RNA–Protein interactions for RNA: ENST00000357447.6

FRMD4A-203, Transcript of FERM domain containing 4A, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene FRMD4A, Length 6,821 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FRMD4A-203ENST00000357447 BECN1Q14457 450 aa22.77■■□□□ 1.24
FRMD4A-203ENST00000357447 LAS1LQ9Y4W2 734 aaKnown RBP22.75■■□□□ 1.23
FRMD4A-203ENST00000357447 RBM19Q9Y4C8 960 aaKnown RBP22.73■■□□□ 1.23
FRMD4A-203ENST00000357447 TRIM44Q96DX7 344 aaPredicted RBP22.72■■□□□ 1.23
FRMD4A-203ENST00000357447 DEKP35659 375 aaKnown RBP22.72■■□□□ 1.23
FRMD4A-203ENST00000357447 KDM2AQ9Y2K7 1162 aa22.68■■□□□ 1.22
FRMD4A-203ENST00000357447 EEA1Q15075 1411 aa22.68■■□□□ 1.22
FRMD4A-203ENST00000357447 ERICH6BQ5W0A0 696 aa22.67■■□□□ 1.22
FRMD4A-203ENST00000357447 SENP3-EIF4A1A0A087X0R7 540 aa22.65■■□□□ 1.22
FRMD4A-203ENST00000357447 TNIKQ9UKE5 1360 aa22.65■■□□□ 1.22
FRMD4A-203ENST00000357447 MTUS2Q5JR59 1369 aa22.65■■□□□ 1.22
FRMD4A-203ENST00000357447 B4GALNT3Q6L9W6 998 aa22.62■■□□□ 1.21
FRMD4A-203ENST00000357447 RSF1Q96T23 1441 aaPredicted RBP22.61■■□□□ 1.21
FRMD4A-203ENST00000357447 RRP7BPQ9NSQ0 103 aa22.59■■□□□ 1.21
FRMD4A-203ENST00000357447 NAP1L5Q96NT1 182 aaPredicted RBP22.59■■□□□ 1.21
FRMD4A-203ENST00000357447 TSHZ2Q9NRE2 1034 aa22.58■■□□□ 1.21
FRMD4A-203ENST00000357447 SIN3AQ96ST3 1273 aa22.55■■□□□ 1.2
FRMD4A-203ENST00000357447 CHGAP10645 457 aaKnown RBP22.54■■□□□ 1.2
FRMD4A-203ENST00000357447 GRWD1Q9BQ67 446 aaKnown RBP eCLIP22.53■■□□□ 1.2
FRMD4A-203ENST00000357447 GOLGA6L22H0YM25 854 aa22.52■■□□□ 1.2
FRMD4A-203ENST00000357447 MYH16Q9H6N6 1097 aa22.48■■□□□ 1.19
FRMD4A-203ENST00000357447 CCER2I3L3R5 266 aa22.47■■□□□ 1.19
FRMD4A-203ENST00000357447 CEP164Q9UPV0 1460 aa22.46■■□□□ 1.19
FRMD4A-203ENST00000357447 NCLP19338 710 aaKnown RBP22.45■■□□□ 1.19
FRMD4A-203ENST00000357447 TNNT2P45379 298 aaPredicted RBP22.45■■□□□ 1.18
FRMD4A-203ENST00000357447 RGS3P49796 1198 aa22.42■■□□□ 1.18
FRMD4A-203ENST00000357447 TSPY4P0CV99 314 aa22.4■■□□□ 1.18
FRMD4A-203ENST00000357447 TSPY10P0CW01 314 aa22.4■■□□□ 1.18
FRMD4A-203ENST00000357447 PTMAP06454 111 aaKnown RBP22.39■■□□□ 1.17
FRMD4A-203ENST00000357447 WRNQ14191 1432 aaPredicted RBP eCLIP22.37■■□□□ 1.17
FRMD4A-203ENST00000357447 RB1CC1Q8TDY2 1594 aa22.35■■□□□ 1.17
FRMD4A-203ENST00000357447 DNTTIP2Q5QJE6 756 aaKnown RBP22.34■■□□□ 1.17
FRMD4A-203ENST00000357447 CCNB3Q8WWL7 1395 aa22.32■■□□□ 1.16
FRMD4A-203ENST00000357447 CARD11Q9BXL7 1154 aa22.31■■□□□ 1.16
FRMD4A-203ENST00000357447 L1TD1Q5T7N2 865 aaKnown RBP22.29■■□□□ 1.16
FRMD4A-203ENST00000357447 STAG3Q9UJ98 1225 aa22.28■■□□□ 1.16
FRMD4A-203ENST00000357447 KNSTRNQ9Y448 316 aa22.28■■□□□ 1.16
FRMD4A-203ENST00000357447 FTSJ3Q8IY81 847 aaKnown RBP22.26■■□□□ 1.15
FRMD4A-203ENST00000357447 ZBTB4Q9P1Z0 1013 aaPredicted RBP22.26■■□□□ 1.15
FRMD4A-203ENST00000357447 TIMELESSQ9UNS1 1208 aa22.26■■□□□ 1.15
FRMD4A-203ENST00000357447 PLPPR3Q6T4P5 718 aa22.24■■□□□ 1.15
FRMD4A-203ENST00000357447 RGL3Q3MIN7 710 aa22.24■■□□□ 1.15
FRMD4A-203ENST00000357447 HSP90AB1P08238 724 aaKnown RBP22.2■■□□□ 1.15
FRMD4A-203ENST00000357447 CASC1Q6TDU7 716 aa22.2■■□□□ 1.14
FRMD4A-203ENST00000357447 FRAT1Q92837 279 aaPredicted RBP22.19■■□□□ 1.14
FRMD4A-203ENST00000357447 TPRNQ4KMQ1 711 aa22.18■■□□□ 1.14
FRMD4A-203ENST00000357447 CC2D1BQ5T0F9 858 aaKnown RBP22.18■■□□□ 1.14
FRMD4A-203ENST00000357447 CFAP53Q96M91 514 aa22.17■■□□□ 1.14
FRMD4A-203ENST00000357447 IPO9Q96P70 1041 aaKnown RBP22.17■■□□□ 1.14
FRMD4A-203ENST00000357447 SOGA1O94964 1423 aa22.17■■□□□ 1.14
FRMD4A-203ENST00000357447 SETD5Q9C0A6 1442 aa22.17■■□□□ 1.14
FRMD4A-203ENST00000357447 HSPA5P11021 654 aaKnown RBP22.17■■□□□ 1.14
FRMD4A-203ENST00000357447 CDCA8Q53HL2 280 aa22.17■■□□□ 1.14
FRMD4A-203ENST00000357447 KIF27Q86VH2 1401 aa22.16■■□□□ 1.14
FRMD4A-203ENST00000357447 NEUROD2Q15784 382 aa22.16■■□□□ 1.14
FRMD4A-203ENST00000357447 HSCBQ8IWL3 235 aa22.13■■□□□ 1.13
FRMD4A-203ENST00000357447 SPRYD3Q8NCJ5 442 aa22.12■■□□□ 1.13
FRMD4A-203ENST00000357447 VPS8Q8N3P4 1428 aa22.12■■□□□ 1.13
FRMD4A-203ENST00000357447 TCERG1O14776 1098 aaKnown RBP22.11■■□□□ 1.13
FRMD4A-203ENST00000357447 MSNP26038 577 aaKnown RBP22.11■■□□□ 1.13
FRMD4A-203ENST00000357447 ARID4BQ4LE39 1312 aaPredicted RBP22.08■■□□□ 1.12
FRMD4A-203ENST00000357447 PLCB2Q00722 1185 aa22.08■■□□□ 1.12
FRMD4A-203ENST00000357447 ESF1Q9H501 851 aaKnown RBP22.07■■□□□ 1.12
FRMD4A-203ENST00000357447 RCAN3Q9UKA8 241 aa22.03■■□□□ 1.12
FRMD4A-203ENST00000357447 CFDP1Q9UEE9 299 aaPredicted RBP22.03■■□□□ 1.12
FRMD4A-203ENST00000357447 RAB3GAP2Q9H2M9 1393 aa22.03■■□□□ 1.12
FRMD4A-203ENST00000357447 ZRSR1Q15695 479 aaKnown RBP22.02■■□□□ 1.12
FRMD4A-203ENST00000357447 A0A0G2JS52 829 aa22.01■■□□□ 1.11
FRMD4A-203ENST00000357447 KANK4Q5T7N3 995 aaPredicted RBP22.01■■□□□ 1.11
FRMD4A-203ENST00000357447 MS4A1P11836 297 aa22.01■■□□□ 1.11
FRMD4A-203ENST00000357447 CDK11BP21127 795 aaKnown RBP22.01■■□□□ 1.11
FRMD4A-203ENST00000357447 PNNQ9H307 717 aaKnown RBP22■■□□□ 1.11
FRMD4A-203ENST00000357447 MAPK8IP3Q9UPT6 1336 aa22■■□□□ 1.11
FRMD4A-203ENST00000357447 KCNH8Q96L42 1107 aa22■■□□□ 1.11
FRMD4A-203ENST00000357447 FHAD1B1AJZ9 1412 aa21.99■■□□□ 1.11
FRMD4A-203ENST00000357447 GZF1Q9H116 711 aaPredicted RBP21.98■■□□□ 1.11
FRMD4A-203ENST00000357447 NUDCQ9Y266 331 aa21.98■■□□□ 1.11
FRMD4A-203ENST00000357447 SENP3Q9H4L4 574 aaPredicted RBP21.97■■□□□ 1.11
FRMD4A-203ENST00000357447 SLKQ9H2G2 1235 aaPredicted RBP21.97■■□□□ 1.11
FRMD4A-203ENST00000357447 PLEKHD1A6NEE1 506 aa21.96■■□□□ 1.11
FRMD4A-203ENST00000357447 CHAF1AQ13111 956 aaPredicted RBP21.95■■□□□ 1.1
FRMD4A-203ENST00000357447 CHMP4BQ9H444 224 aaKnown RBP21.94■■□□□ 1.1
FRMD4A-203ENST00000357447 BAZ1BQ9UIG0 1483 aaKnown RBP21.94■■□□□ 1.1
FRMD4A-203ENST00000357447 TMF1P82094 1093 aa21.94■■□□□ 1.1
FRMD4A-203ENST00000357447 ABCC8Q09428 1581 aa21.93■■□□□ 1.1
FRMD4A-203ENST00000357447 ARHGAP35Q9NRY4 1499 aa21.93■■□□□ 1.1
FRMD4A-203ENST00000357447 FANCIQ9NVI1 1328 aa21.93■■□□□ 1.1
FRMD4A-203ENST00000357447 DCAF11Q8TEB1 546 aa21.92■■□□□ 1.1
FRMD4A-203ENST00000357447 CHMP7Q8WUX9 453 aaPredicted RBP21.92■■□□□ 1.1
FRMD4A-203ENST00000357447 PPP1R15AO75807 674 aaPredicted RBP21.92■■□□□ 1.1
FRMD4A-203ENST00000357447 GOLGA6L3A6NEY3 463 aa21.92■■□□□ 1.1
FRMD4A-203ENST00000357447 KTN1Q86UP2 1357 aaKnown RBP21.92■■□□□ 1.1
FRMD4A-203ENST00000357447 USP35Q9P2H5 1018 aa21.9■■□□□ 1.1
FRMD4A-203ENST00000357447 GBP4Q96PP9 640 aa21.89■■□□□ 1.1
FRMD4A-203ENST00000357447 BAZ1AQ9NRL2 1556 aaPredicted RBP21.89■■□□□ 1.09
FRMD4A-203ENST00000357447 CECR2Q9BXF3 1484 aa21.89■■□□□ 1.09
FRMD4A-203ENST00000357447 GOLGA6L6A8MZA4 724 aa21.88■■□□□ 1.09
FRMD4A-203ENST00000357447 PTMSP20962 102 aa21.88■■□□□ 1.09
FRMD4A-203ENST00000357447 CCDC88BA6NC98 1476 aa21.87■■□□□ 1.09
FRMD4A-203ENST00000357447 NPM1P06748 294 aaKnown RBP eCLIP21.86■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms