RNA–Protein interactions for RNA: ENST00000357977.5

NFIA-201, Transcript of nuclear factor I A, humanhuman

TSL 2 BASIC

Gene NFIA, Length 3,200 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFIA-201ENST00000357977 KCNA4P22459 653 aa9.6□□□□□ -0.87
NFIA-201ENST00000357977 ERICH6Q7L0X2 663 aa9.58□□□□□ -0.88
NFIA-201ENST00000357977 SAMD1Q6SPF0 538 aaPredicted RBP9.57□□□□□ -0.88
NFIA-201ENST00000357977 ZNF219Q9P2Y4 722 aaPredicted RBP9.57□□□□□ -0.88
NFIA-201ENST00000357977 RANGAP1P46060 587 aaPredicted RBP9.56□□□□□ -0.88
NFIA-201ENST00000357977 SMARCA4P51532 1647 aa9.56□□□□□ -0.88
NFIA-201ENST00000357977 ITGAEP38570 1179 aa9.56□□□□□ -0.88
NFIA-201ENST00000357977 BAZ1BQ9UIG0 1483 aaKnown RBP9.56□□□□□ -0.88
NFIA-201ENST00000357977 RAPGEF2Q9Y4G8 1499 aa9.53□□□□□ -0.88
NFIA-201ENST00000357977 MYT1LQ9UL68 1186 aa9.52□□□□□ -0.89
NFIA-201ENST00000357977 SYNJ1O43426 1573 aa9.51□□□□□ -0.89
NFIA-201ENST00000357977 DDX10Q13206 875 aaKnown RBP9.51□□□□□ -0.89
NFIA-201ENST00000357977 FANCIQ9NVI1 1328 aa9.5□□□□□ -0.89
NFIA-201ENST00000357977 TRIM52Q96A61 297 aa9.5□□□□□ -0.89
NFIA-201ENST00000357977 CUX2O14529 1486 aa9.49□□□□□ -0.89
NFIA-201ENST00000357977 KANK4Q5T7N3 995 aaPredicted RBP9.49□□□□□ -0.89
NFIA-201ENST00000357977 RRBP1Q9P2E9 1410 aaKnown RBP9.49□□□□□ -0.89
NFIA-201ENST00000357977 SPINK5Q9NQ38 1064 aaPredicted RBP9.48□□□□□ -0.89
NFIA-201ENST00000357977 CDK11AQ9UQ88 783 aaPredicted RBP9.47□□□□□ -0.89
NFIA-201ENST00000357977 MAPKBP1O60336 1514 aa9.45□□□□□ -0.9
NFIA-201ENST00000357977 ARAP1Q96P48 1450 aa9.45□□□□□ -0.9
NFIA-201ENST00000357977 DEKP35659 375 aaKnown RBP9.45□□□□□ -0.9
NFIA-201ENST00000357977 CCNB3Q8WWL7 1395 aa9.45□□□□□ -0.9
NFIA-201ENST00000357977 MYCNP04198 464 aaPredicted RBP9.44□□□□□ -0.9
NFIA-201ENST00000357977 CCER2I3L3R5 266 aa9.44□□□□□ -0.9
NFIA-201ENST00000357977 PPP1R15AO75807 674 aaPredicted RBP9.44□□□□□ -0.9
NFIA-201ENST00000357977 WDR97A6NE52 1622 aa9.43□□□□□ -0.9
NFIA-201ENST00000357977 RAB3GAP2Q9H2M9 1393 aa9.43□□□□□ -0.9
NFIA-201ENST00000357977 ANP32CO43423 234 aa9.43□□□□□ -0.9
NFIA-201ENST00000357977 CAPN15O75808 1086 aa9.41□□□□□ -0.9
NFIA-201ENST00000357977 HIRIP3Q9BW71 556 aaPredicted RBP9.39□□□□□ -0.91
NFIA-201ENST00000357977 IRX6P78412 446 aaPredicted RBP9.39□□□□□ -0.91
NFIA-201ENST00000357977 SIN3AQ96ST3 1273 aa9.39□□□□□ -0.91
NFIA-201ENST00000357977 ERICH3Q5RHP9 1530 aa9.38□□□□□ -0.91
NFIA-201ENST00000357977 ANO8Q9HCE9 1232 aaPredicted RBP9.37□□□□□ -0.91
NFIA-201ENST00000357977 PRXQ9BXM0 1461 aa9.36□□□□□ -0.91
NFIA-201ENST00000357977 SETD5Q9C0A6 1442 aa9.36□□□□□ -0.91
NFIA-201ENST00000357977 POTEHQ6S545 545 aa9.35□□□□□ -0.91
NFIA-201ENST00000357977 HNRNPUQ00839 825 aaKnown RBP eCLIP9.35□□□□□ -0.91
NFIA-201ENST00000357977 RBM42Q9BTD8 480 aaKnown RBP9.33□□□□□ -0.92
NFIA-201ENST00000357977 NBR1Q14596 966 aa9.33□□□□□ -0.92
NFIA-201ENST00000357977 ERICH6BQ5W0A0 696 aa9.33□□□□□ -0.92
NFIA-201ENST00000357977 TOP2BQ02880 1626 aa9.33□□□□□ -0.92
NFIA-201ENST00000357977 TIMELESSQ9UNS1 1208 aa9.33□□□□□ -0.92
NFIA-201ENST00000357977 NOP58Q9Y2X3 529 aaKnown RBP9.31□□□□□ -0.92
NFIA-201ENST00000357977 UNC13AQ9UPW8 1703 aa9.31□□□□□ -0.92
NFIA-201ENST00000357977 PEG3Q9GZU2 1588 aa9.31□□□□□ -0.92
NFIA-201ENST00000357977 ATXN8OSP0DMR3 200 aa9.31□□□□□ -0.92
NFIA-201ENST00000357977 PPP4R2Q9NY27 417 aa9.31□□□□□ -0.92
NFIA-201ENST00000357977 ARHGAP35Q9NRY4 1499 aa9.3□□□□□ -0.92
NFIA-201ENST00000357977 RTL5Q5HYW3 569 aaPredicted RBP9.28□□□□□ -0.92
NFIA-201ENST00000357977 SALL2Q9Y467 1007 aaPredicted RBP9.28□□□□□ -0.92
NFIA-201ENST00000357977 ZBTB12Q9Y330 459 aaPredicted RBP9.27□□□□□ -0.92
NFIA-201ENST00000357977 BIVM-ERCC5R4GMW8 1640 aa9.27□□□□□ -0.92
NFIA-201ENST00000357977 FAM50AQ14320 339 aaKnown RBP9.27□□□□□ -0.93
NFIA-201ENST00000357977 TIAM1Q13009 1591 aa9.27□□□□□ -0.93
NFIA-201ENST00000357977 B4GALNT3Q6L9W6 998 aa9.26□□□□□ -0.93
NFIA-201ENST00000357977 PAK3O75914 559 aaPredicted RBP9.26□□□□□ -0.93
NFIA-201ENST00000357977 PHLDB1Q86UU1 1377 aa9.26□□□□□ -0.93
NFIA-201ENST00000357977 TONSLQ96HA7 1378 aa9.25□□□□□ -0.93
NFIA-201ENST00000357977 MAP3K1Q13233 1512 aa9.24□□□□□ -0.93
NFIA-201ENST00000357977 LRRC9Q6ZRR7 1453 aa9.23□□□□□ -0.93
NFIA-201ENST00000357977 KIF27Q86VH2 1401 aa9.23□□□□□ -0.93
NFIA-201ENST00000357977 ANP32AP39687 249 aaKnown RBP9.22□□□□□ -0.93
NFIA-201ENST00000357977 CCDC136Q96JN2 1154 aa9.22□□□□□ -0.93
NFIA-201ENST00000357977 FOXD4L1Q9NU39 408 aa9.22□□□□□ -0.93
NFIA-201ENST00000357977 ATAD2BQ9ULI0 1458 aa9.21□□□□□ -0.93
NFIA-201ENST00000357977 PABPN1Q86U42 306 aaKnown RBP eCLIP9.21□□□□□ -0.94
NFIA-201ENST00000357977 ZBTB47Q9UFB7 747 aaPredicted RBP9.2□□□□□ -0.94
NFIA-201ENST00000357977 IL27Q8NEV9 243 aa9.2□□□□□ -0.94
NFIA-201ENST00000357977 IPO9Q96P70 1041 aaKnown RBP9.2□□□□□ -0.94
NFIA-201ENST00000357977 RTN4Q9NQC3 1192 aaKnown RBP9.2□□□□□ -0.94
NFIA-201ENST00000357977 FHAD1B1AJZ9 1412 aa9.19□□□□□ -0.94
NFIA-201ENST00000357977 CCDC184Q52MB2 194 aa9.18□□□□□ -0.94
NFIA-201ENST00000357977 WASHC2AQ641Q2 1341 aa9.18□□□□□ -0.94
NFIA-201ENST00000357977 CUX1P39880 1505 aa9.17□□□□□ -0.94
NFIA-201ENST00000357977 ZBED9Q6R2W3 1325 aa9.17□□□□□ -0.94
NFIA-201ENST00000357977 FAM9BQ8IZU0 186 aa9.17□□□□□ -0.94
NFIA-201ENST00000357977 AKT1S1Q96B36 256 aa9.17□□□□□ -0.94
NFIA-201ENST00000357977 BICRAQ9NZM4 1560 aa9.17□□□□□ -0.94
NFIA-201ENST00000357977 ZBTB4Q9P1Z0 1013 aaPredicted RBP9.16□□□□□ -0.94
NFIA-201ENST00000357977 CFAP43Q8NDM7 1665 aa9.16□□□□□ -0.94
NFIA-201ENST00000357977 UBE2Q2Q8WVN8 375 aa9.16□□□□□ -0.94
NFIA-201ENST00000357977 CCDC18Q5T9S5 1454 aa9.15□□□□□ -0.94
NFIA-201ENST00000357977 HSPA5P11021 654 aaKnown RBP9.14□□□□□ -0.95
NFIA-201ENST00000357977 MRS2Q9HD23 443 aa9.14□□□□□ -0.95
NFIA-201ENST00000357977 CNTLNQ9NXG0 1405 aa9.14□□□□□ -0.95
NFIA-201ENST00000357977 UACAQ9BZF9 1416 aa9.14□□□□□ -0.95
NFIA-201ENST00000357977 TRHP20396 242 aaPredicted RBP9.14□□□□□ -0.95
NFIA-201ENST00000357977 KDM5BQ9UGL1 1544 aa9.13□□□□□ -0.95
NFIA-201ENST00000357977 ATP1B4Q9UN42 357 aaPredicted RBP9.13□□□□□ -0.95
NFIA-201ENST00000357977 NCOA2Q15596 1464 aa9.13□□□□□ -0.95
NFIA-201ENST00000357977 PCF11O94913 1555 aaKnown RBP9.13□□□□□ -0.95
NFIA-201ENST00000357977 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP9.13□□□□□ -0.95
NFIA-201ENST00000357977 PRKRIP1Q9H875 184 aaPredicted RBP9.12□□□□□ -0.95
NFIA-201ENST00000357977 AKNAQ7Z591 1439 aa9.11□□□□□ -0.95
NFIA-201ENST00000357977 EIF4G2P78344 907 aaKnown RBP eCLIP9.1□□□□□ -0.95
NFIA-201ENST00000357977 SLC4A1APQ9BWU0 796 aaKnown RBP9.1□□□□□ -0.95
NFIA-201ENST00000357977 USP35Q9P2H5 1018 aa9.1□□□□□ -0.95
NFIA-201ENST00000357977 HFM1A2PYH4 1435 aa9.1□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms