RNA–Protein interactions for RNA: ENST00000357977.5

NFIA-201, Transcript of nuclear factor I A, humanhuman

TSL 2 BASIC

Gene NFIA, Length 3,200 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFIA-201ENST00000357977 AEBP2Q6ZN18 517 aaPredicted RBP16.25■□□□□ 0.19
NFIA-201ENST00000357977 CHIC1Q5VXU3 224 aa15.55■□□□□ 0.08
NFIA-201ENST00000357977 SENP3Q9H4L4 574 aaPredicted RBP14.05□□□□□ -0.16
NFIA-201ENST00000357977 PHF23Q9BUL5 403 aaPredicted RBP13.66□□□□□ -0.22
NFIA-201ENST00000357977 FOXD1Q16676 465 aa12.95□□□□□ -0.34
NFIA-201ENST00000357977 NISCHQ9Y2I1 1504 aa12.65□□□□□ -0.38
NFIA-201ENST00000357977 MSH5O43196 834 aa12.4□□□□□ -0.42
NFIA-201ENST00000357977 PLPPR3Q6T4P5 718 aa12.31□□□□□ -0.44
NFIA-201ENST00000357977 POTEDQ86YR6 584 aa12.05□□□□□ -0.48
NFIA-201ENST00000357977 PIAS4Q8N2W9 510 aaPredicted RBP11.9□□□□□ -0.5
NFIA-201ENST00000357977 PPP6R1Q9UPN7 881 aa11.87□□□□□ -0.51
NFIA-201ENST00000357977 ADRA2BP18089 450 aa11.75□□□□□ -0.53
NFIA-201ENST00000357977 HRCP23327 699 aa11.38□□□□□ -0.59
NFIA-201ENST00000357977 DMRT2Q9Y5R5 561 aa11.21□□□□□ -0.61
NFIA-201ENST00000357977 SHROOM4Q9ULL8 1493 aa11.21□□□□□ -0.62
NFIA-201ENST00000357977 PELP1Q8IZL8 1130 aaKnown RBP11.18□□□□□ -0.62
NFIA-201ENST00000357977 SUPT5HO00267 1087 aaKnown RBP11.17□□□□□ -0.62
NFIA-201ENST00000357977 PPARGC1BQ86YN6 1023 aaKnown RBP11.13□□□□□ -0.63
NFIA-201ENST00000357977 PCGF6Q9BYE7 350 aa11.13□□□□□ -0.63
NFIA-201ENST00000357977 MYO15BQ96JP2 1530 aa11.1□□□□□ -0.63
NFIA-201ENST00000357977 SCAF1Q9H7N4 1312 aaKnown RBP11.1□□□□□ -0.63
NFIA-201ENST00000357977 DNAJC5BQ9UF47 199 aa10.97□□□□□ -0.65
NFIA-201ENST00000357977 DCAF1Q9Y4B6 1507 aa10.88□□□□□ -0.67
NFIA-201ENST00000357977 HOXD11P31277 338 aaPredicted RBP10.85□□□□□ -0.67
NFIA-201ENST00000357977 MYT1Q01538 1121 aa10.8□□□□□ -0.68
NFIA-201ENST00000357977 MAPK8IP2Q13387 824 aaPredicted RBP10.79□□□□□ -0.68
NFIA-201ENST00000357977 ZCCHC6Q5VYS8 1495 aaKnown RBP10.78□□□□□ -0.68
NFIA-201ENST00000357977 TRIM26Q12899 539 aaPredicted RBP10.78□□□□□ -0.68
NFIA-201ENST00000357977 CCDC180Q9P1Z9 1646 aa10.77□□□□□ -0.69
NFIA-201ENST00000357977 LOC105371045A0A1W2PR82 267 aa10.75□□□□□ -0.69
NFIA-201ENST00000357977 ZEB1P37275 1124 aaPredicted RBP10.72□□□□□ -0.69
NFIA-201ENST00000357977 RNF216Q9NWF9 866 aaPredicted RBP10.68□□□□□ -0.7
NFIA-201ENST00000357977 PPP4R3CPQ6ZMV5 832 aa10.68□□□□□ -0.7
NFIA-201ENST00000357977 CNKSR2Q8WXI2 1034 aa10.67□□□□□ -0.7
NFIA-201ENST00000357977 ACIN1Q9UKV3 1341 aaKnown RBP10.52□□□□□ -0.72
NFIA-201ENST00000357977 RNF39Q9H2S5 420 aa10.51□□□□□ -0.73
NFIA-201ENST00000357977 DCAF8L2P0C7V8 631 aa10.5□□□□□ -0.73
NFIA-201ENST00000357977 NEUROD1Q13562 356 aa10.47□□□□□ -0.73
NFIA-201ENST00000357977 GTF3C3Q9Y5Q9 886 aa10.45□□□□□ -0.74
NFIA-201ENST00000357977 CENPBP07199 599 aaPredicted RBP10.43□□□□□ -0.74
NFIA-201ENST00000357977 C1QBPQ07021 282 aaKnown RBP10.41□□□□□ -0.74
NFIA-201ENST00000357977 NCBP3Q53F19 620 aaKnown RBP10.37□□□□□ -0.75
NFIA-201ENST00000357977 TRIM41Q8WV44 630 aa10.33□□□□□ -0.76
NFIA-201ENST00000357977 FAM9AQ8IZU1 332 aaPredicted RBP10.33□□□□□ -0.76
NFIA-201ENST00000357977 DIEXFQ68CQ4 756 aaKnown RBP10.32□□□□□ -0.76
NFIA-201ENST00000357977 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.31□□□□□ -0.76
NFIA-201ENST00000357977 CACNB1Q02641 598 aaPredicted RBP10.3□□□□□ -0.76
NFIA-201ENST00000357977 CCER1Q8TC90 406 aaPredicted RBP10.3□□□□□ -0.76
NFIA-201ENST00000357977 EHMT2Q96KQ7 1210 aa10.28□□□□□ -0.76
NFIA-201ENST00000357977 ABCC9O60706 1549 aa10.26□□□□□ -0.77
NFIA-201ENST00000357977 RSF1Q96T23 1441 aaPredicted RBP10.19□□□□□ -0.78
NFIA-201ENST00000357977 RB1CC1Q8TDY2 1594 aa10.18□□□□□ -0.78
NFIA-201ENST00000357977 YTHDC1Q96MU7 727 aaKnown RBP10.15□□□□□ -0.78
NFIA-201ENST00000357977 TTBK1Q5TCY1 1321 aaPredicted RBP10.14□□□□□ -0.79
NFIA-201ENST00000357977 ZNF316A6NFI3 1004 aaPredicted RBP10.11□□□□□ -0.79
NFIA-201ENST00000357977 NPM3O75607 178 aaKnown RBP10.07□□□□□ -0.8
NFIA-201ENST00000357977 MIER1Q8N108 512 aa10.05□□□□□ -0.8
NFIA-201ENST00000357977 SCRIBQ14160 1630 aa10.02□□□□□ -0.81
NFIA-201ENST00000357977 BCL11AQ9H165 835 aa10.01□□□□□ -0.81
NFIA-201ENST00000357977 WRNQ14191 1432 aaPredicted RBP eCLIP10□□□□□ -0.81
NFIA-201ENST00000357977 DCAF8L1A6NGE4 600 aa9.98□□□□□ -0.81
NFIA-201ENST00000357977 ANP32EQ9BTT0 268 aa9.98□□□□□ -0.81
NFIA-201ENST00000357977 CLSPNQ9HAW4 1339 aa9.94□□□□□ -0.82
NFIA-201ENST00000357977 CEP162Q5TB80 1403 aa9.94□□□□□ -0.82
NFIA-201ENST00000357977 SUPT16HQ9Y5B9 1047 aaKnown RBP9.92□□□□□ -0.82
NFIA-201ENST00000357977 CECR2Q9BXF3 1484 aa9.89□□□□□ -0.83
NFIA-201ENST00000357977 MROH2BQ7Z745 1585 aa9.89□□□□□ -0.83
NFIA-201ENST00000357977 TSHZ2Q9NRE2 1034 aa9.88□□□□□ -0.83
NFIA-201ENST00000357977 EIF4G1Q04637 1599 aaKnown RBP9.87□□□□□ -0.83
NFIA-201ENST00000357977 WIZO95785 1651 aa9.86□□□□□ -0.83
NFIA-201ENST00000357977 TNIKQ9UKE5 1360 aa9.86□□□□□ -0.83
NFIA-201ENST00000357977 HNRNPUL2Q1KMD3 747 aaKnown RBP9.85□□□□□ -0.83
NFIA-201ENST00000357977 GRWD1Q9BQ67 446 aaKnown RBP eCLIP9.85□□□□□ -0.83
NFIA-201ENST00000357977 CSRNP3Q8WYN3 585 aa9.85□□□□□ -0.83
NFIA-201ENST00000357977 CCDC88BA6NC98 1476 aa9.83□□□□□ -0.84
NFIA-201ENST00000357977 U3KPZ7 1027 aaPredicted RBP9.82□□□□□ -0.84
NFIA-201ENST00000357977 APLP2Q06481 763 aa9.82□□□□□ -0.84
NFIA-201ENST00000357977 ABCC8Q09428 1581 aa9.82□□□□□ -0.84
NFIA-201ENST00000357977 UBTFP17480 764 aaKnown RBP9.8□□□□□ -0.84
NFIA-201ENST00000357977 BAZ1AQ9NRL2 1556 aaPredicted RBP9.8□□□□□ -0.84
NFIA-201ENST00000357977 SOGA1O94964 1423 aa9.8□□□□□ -0.84
NFIA-201ENST00000357977 EEA1Q15075 1411 aa9.75□□□□□ -0.85
NFIA-201ENST00000357977 GOLGA3Q08378 1498 aa9.75□□□□□ -0.85
NFIA-201ENST00000357977 RUSC2Q8N2Y8 1516 aa9.73□□□□□ -0.85
NFIA-201ENST00000357977 NACADO15069 1562 aa9.72□□□□□ -0.85
NFIA-201ENST00000357977 DSG3P32926 999 aa9.72□□□□□ -0.85
NFIA-201ENST00000357977 BCANQ96GW7 911 aa9.71□□□□□ -0.86
NFIA-201ENST00000357977 SLC4A2P04920 1241 aa9.69□□□□□ -0.86
NFIA-201ENST00000357977 DHX57Q6P158 1386 aaKnown RBP9.67□□□□□ -0.86
NFIA-201ENST00000357977 TOP2AP11388 1531 aaKnown RBP9.67□□□□□ -0.86
NFIA-201ENST00000357977 CLIP1P30622 1438 aa9.67□□□□□ -0.86
NFIA-201ENST00000357977 VPS8Q8N3P4 1428 aa9.66□□□□□ -0.86
NFIA-201ENST00000357977 RBM19Q9Y4C8 960 aaKnown RBP9.66□□□□□ -0.86
NFIA-201ENST00000357977 FKBP8Q14318 412 aa9.65□□□□□ -0.86
NFIA-201ENST00000357977 SMARCA2P51531 1590 aa9.65□□□□□ -0.86
NFIA-201ENST00000357977 KCNH8Q96L42 1107 aa9.65□□□□□ -0.87
NFIA-201ENST00000357977 CEP164Q9UPV0 1460 aa9.64□□□□□ -0.87
NFIA-201ENST00000357977 PRKCSHP14314 528 aaPredicted RBP9.62□□□□□ -0.87
NFIA-201ENST00000357977 NEFLP07196 543 aa9.62□□□□□ -0.87
NFIA-201ENST00000357977 KIF21BO75037 1637 aa9.61□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms