RNA–Protein interactions for RNA: ENST00000360835.8

SCUBE1-202, Transcript of signal peptide, CUB domain and EGF like domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCUBE1, Length 9,808 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCUBE1-202ENST00000360835 TNIKQ9UKE5 1360 aa19.46■□□□□ 0.71
SCUBE1-202ENST00000360835 TSPY4P0CV99 314 aa19.46■□□□□ 0.71
SCUBE1-202ENST00000360835 TSPY10P0CW01 314 aa19.46■□□□□ 0.71
SCUBE1-202ENST00000360835 DDRGK1Q96HY6 314 aa19.46■□□□□ 0.71
SCUBE1-202ENST00000360835 WRNQ14191 1432 aaPredicted RBP eCLIP19.45■□□□□ 0.7
SCUBE1-202ENST00000360835 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.44■□□□□ 0.7
SCUBE1-202ENST00000360835 KDM2AQ9Y2K7 1162 aa19.42■□□□□ 0.7
SCUBE1-202ENST00000360835 HIRIP3Q9BW71 556 aaPredicted RBP19.42■□□□□ 0.7
SCUBE1-202ENST00000360835 BECN1Q14457 450 aa19.4■□□□□ 0.7
SCUBE1-202ENST00000360835 MYH16Q9H6N6 1097 aa19.39■□□□□ 0.69
SCUBE1-202ENST00000360835 RRP7BPQ9NSQ0 103 aa19.36■□□□□ 0.69
SCUBE1-202ENST00000360835 BAZ1BQ9UIG0 1483 aaKnown RBP19.36■□□□□ 0.69
SCUBE1-202ENST00000360835 KIF27Q86VH2 1401 aa19.36■□□□□ 0.69
SCUBE1-202ENST00000360835 ANP32EQ9BTT0 268 aa19.35■□□□□ 0.69
SCUBE1-202ENST00000360835 ARXQ96QS3 562 aa19.34■□□□□ 0.69
SCUBE1-202ENST00000360835 BAZ1AQ9NRL2 1556 aaPredicted RBP19.32■□□□□ 0.68
SCUBE1-202ENST00000360835 NPM1P06748 294 aaKnown RBP eCLIP19.31■□□□□ 0.68
SCUBE1-202ENST00000360835 CHMP7Q8WUX9 453 aaPredicted RBP19.25■□□□□ 0.67
SCUBE1-202ENST00000360835 SUPT16HQ9Y5B9 1047 aaKnown RBP19.25■□□□□ 0.67
SCUBE1-202ENST00000360835 CDCA8Q53HL2 280 aa19.22■□□□□ 0.67
SCUBE1-202ENST00000360835 GOLGA6L22H0YM25 854 aa19.22■□□□□ 0.67
SCUBE1-202ENST00000360835 PPP4R2Q9NY27 417 aa19.21■□□□□ 0.67
SCUBE1-202ENST00000360835 TRIM44Q96DX7 344 aaPredicted RBP19.2■□□□□ 0.66
SCUBE1-202ENST00000360835 FHAD1B1AJZ9 1412 aa19.19■□□□□ 0.66
SCUBE1-202ENST00000360835 PPM1GO15355 546 aaPredicted RBP19.19■□□□□ 0.66
SCUBE1-202ENST00000360835 KNSTRNQ9Y448 316 aa19.19■□□□□ 0.66
SCUBE1-202ENST00000360835 CCNB3Q8WWL7 1395 aa19.18■□□□□ 0.66
SCUBE1-202ENST00000360835 CFAP53Q96M91 514 aa19.16■□□□□ 0.66
SCUBE1-202ENST00000360835 NCLP19338 710 aaKnown RBP19.15■□□□□ 0.66
SCUBE1-202ENST00000360835 PLEKHD1A6NEE1 506 aa19.15■□□□□ 0.66
SCUBE1-202ENST00000360835 CARD11Q9BXL7 1154 aa19.14■□□□□ 0.65
SCUBE1-202ENST00000360835 NOP58Q9Y2X3 529 aaKnown RBP19.13■□□□□ 0.65
SCUBE1-202ENST00000360835 CFDP1Q9UEE9 299 aaPredicted RBP19.12■□□□□ 0.65
SCUBE1-202ENST00000360835 FTSJ3Q8IY81 847 aaKnown RBP19.11■□□□□ 0.65
SCUBE1-202ENST00000360835 CASC1Q6TDU7 716 aa19.1■□□□□ 0.65
SCUBE1-202ENST00000360835 TIMELESSQ9UNS1 1208 aa19.08■□□□□ 0.64
SCUBE1-202ENST00000360835 RGL3Q3MIN7 710 aa19.07■□□□□ 0.64
SCUBE1-202ENST00000360835 VPS8Q8N3P4 1428 aa19.07■□□□□ 0.64
SCUBE1-202ENST00000360835 ERICH6BQ5W0A0 696 aa19.07■□□□□ 0.64
SCUBE1-202ENST00000360835 SIN3AQ96ST3 1273 aa19.06■□□□□ 0.64
SCUBE1-202ENST00000360835 CCER2I3L3R5 266 aa19.05■□□□□ 0.64
SCUBE1-202ENST00000360835 ARHGAP35Q9NRY4 1499 aa19.03■□□□□ 0.64
SCUBE1-202ENST00000360835 PLPPR3Q6T4P5 718 aa19.03■□□□□ 0.64
SCUBE1-202ENST00000360835 SETD5Q9C0A6 1442 aa19.03■□□□□ 0.64
SCUBE1-202ENST00000360835 PPP1R15AO75807 674 aaPredicted RBP19.02■□□□□ 0.63
SCUBE1-202ENST00000360835 LAS1LQ9Y4W2 734 aaKnown RBP19.01■□□□□ 0.63
SCUBE1-202ENST00000360835 SOGA1O94964 1423 aa19.01■□□□□ 0.63
SCUBE1-202ENST00000360835 ABCC8Q09428 1581 aa18.99■□□□□ 0.63
SCUBE1-202ENST00000360835 KCNH8Q96L42 1107 aa18.98■□□□□ 0.63
SCUBE1-202ENST00000360835 PTMAP06454 111 aaKnown RBP18.98■□□□□ 0.63
SCUBE1-202ENST00000360835 CHMP4BQ9H444 224 aaKnown RBP18.98■□□□□ 0.63
SCUBE1-202ENST00000360835 MAPK8IP3Q9UPT6 1336 aa18.97■□□□□ 0.63
SCUBE1-202ENST00000360835 SENP3-EIF4A1A0A087X0R7 540 aa18.97■□□□□ 0.63
SCUBE1-202ENST00000360835 CECR2Q9BXF3 1484 aa18.97■□□□□ 0.63
SCUBE1-202ENST00000360835 RGS3P49796 1198 aa18.96■□□□□ 0.63
SCUBE1-202ENST00000360835 MS4A1P11836 297 aa18.96■□□□□ 0.63
SCUBE1-202ENST00000360835 EIF4G1Q04637 1599 aaKnown RBP18.96■□□□□ 0.63
SCUBE1-202ENST00000360835 B4GALNT3Q6L9W6 998 aa18.95■□□□□ 0.62
SCUBE1-202ENST00000360835 TNNT2P45379 298 aaPredicted RBP18.94■□□□□ 0.62
SCUBE1-202ENST00000360835 NUDCQ9Y266 331 aa18.94■□□□□ 0.62
SCUBE1-202ENST00000360835 CUX2O14529 1486 aa18.93■□□□□ 0.62
SCUBE1-202ENST00000360835 ZRSR1Q15695 479 aaKnown RBP18.92■□□□□ 0.62
SCUBE1-202ENST00000360835 CARMIL1Q5VZK9 1371 aa18.92■□□□□ 0.62
SCUBE1-202ENST00000360835 CDK11BP21127 795 aaKnown RBP18.91■□□□□ 0.62
SCUBE1-202ENST00000360835 CC2D1BQ5T0F9 858 aaKnown RBP18.9■□□□□ 0.62
SCUBE1-202ENST00000360835 NEUROD2Q15784 382 aa18.89■□□□□ 0.61
SCUBE1-202ENST00000360835 FRAT1Q92837 279 aaPredicted RBP18.89■□□□□ 0.61
SCUBE1-202ENST00000360835 TMF1P82094 1093 aa18.88■□□□□ 0.61
SCUBE1-202ENST00000360835 NAP1L5Q96NT1 182 aaPredicted RBP18.88■□□□□ 0.61
SCUBE1-202ENST00000360835 C14orf37Q86TY3 774 aa18.88■□□□□ 0.61
SCUBE1-202ENST00000360835 CCDC88BA6NC98 1476 aa18.88■□□□□ 0.61
SCUBE1-202ENST00000360835 DNTTIP2Q5QJE6 756 aaKnown RBP18.88■□□□□ 0.61
SCUBE1-202ENST00000360835 RBM19Q9Y4C8 960 aaKnown RBP18.87■□□□□ 0.61
SCUBE1-202ENST00000360835 HSP90AB1P08238 724 aaKnown RBP18.86■□□□□ 0.61
SCUBE1-202ENST00000360835 SMARCA2P51531 1590 aa18.86■□□□□ 0.61
SCUBE1-202ENST00000360835 MROH2BQ7Z745 1585 aa18.86■□□□□ 0.61
SCUBE1-202ENST00000360835 PNNQ9H307 717 aaKnown RBP18.86■□□□□ 0.61
SCUBE1-202ENST00000360835 SENP3Q9H4L4 574 aaPredicted RBP18.84■□□□□ 0.61
SCUBE1-202ENST00000360835 KTN1Q86UP2 1357 aaKnown RBP18.84■□□□□ 0.61
SCUBE1-202ENST00000360835 ZBTB7CA1YPR0 619 aa18.83■□□□□ 0.61
SCUBE1-202ENST00000360835 KANK1Q14678 1352 aa18.83■□□□□ 0.6
SCUBE1-202ENST00000360835 WIZO95785 1651 aa18.83■□□□□ 0.6
SCUBE1-202ENST00000360835 HSCBQ8IWL3 235 aa18.83■□□□□ 0.6
SCUBE1-202ENST00000360835 TOP2AP11388 1531 aaKnown RBP18.83■□□□□ 0.6
SCUBE1-202ENST00000360835 DCAF11Q8TEB1 546 aa18.82■□□□□ 0.6
SCUBE1-202ENST00000360835 RTN4Q9NQC3 1192 aaKnown RBP18.82■□□□□ 0.6
SCUBE1-202ENST00000360835 RAB3GAP2Q9H2M9 1393 aa18.82■□□□□ 0.6
SCUBE1-202ENST00000360835 HSPA5P11021 654 aaKnown RBP18.81■□□□□ 0.6
SCUBE1-202ENST00000360835 L1TD1Q5T7N2 865 aaKnown RBP18.81■□□□□ 0.6
SCUBE1-202ENST00000360835 DEKP35659 375 aaKnown RBP18.81■□□□□ 0.6
SCUBE1-202ENST00000360835 POGKQ9P215 609 aa18.79■□□□□ 0.6
SCUBE1-202ENST00000360835 ERCC6Q03468 1493 aa18.79■□□□□ 0.6
SCUBE1-202ENST00000360835 FMN1Q68DA7 1419 aa18.79■□□□□ 0.6
SCUBE1-202ENST00000360835 GOLGA6L6A8MZA4 724 aa18.76■□□□□ 0.59
SCUBE1-202ENST00000360835 U2SURPO15042 1029 aaKnown RBP18.74■□□□□ 0.59
SCUBE1-202ENST00000360835 CFAP44Q96MT7 982 aa18.74■□□□□ 0.59
SCUBE1-202ENST00000360835 RALBP1Q15311 655 aa18.73■□□□□ 0.59
SCUBE1-202ENST00000360835 KANK4Q5T7N3 995 aaPredicted RBP18.72■□□□□ 0.59
SCUBE1-202ENST00000360835 TPRNQ4KMQ1 711 aa18.72■□□□□ 0.59
SCUBE1-202ENST00000360835 A0A0G2JS52 829 aa18.71■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms