 aa19.09■□□□□ 0.65
COL11A2-202ENST00000361917 CEP164Q9UPV0 1460 aa19.08■□□□□ 0.65
COL11A2-202ENST00000361917 PNNQ9H307 717 aaKnown RBP19.08■□□□□ 0.65
COL11A2-202ENST00000361917 ERCC6Q03468 1493 aa19.08■□□□□ 0.65
COL11A2-202ENST00000361917 SAFB2Q14151 953 aaKnown RBP eCLIP19.07■□□□□ 0.64
COL11A2-202ENST00000361917 CCNB3Q8WWL7 1395 aa19.07■□□□□ 0.64
COL11A2-202ENST00000361917 MLECQ14165 292 aa19.06■□□□□ 0.64
COL11A2-202ENST00000361917 TNIKQ9UKE5 1360 aa19.06■□□□□ 0.64
COL11A2-202ENST00000361917 SRPK2P78362 688 aaKnown RBP19.06■□□□□ 0.64
COL11A2-202ENST00000361917 HSCBQ8IWL3 235 aa19.06■□□□□ 0.64
COL11A2-202ENST00000361917 EIF4G1Q04637 1599 aaKnown RBP19.04■□□□□ 0.64
COL11A2-202ENST00000361917 AMER1Q5JTC6 1135 aaPredicted RBP19.03■□□□□ 0.64
COL11A2-202ENST00000361917 GOLGA6L4A6NEF3 574 aa19.03■□□□□ 0.64
COL11A2-202ENST00000361917 MORC1Q86VD1 984 aa19.02■□□□□ 0.64
COL11A2-202ENST00000361917 NACADO15069 1562 aa19.02■□□□□ 0.64
COL11A2-202ENST00000361917 KANK1Q14678 1352 aa19.01■□□□□ 0.63
COL11A2-202ENST00000361917 CLSTN1O94985 981 aa18.99■□□□□ 0.63
COL11A2-202ENST00000361917 APBB1O00213 710 aa18.98■□□□□ 0.63
COL11A2-202ENST00000361917 MCCP23508 829 aa18.97■□□□□ 0.63
COL11A2-202ENST00000361917 NRDCO43847 1150 aa18.96■□□□□ 0.63
COL11A2-202ENST00000361917 STK26Q9P289 416 aa18.96■□□□□ 0.63
COL11A2-202ENST00000361917 ISY1Q9ULR0 285 aaKnown RBP18.96■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms