RNA–Protein interactions for RNA: ENST00000356175.7

NF1-201, Transcript of neurofibromin 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NF1, Length 12,362 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NF1-201ENST00000356175 CANXP27824 592 aaKnown RBP9.23□□□□□ -0.93
NF1-201ENST00000356175 HNRNPUQ00839 825 aaKnown RBP eCLIP9.23□□□□□ -0.93
NF1-201ENST00000356175 DNTTIP2Q5QJE6 756 aaKnown RBP9.21□□□□□ -0.93
NF1-201ENST00000356175 IL27Q8NEV9 243 aa9.2□□□□□ -0.94
NF1-201ENST00000356175 PDE4CQ08493 712 aa9.2□□□□□ -0.94
NF1-201ENST00000356175 SLC4A1APQ9BWU0 796 aaKnown RBP9.19□□□□□ -0.94
NF1-201ENST00000356175 PTMAP06454 111 aaKnown RBP9.18□□□□□ -0.94
NF1-201ENST00000356175 FAM9BQ8IZU0 186 aa9.15□□□□□ -0.94
NF1-201ENST00000356175 DDX10Q13206 875 aaKnown RBP9.14□□□□□ -0.95
NF1-201ENST00000356175 NCLP19338 710 aaKnown RBP9.13□□□□□ -0.95
NF1-201ENST00000356175 RSPH6AQ9H0K4 717 aa9.13□□□□□ -0.95
NF1-201ENST00000356175 SPRYD3Q8NCJ5 442 aa9.12□□□□□ -0.95
NF1-201ENST00000356175 GZF1Q9H116 711 aaPredicted RBP9.12□□□□□ -0.95
NF1-201ENST00000356175 TNNT3P45378 269 aaPredicted RBP9.12□□□□□ -0.95
NF1-201ENST00000356175 PNNQ9H307 717 aaKnown RBP9.11□□□□□ -0.95
NF1-201ENST00000356175 B4GALNT3Q6L9W6 998 aa9.11□□□□□ -0.95
NF1-201ENST00000356175 ZNF526Q8TF50 670 aaPredicted RBP9.1□□□□□ -0.95
NF1-201ENST00000356175 BRPF3Q9ULD4 1205 aa9.1□□□□□ -0.95
NF1-201ENST00000356175 HIRIP3Q9BW71 556 aaPredicted RBP9.1□□□□□ -0.95
NF1-201ENST00000356175 APPP05067 770 aa9.08□□□□□ -0.96
NF1-201ENST00000356175 PAXIP1Q6ZW49 1069 aaPredicted RBP9.07□□□□□ -0.96
NF1-201ENST00000356175 DDRGK1Q96HY6 314 aa9.06□□□□□ -0.96
NF1-201ENST00000356175 GON4LQ3T8J9 2241 aa9.06□□□□□ -0.96
NF1-201ENST00000356175 UBE2Q2Q8WVN8 375 aa9.06□□□□□ -0.96
NF1-201ENST00000356175 UPF2Q9HAU5 1272 aaKnown RBP9.05□□□□□ -0.96
NF1-201ENST00000356175 FAM50AQ14320 339 aaKnown RBP9.03□□□□□ -0.96
NF1-201ENST00000356175 PPM1GO15355 546 aaPredicted RBP9.02□□□□□ -0.96
NF1-201ENST00000356175 PTMSP20962 102 aa9.01□□□□□ -0.97
NF1-201ENST00000356175 MSNP26038 577 aaKnown RBP9□□□□□ -0.97
NF1-201ENST00000356175 FAM13BQ9NYF5 915 aa8.99□□□□□ -0.97
NF1-201ENST00000356175 ZNF771Q7L3S4 317 aaPredicted RBP8.99□□□□□ -0.97
NF1-201ENST00000356175 BECN1Q14457 450 aa8.99□□□□□ -0.97
NF1-201ENST00000356175 AEBP1Q8IUX7 1158 aa8.98□□□□□ -0.97
NF1-201ENST00000356175 PLCB2Q00722 1185 aa8.98□□□□□ -0.97
NF1-201ENST00000356175 RGS3P49796 1198 aa8.97□□□□□ -0.97
NF1-201ENST00000356175 L1TD1Q5T7N2 865 aaKnown RBP8.97□□□□□ -0.97
NF1-201ENST00000356175 BCL11BQ9C0K0 894 aaPredicted RBP8.97□□□□□ -0.97
NF1-201ENST00000356175 E9PSI1 815 aa8.96□□□□□ -0.97
NF1-201ENST00000356175 CHMP4AQ9BY43 222 aa8.96□□□□□ -0.97
NF1-201ENST00000356175 PATL2C9JE40 543 aaKnown RBP8.96□□□□□ -0.97
NF1-201ENST00000356175 ZMYND15Q9H091 742 aa8.96□□□□□ -0.98
NF1-201ENST00000356175 PRDM10Q9NQV6 1147 aa8.96□□□□□ -0.98
NF1-201ENST00000356175 RBM25P49756 843 aaKnown RBP8.95□□□□□ -0.98
NF1-201ENST00000356175 SLKQ9H2G2 1235 aaPredicted RBP8.95□□□□□ -0.98
NF1-201ENST00000356175 RBM10P98175 930 aaKnown RBP8.93□□□□□ -0.98
NF1-201ENST00000356175 PLCD3Q8N3E9 789 aa8.93□□□□□ -0.98
NF1-201ENST00000356175 PDIA4P13667 645 aaKnown RBP8.93□□□□□ -0.98
NF1-201ENST00000356175 ZHX1Q9UKY1 873 aaPredicted RBP8.92□□□□□ -0.98
NF1-201ENST00000356175 CALRP27797 417 aaKnown RBP8.91□□□□□ -0.98
NF1-201ENST00000356175 AEBP2Q6ZN18 517 aaPredicted RBP8.91□□□□□ -0.98
NF1-201ENST00000356175 SLC4A3P48751 1232 aa8.91□□□□□ -0.98
NF1-201ENST00000356175 PPP4R2Q9NY27 417 aa8.91□□□□□ -0.98
NF1-201ENST00000356175 CHAF1AQ13111 956 aaPredicted RBP8.9□□□□□ -0.98
NF1-201ENST00000356175 CFAP65Q6ZU64 1925 aaKnown RBP8.9□□□□□ -0.98
NF1-201ENST00000356175 MRS2Q9HD23 443 aa8.9□□□□□ -0.99
NF1-201ENST00000356175 BBXQ8WY36 941 aaPredicted RBP8.87□□□□□ -0.99
NF1-201ENST00000356175 IPO9Q96P70 1041 aaKnown RBP8.86□□□□□ -0.99
NF1-201ENST00000356175 GOLGA6L22H0YM25 854 aa8.86□□□□□ -0.99
NF1-201ENST00000356175 GOLGA6L3A6NEY3 463 aa8.85□□□□□ -0.99
NF1-201ENST00000356175 TAF7LQ5H9L4 462 aa8.85□□□□□ -0.99
NF1-201ENST00000356175 CHMP4BQ9H444 224 aaKnown RBP8.84□□□□□ -0.99
NF1-201ENST00000356175 AK9Q5TCS8 1911 aa8.84□□□□□ -0.99
NF1-201ENST00000356175 DRC7Q8IY82 874 aa8.84□□□□□ -0.99
NF1-201ENST00000356175 TAOK2Q9UL54 1235 aa8.83□□□□□ -1
NF1-201ENST00000356175 HSP90AB1P08238 724 aaKnown RBP8.83□□□□□ -1
NF1-201ENST00000356175 KCNH8Q96L42 1107 aa8.83□□□□□ -1
NF1-201ENST00000356175 TNNT1P13805 278 aa8.83□□□□□ -1
NF1-201ENST00000356175 VGLL3A8MV65 326 aa8.82□□□□□ -1
NF1-201ENST00000356175 MSH5O43196 834 aa8.81□□□□□ -1
NF1-201ENST00000356175 GSE1Q14687 1217 aa8.81□□□□□ -1
NF1-201ENST00000356175 FOXD4L1Q9NU39 408 aa8.81□□□□□ -1
NF1-201ENST00000356175 FRAT1Q92837 279 aaPredicted RBP8.8□□□□□ -1
NF1-201ENST00000356175 PAK3O75914 559 aaPredicted RBP8.8□□□□□ -1
NF1-201ENST00000356175 GOLGA6L2Q8N9W4 650 aaPredicted RBP8.79□□□□□ -1
NF1-201ENST00000356175 BAZ1BQ9UIG0 1483 aaKnown RBP8.79□□□□□ -1
NF1-201ENST00000356175 WWC1Q8IX03 1113 aa8.79□□□□□ -1
NF1-201ENST00000356175 MEX3CQ5U5Q3 659 aaKnown RBP8.79□□□□□ -1
NF1-201ENST00000356175 MICAL3Q7RTP6 2002 aa8.78□□□□□ -1
NF1-201ENST00000356175 DHX37Q8IY37 1157 aaKnown RBP8.78□□□□□ -1
NF1-201ENST00000356175 TRERF1Q96PN7 1200 aa8.77□□□□□ -1.01
NF1-201ENST00000356175 NAP1L2Q9ULW6 460 aaPredicted RBP8.76□□□□□ -1.01
NF1-201ENST00000356175 FOXD4L5Q5VV16 416 aaPredicted RBP8.76□□□□□ -1.01
NF1-201ENST00000356175 FOXD4L4Q8WXT5 416 aaPredicted RBP8.76□□□□□ -1.01
NF1-201ENST00000356175 KIAA2012Q0VF49 1180 aa8.75□□□□□ -1.01
NF1-201ENST00000356175 ERICH4A6NGS2 130 aa8.75□□□□□ -1.01
NF1-201ENST00000356175 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP8.75□□□□□ -1.01
NF1-201ENST00000356175 ZFP91Q96JP5 570 aaPredicted RBP8.75□□□□□ -1.01
NF1-201ENST00000356175 TMC1Q8TDI8 760 aa8.74□□□□□ -1.01
NF1-201ENST00000356175 R3HCC1Q9Y3T6 440 aaKnown RBP8.74□□□□□ -1.01
NF1-201ENST00000356175 FANCIQ9NVI1 1328 aa8.74□□□□□ -1.01
NF1-201ENST00000356175 RRP9O43818 475 aaKnown RBP8.73□□□□□ -1.01
NF1-201ENST00000356175 HSCBQ8IWL3 235 aa8.73□□□□□ -1.01
NF1-201ENST00000356175 C14orf37Q86TY3 774 aa8.73□□□□□ -1.01
NF1-201ENST00000356175 TULP1O00294 542 aaPredicted RBP8.73□□□□□ -1.01
NF1-201ENST00000356175 TONSLQ96HA7 1378 aa8.73□□□□□ -1.01
NF1-201ENST00000356175 P3H3Q8IVL6 736 aa8.72□□□□□ -1.01
NF1-201ENST00000356175 GPATCH11Q8N954 259 aa8.72□□□□□ -1.01
NF1-201ENST00000356175 WDR43Q15061 677 aaKnown RBP eCLIP8.72□□□□□ -1.01
NF1-201ENST00000356175 GOLGA6L6A8MZA4 724 aa8.71□□□□□ -1.01
NF1-201ENST00000356175 CGNQ9P2M7 1197 aaKnown RBP8.71□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms