RNA–Protein interactions for RNA: ENST00000357867.8

FN1-205, Transcript of fibronectin 1, humanhuman

TSL 1 (best) BASIC

Gene FN1, Length 7,898 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-205ENST00000357867 GOLGA6L2Q8N9W4 650 aaPredicted RBP14.73□□□□□ -0.05
FN1-205ENST00000357867 GOLGA3Q08378 1498 aa14.73□□□□□ -0.05
FN1-205ENST00000357867 CLIP1P30622 1438 aa14.72□□□□□ -0.05
FN1-205ENST00000357867 HDGFP51858 240 aaKnown RBP14.71□□□□□ -0.06
FN1-205ENST00000357867 DCAF1Q9Y4B6 1507 aa14.7□□□□□ -0.06
FN1-205ENST00000357867 MYH16Q9H6N6 1097 aa14.7□□□□□ -0.06
FN1-205ENST00000357867 CFDP1Q9UEE9 299 aaPredicted RBP14.69□□□□□ -0.06
FN1-205ENST00000357867 WRNQ14191 1432 aaPredicted RBP eCLIP14.69□□□□□ -0.06
FN1-205ENST00000357867 KANK1Q14678 1352 aa14.67□□□□□ -0.06
FN1-205ENST00000357867 PDS5BQ9NTI5 1447 aa14.67□□□□□ -0.06
FN1-205ENST00000357867 CDCA8Q53HL2 280 aa14.67□□□□□ -0.06
FN1-205ENST00000357867 ANP32AP39687 249 aaKnown RBP14.66□□□□□ -0.06
FN1-205ENST00000357867 SENP3Q9H4L4 574 aaPredicted RBP14.66□□□□□ -0.06
FN1-205ENST00000357867 ANP32BQ92688 251 aaKnown RBP14.65□□□□□ -0.06
FN1-205ENST00000357867 NPHP1O15259 732 aa14.64□□□□□ -0.07
FN1-205ENST00000357867 RRP7BPQ9NSQ0 103 aa14.62□□□□□ -0.07
FN1-205ENST00000357867 CEP164Q9UPV0 1460 aa14.61□□□□□ -0.07
FN1-205ENST00000357867 ARXQ96QS3 562 aa14.61□□□□□ -0.07
FN1-205ENST00000357867 LMOD2Q6P5Q4 547 aa14.61□□□□□ -0.07
FN1-205ENST00000357867 FHAD1B1AJZ9 1412 aa14.6□□□□□ -0.07
FN1-205ENST00000357867 KAT6BQ8WYB5 2073 aa14.6□□□□□ -0.07
FN1-205ENST00000357867 CFAP53Q96M91 514 aa14.6□□□□□ -0.07
FN1-205ENST00000357867 CARMIL2Q6F5E8 1435 aa14.59□□□□□ -0.07
FN1-205ENST00000357867 POGKQ9P215 609 aa14.59□□□□□ -0.07
FN1-205ENST00000357867 FAM9BQ8IZU0 186 aa14.59□□□□□ -0.07
FN1-205ENST00000357867 SALL2Q9Y467 1007 aaPredicted RBP14.58□□□□□ -0.08
FN1-205ENST00000357867 RGL3Q3MIN7 710 aa14.56□□□□□ -0.08
FN1-205ENST00000357867 CDK11BP21127 795 aaKnown RBP14.56□□□□□ -0.08
FN1-205ENST00000357867 EIF4G2P78344 907 aaKnown RBP eCLIP14.55□□□□□ -0.08
FN1-205ENST00000357867 HNRNPUQ00839 825 aaKnown RBP eCLIP14.55□□□□□ -0.08
FN1-205ENST00000357867 PRDM2Q13029 1718 aa14.53□□□□□ -0.08
FN1-205ENST00000357867 CCNB3Q8WWL7 1395 aa14.52□□□□□ -0.08
FN1-205ENST00000357867 PPM1GO15355 546 aaPredicted RBP14.52□□□□□ -0.08
FN1-205ENST00000357867 DDX10Q13206 875 aaKnown RBP14.52□□□□□ -0.09
FN1-205ENST00000357867 KNSTRNQ9Y448 316 aa14.52□□□□□ -0.09
FN1-205ENST00000357867 CUX2O14529 1486 aa14.51□□□□□ -0.09
FN1-205ENST00000357867 MLECQ14165 292 aa14.51□□□□□ -0.09
FN1-205ENST00000357867 PNNQ9H307 717 aaKnown RBP14.5□□□□□ -0.09
FN1-205ENST00000357867 CECR2Q9BXF3 1484 aa14.49□□□□□ -0.09
FN1-205ENST00000357867 WIZO95785 1651 aa14.48□□□□□ -0.09
FN1-205ENST00000357867 CEP162Q5TB80 1403 aa14.47□□□□□ -0.09
FN1-205ENST00000357867 MRS2Q9HD23 443 aa14.45□□□□□ -0.1
FN1-205ENST00000357867 NUDCQ9Y266 331 aa14.45□□□□□ -0.1
FN1-205ENST00000357867 EIF5BO60841 1220 aaKnown RBP14.45□□□□□ -0.1
FN1-205ENST00000357867 CARMIL1Q5VZK9 1371 aa14.44□□□□□ -0.1
FN1-205ENST00000357867 MAPK8IP3Q9UPT6 1336 aa14.43□□□□□ -0.1
FN1-205ENST00000357867 SOGA1O94964 1423 aa14.42□□□□□ -0.1
FN1-205ENST00000357867 GOLGA2Q08379 1002 aa14.42□□□□□ -0.1
FN1-205ENST00000357867 CASC1Q6TDU7 716 aa14.41□□□□□ -0.1
FN1-205ENST00000357867 GTF3C3Q9Y5Q9 886 aa14.4□□□□□ -0.1
FN1-205ENST00000357867 CARD11Q9BXL7 1154 aa14.4□□□□□ -0.1
FN1-205ENST00000357867 CCDC136Q96JN2 1154 aa14.4□□□□□ -0.1
FN1-205ENST00000357867 AEBP2Q6ZN18 517 aaPredicted RBP14.38□□□□□ -0.11
FN1-205ENST00000357867 FTSJ3Q8IY81 847 aaKnown RBP14.38□□□□□ -0.11
FN1-205ENST00000357867 ABCC8Q09428 1581 aa14.37□□□□□ -0.11
FN1-205ENST00000357867 SMARCA4P51532 1647 aa14.36□□□□□ -0.11
FN1-205ENST00000357867 LAS1LQ9Y4W2 734 aaKnown RBP14.35□□□□□ -0.11
FN1-205ENST00000357867 ARHGAP35Q9NRY4 1499 aa14.35□□□□□ -0.11
FN1-205ENST00000357867 CHMP4BQ9H444 224 aaKnown RBP14.35□□□□□ -0.11
FN1-205ENST00000357867 EID1Q9Y6B2 187 aa14.35□□□□□ -0.11
FN1-205ENST00000357867 SRPK2P78362 688 aaKnown RBP14.34□□□□□ -0.11
FN1-205ENST00000357867 GGT6Q6P531 493 aa14.34□□□□□ -0.11
FN1-205ENST00000357867 TOP2AP11388 1531 aaKnown RBP14.34□□□□□ -0.11
FN1-205ENST00000357867 TMX4Q9H1E5 349 aaPredicted RBP14.34□□□□□ -0.11
FN1-205ENST00000357867 TNIKQ9UKE5 1360 aa14.33□□□□□ -0.12
FN1-205ENST00000357867 FKBP8Q14318 412 aa14.33□□□□□ -0.12
FN1-205ENST00000357867 FMN1Q68DA7 1419 aa14.32□□□□□ -0.12
FN1-205ENST00000357867 EFCAB2Q5VUJ9 269 aa14.3□□□□□ -0.12
FN1-205ENST00000357867 CCDC88BA6NC98 1476 aa14.3□□□□□ -0.12
FN1-205ENST00000357867 NCLP19338 710 aaKnown RBP14.29□□□□□ -0.12
FN1-205ENST00000357867 TMF1P82094 1093 aa14.29□□□□□ -0.12
FN1-205ENST00000357867 PAK3O75914 559 aaPredicted RBP14.29□□□□□ -0.12
FN1-205ENST00000357867 OS9Q13438 667 aaPredicted RBP14.28□□□□□ -0.12
FN1-205ENST00000357867 ZRSR1Q15695 479 aaKnown RBP14.28□□□□□ -0.12
FN1-205ENST00000357867 MYO15BQ96JP2 1530 aa14.27□□□□□ -0.12
FN1-205ENST00000357867 RTF1Q92541 710 aaKnown RBP14.27□□□□□ -0.13
FN1-205ENST00000357867 U2SURPO15042 1029 aaKnown RBP14.26□□□□□ -0.13
FN1-205ENST00000357867 MROH2BQ7Z745 1585 aa14.26□□□□□ -0.13
FN1-205ENST00000357867 MS4A1P11836 297 aa14.26□□□□□ -0.13
FN1-205ENST00000357867 BECN1Q14457 450 aa14.26□□□□□ -0.13
FN1-205ENST00000357867 HDGFL2Q7Z4V5 671 aaPredicted RBP14.26□□□□□ -0.13
FN1-205ENST00000357867 CCDC18Q5T9S5 1454 aa14.26□□□□□ -0.13
FN1-205ENST00000357867 DCAF11Q8TEB1 546 aa14.25□□□□□ -0.13
FN1-205ENST00000357867 CCDC9Q9Y3X0 531 aaKnown RBP14.25□□□□□ -0.13
FN1-205ENST00000357867 TNNT2P45379 298 aaPredicted RBP14.24□□□□□ -0.13
FN1-205ENST00000357867 HIRIP3Q9BW71 556 aaPredicted RBP14.23□□□□□ -0.13
FN1-205ENST00000357867 SOX12O15370 315 aa14.23□□□□□ -0.13
FN1-205ENST00000357867 CSB-PGBD3P0DP91 1061 aa14.23□□□□□ -0.13
FN1-205ENST00000357867 STK26Q9P289 416 aa14.23□□□□□ -0.13
FN1-205ENST00000357867 TULP1O00294 542 aaPredicted RBP14.21□□□□□ -0.13
FN1-205ENST00000357867 OSCARQ8IYS5 282 aa14.21□□□□□ -0.13
FN1-205ENST00000357867 EIF3AQ14152 1382 aaKnown RBP14.21□□□□□ -0.13
FN1-205ENST00000357867 CHMP4AQ9BY43 222 aa14.2□□□□□ -0.14
FN1-205ENST00000357867 RSPH4AQ5TD94 716 aa14.2□□□□□ -0.14
FN1-205ENST00000357867 NEUROD2Q15784 382 aa14.19□□□□□ -0.14
FN1-205ENST00000357867 GOLGA6L22H0YM25 854 aa14.19□□□□□ -0.14
FN1-205ENST00000357867 CADPSQ9ULU8 1353 aa14.19□□□□□ -0.14
FN1-205ENST00000357867 TDRD9Q8NDG6 1382 aaKnown RBP14.19□□□□□ -0.14
FN1-205ENST00000357867 SAFB2Q14151 953 aaKnown RBP eCLIP14.19□□□□□ -0.14
FN1-205ENST00000357867 FGD1P98174 961 aa14.18□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 7.8 ms