RNA–Protein interactions for RNA: ENST00000359428.9

NUP214-201, Transcript of nucleoporin 214, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NUP214, Length 7,600 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP214-201ENST00000359428 SUPT16HQ9Y5B9 1047 aaKnown RBP11.33□□□□□ -0.6
NUP214-201ENST00000359428 FBXO3Q9UK99 471 aa11.33□□□□□ -0.6
NUP214-201ENST00000359428 TNNT2P45379 298 aaPredicted RBP11.33□□□□□ -0.6
NUP214-201ENST00000359428 TONSLQ96HA7 1378 aa11.31□□□□□ -0.6
NUP214-201ENST00000359428 ZRSR1Q15695 479 aaKnown RBP11.29□□□□□ -0.6
NUP214-201ENST00000359428 MRS2Q9HD23 443 aa11.29□□□□□ -0.6
NUP214-201ENST00000359428 CSRNP3Q8WYN3 585 aa11.28□□□□□ -0.6
NUP214-201ENST00000359428 DEKP35659 375 aaKnown RBP11.28□□□□□ -0.6
NUP214-201ENST00000359428 LAS1LQ9Y4W2 734 aaKnown RBP11.28□□□□□ -0.6
NUP214-201ENST00000359428 TMC1Q8TDI8 760 aa11.27□□□□□ -0.61
NUP214-201ENST00000359428 SENP3-EIF4A1A0A087X0R7 540 aa11.27□□□□□ -0.61
NUP214-201ENST00000359428 DNTTIP2Q5QJE6 756 aaKnown RBP11.27□□□□□ -0.61
NUP214-201ENST00000359428 C14orf37Q86TY3 774 aa11.26□□□□□ -0.61
NUP214-201ENST00000359428 SENP3Q9H4L4 574 aaPredicted RBP11.25□□□□□ -0.61
NUP214-201ENST00000359428 NAP1L5Q96NT1 182 aaPredicted RBP11.24□□□□□ -0.61
NUP214-201ENST00000359428 ANO8Q9HCE9 1232 aaPredicted RBP11.24□□□□□ -0.61
NUP214-201ENST00000359428 CCDC180Q9P1Z9 1646 aa11.24□□□□□ -0.61
NUP214-201ENST00000359428 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.24□□□□□ -0.61
NUP214-201ENST00000359428 NOP58Q9Y2X3 529 aaKnown RBP11.24□□□□□ -0.61
NUP214-201ENST00000359428 HAP1P54257 671 aaPredicted RBP11.23□□□□□ -0.61
NUP214-201ENST00000359428 PDE4CQ08493 712 aa11.23□□□□□ -0.61
NUP214-201ENST00000359428 NCLP19338 710 aaKnown RBP11.22□□□□□ -0.61
NUP214-201ENST00000359428 ERICH6BQ5W0A0 696 aa11.22□□□□□ -0.61
NUP214-201ENST00000359428 RBM19Q9Y4C8 960 aaKnown RBP11.22□□□□□ -0.61
NUP214-201ENST00000359428 PTMAP06454 111 aaKnown RBP11.2□□□□□ -0.62
NUP214-201ENST00000359428 DDRGK1Q96HY6 314 aa11.2□□□□□ -0.62
NUP214-201ENST00000359428 GOLGA6L2Q8N9W4 650 aaPredicted RBP11.19□□□□□ -0.62
NUP214-201ENST00000359428 ISY1Q9ULR0 285 aaKnown RBP11.19□□□□□ -0.62
NUP214-201ENST00000359428 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.18□□□□□ -0.621e-6■□□□□ 10.9
NUP214-201ENST00000359428 B4GALNT3Q6L9W6 998 aa11.17□□□□□ -0.62
NUP214-201ENST00000359428 PPM1GO15355 546 aaPredicted RBP11.15□□□□□ -0.62
NUP214-201ENST00000359428 PLCB2Q00722 1185 aa11.15□□□□□ -0.62
NUP214-201ENST00000359428 MYH16Q9H6N6 1097 aa11.14□□□□□ -0.63
NUP214-201ENST00000359428 BECN1Q14457 450 aa11.14□□□□□ -0.63
NUP214-201ENST00000359428 NOC3LQ8WTT2 800 aaKnown RBP11.13□□□□□ -0.63
NUP214-201ENST00000359428 ARID4BQ4LE39 1312 aaPredicted RBP11.13□□□□□ -0.63
NUP214-201ENST00000359428 NAP1L2Q9ULW6 460 aaPredicted RBP11.13□□□□□ -0.63
NUP214-201ENST00000359428 TSHZ2Q9NRE2 1034 aa11.12□□□□□ -0.63
NUP214-201ENST00000359428 PPP4R2Q9NY27 417 aa11.12□□□□□ -0.63
NUP214-201ENST00000359428 PPP1R15AO75807 674 aaPredicted RBP11.09□□□□□ -0.63
NUP214-201ENST00000359428 CHIC2Q9UKJ5 165 aa11.09□□□□□ -0.63
NUP214-201ENST00000359428 GOLGA2Q08379 1002 aa11.08□□□□□ -0.63
NUP214-201ENST00000359428 WDR43Q15061 677 aaKnown RBP eCLIP11.08□□□□□ -0.632e-8■□□□□ 10.2
NUP214-201ENST00000359428 EIF4G2P78344 907 aaKnown RBP eCLIP11.06□□□□□ -0.64
NUP214-201ENST00000359428 KDM2AQ9Y2K7 1162 aa11.05□□□□□ -0.64
NUP214-201ENST00000359428 RGS3P49796 1198 aa11.04□□□□□ -0.64
NUP214-201ENST00000359428 GOLGA6L22H0YM25 854 aa11.04□□□□□ -0.64
NUP214-201ENST00000359428 A0A0U1RQG5 324 aaPredicted RBP11.03□□□□□ -0.64
NUP214-201ENST00000359428 GOLGA6L6A8MZA4 724 aa11.02□□□□□ -0.64
NUP214-201ENST00000359428 KIAA2012Q0VF49 1180 aa11.02□□□□□ -0.65
NUP214-201ENST00000359428 PNNQ9H307 717 aaKnown RBP11.01□□□□□ -0.65
NUP214-201ENST00000359428 WWC1Q8IX03 1113 aa11□□□□□ -0.65
NUP214-201ENST00000359428 ARID3AQ99856 593 aa11□□□□□ -0.65
NUP214-201ENST00000359428 FGD1P98174 961 aa11□□□□□ -0.65
NUP214-201ENST00000359428 TSPY4P0CV99 314 aa11□□□□□ -0.65
NUP214-201ENST00000359428 TSPY10P0CW01 314 aa11□□□□□ -0.65
NUP214-201ENST00000359428 CHMP7Q8WUX9 453 aaPredicted RBP10.98□□□□□ -0.65
NUP214-201ENST00000359428 CNKSR2Q8WXI2 1034 aa10.98□□□□□ -0.65
NUP214-201ENST00000359428 LMOD2Q6P5Q4 547 aa10.97□□□□□ -0.65
NUP214-201ENST00000359428 KCNH8Q96L42 1107 aa10.96□□□□□ -0.65
NUP214-201ENST00000359428 SIN3AQ96ST3 1273 aa10.96□□□□□ -0.66
NUP214-201ENST00000359428 SPRYD3Q8NCJ5 442 aa10.95□□□□□ -0.66
NUP214-201ENST00000359428 CASC1Q6TDU7 716 aa10.95□□□□□ -0.66
NUP214-201ENST00000359428 DRC7Q8IY82 874 aa10.95□□□□□ -0.66
NUP214-201ENST00000359428 CALRP27797 417 aaKnown RBP10.95□□□□□ -0.66
NUP214-201ENST00000359428 CLIP1P30622 1438 aa10.95□□□□□ -0.66
NUP214-201ENST00000359428 CEP162Q5TB80 1403 aa10.94□□□□□ -0.66
NUP214-201ENST00000359428 PATL2C9JE40 543 aaKnown RBP10.94□□□□□ -0.66
NUP214-201ENST00000359428 RRP7BPQ9NSQ0 103 aa10.93□□□□□ -0.66
NUP214-201ENST00000359428 GZF1Q9H116 711 aaPredicted RBP10.92□□□□□ -0.66
NUP214-201ENST00000359428 L1TD1Q5T7N2 865 aaKnown RBP10.92□□□□□ -0.66
NUP214-201ENST00000359428 MSNP26038 577 aaKnown RBP10.92□□□□□ -0.66
NUP214-201ENST00000359428 KCNJ4P48050 445 aa10.91□□□□□ -0.66
NUP214-201ENST00000359428 OS9Q13438 667 aaPredicted RBP10.9□□□□□ -0.66
NUP214-201ENST00000359428 NRDCO43847 1150 aa10.9□□□□□ -0.67
NUP214-201ENST00000359428 TRHP20396 242 aaPredicted RBP10.9□□□□□ -0.67
NUP214-201ENST00000359428 HSP90AB1P08238 724 aaKnown RBP10.89□□□□□ -0.67
NUP214-201ENST00000359428 TNNT3P45378 269 aaPredicted RBP10.89□□□□□ -0.67
NUP214-201ENST00000359428 CHAF1AQ13111 956 aaPredicted RBP10.89□□□□□ -0.67
NUP214-201ENST00000359428 GNL2Q13823 731 aaKnown RBP10.89□□□□□ -0.67
NUP214-201ENST00000359428 FRAT1Q92837 279 aaPredicted RBP10.87□□□□□ -0.67
NUP214-201ENST00000359428 NEUROD2Q15784 382 aa10.87□□□□□ -0.67
NUP214-201ENST00000359428 VSIG10Q8N0Z9 540 aa10.87□□□□□ -0.67
NUP214-201ENST00000359428 IPO9Q96P70 1041 aaKnown RBP10.87□□□□□ -0.67
NUP214-201ENST00000359428 SLKQ9H2G2 1235 aaPredicted RBP10.87□□□□□ -0.67
NUP214-201ENST00000359428 FTSJ3Q8IY81 847 aaKnown RBP10.87□□□□□ -0.67
NUP214-201ENST00000359428 MTUS2Q5JR59 1369 aa10.86□□□□□ -0.67
NUP214-201ENST00000359428 TIMELESSQ9UNS1 1208 aa10.85□□□□□ -0.67
NUP214-201ENST00000359428 CREBRFQ8IUR6 639 aa10.85□□□□□ -0.67
NUP214-201ENST00000359428 SCRIBQ14160 1630 aa10.85□□□□□ -0.67
NUP214-201ENST00000359428 HSP90AA2PQ14568 343 aaPredicted RBP10.84□□□□□ -0.67
NUP214-201ENST00000359428 GOLGA6L4A6NEF3 574 aa10.84□□□□□ -0.67
NUP214-201ENST00000359428 CCER2I3L3R5 266 aa10.83□□□□□ -0.68
NUP214-201ENST00000359428 CFAP53Q96M91 514 aa10.83□□□□□ -0.68
NUP214-201ENST00000359428 VPS53Q5VIR6 699 aa10.83□□□□□ -0.68
NUP214-201ENST00000359428 TMX4Q9H1E5 349 aaPredicted RBP10.83□□□□□ -0.68
NUP214-201ENST00000359428 RGL3Q3MIN7 710 aa10.82□□□□□ -0.68
NUP214-201ENST00000359428 HSCBQ8IWL3 235 aa10.82□□□□□ -0.68
NUP214-201ENST00000359428 CEP89Q96ST8 783 aa10.82□□□□□ -0.68
NUP214-201ENST00000359428 G3V3G9 751 aa10.81□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms