RNA–Protein interactions for RNA: ENST00000355703.3

PCNX3-201, Transcript of pecanex 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PCNX3, Length 7,105 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX3-201ENST00000355703 FBXO3Q9UK99 471 aa21.18■□□□□ 0.98
PCNX3-201ENST00000355703 PPP1R15AO75807 674 aaPredicted RBP21.17■□□□□ 0.98
PCNX3-201ENST00000355703 KDM2AQ9Y2K7 1162 aa21.15■□□□□ 0.98
PCNX3-201ENST00000355703 PPM1GO15355 546 aaPredicted RBP21.14■□□□□ 0.97
PCNX3-201ENST00000355703 SENP3-EIF4A1A0A087X0R7 540 aa21.13■□□□□ 0.97
PCNX3-201ENST00000355703 PLCB2Q00722 1185 aa21.12■□□□□ 0.97
PCNX3-201ENST00000355703 WDR43Q15061 677 aaKnown RBP eCLIP21.12■□□□□ 0.97
PCNX3-201ENST00000355703 GOLGA6L2Q8N9W4 650 aaPredicted RBP21.12■□□□□ 0.97
PCNX3-201ENST00000355703 GOLGA2Q08379 1002 aa21.11■□□□□ 0.97
PCNX3-201ENST00000355703 DNTTIP2Q5QJE6 756 aaKnown RBP21.11■□□□□ 0.97
PCNX3-201ENST00000355703 PTMAP06454 111 aaKnown RBP21.09■□□□□ 0.97
PCNX3-201ENST00000355703 FKBP8Q14318 412 aa21.09■□□□□ 0.97
PCNX3-201ENST00000355703 TRIM44Q96DX7 344 aaPredicted RBP21.08■□□□□ 0.97
PCNX3-201ENST00000355703 LAS1LQ9Y4W2 734 aaKnown RBP21.05■□□□□ 0.96
PCNX3-201ENST00000355703 HNRNPUQ00839 825 aaKnown RBP eCLIP21.01■□□□□ 0.95
PCNX3-201ENST00000355703 TMC1Q8TDI8 760 aa21.01■□□□□ 0.95
PCNX3-201ENST00000355703 IRX6P78412 446 aaPredicted RBP21■□□□□ 0.95
PCNX3-201ENST00000355703 TRHP20396 242 aaPredicted RBP20.97■□□□□ 0.95
PCNX3-201ENST00000355703 CCDC136Q96JN2 1154 aa20.95■□□□□ 0.94
PCNX3-201ENST00000355703 ERICH6BQ5W0A0 696 aa20.94■□□□□ 0.94
PCNX3-201ENST00000355703 CHIC2Q9UKJ5 165 aa20.94■□□□□ 0.94
PCNX3-201ENST00000355703 FGD1P98174 961 aa20.94■□□□□ 0.94
PCNX3-201ENST00000355703 OS9Q13438 667 aaPredicted RBP20.9■□□□□ 0.94
PCNX3-201ENST00000355703 SOX12O15370 315 aa20.86■□□□□ 0.93
PCNX3-201ENST00000355703 TNNT2P45379 298 aaPredicted RBP20.86■□□□□ 0.93
PCNX3-201ENST00000355703 WWC1Q8IX03 1113 aa20.84■□□□□ 0.93
PCNX3-201ENST00000355703 ZNF330Q9Y3S2 320 aaPredicted RBP20.8■□□□□ 0.92
PCNX3-201ENST00000355703 KCNJ4P48050 445 aa20.8■□□□□ 0.92
PCNX3-201ENST00000355703 KCNH8Q96L42 1107 aa20.8■□□□□ 0.92
PCNX3-201ENST00000355703 CASC1Q6TDU7 716 aa20.79■□□□□ 0.92
PCNX3-201ENST00000355703 CCDC9Q9Y3X0 531 aaKnown RBP20.79■□□□□ 0.92
PCNX3-201ENST00000355703 NOC3LQ8WTT2 800 aaKnown RBP20.79■□□□□ 0.92
PCNX3-201ENST00000355703 DDX10Q13206 875 aaKnown RBP20.78■□□□□ 0.92
PCNX3-201ENST00000355703 NEUROD2Q15784 382 aa20.77■□□□□ 0.92
PCNX3-201ENST00000355703 GOLGA6L22H0YM25 854 aa20.77■□□□□ 0.91
PCNX3-201ENST00000355703 HIRIP3Q9BW71 556 aaPredicted RBP20.72■□□□□ 0.91
PCNX3-201ENST00000355703 TONSLQ96HA7 1378 aa20.72■□□□□ 0.91
PCNX3-201ENST00000355703 PNNQ9H307 717 aaKnown RBP20.7■□□□□ 0.9
PCNX3-201ENST00000355703 GOLGA6L6A8MZA4 724 aa20.69■□□□□ 0.9
PCNX3-201ENST00000355703 FTSJ3Q8IY81 847 aaKnown RBP20.68■□□□□ 0.9
PCNX3-201ENST00000355703 G3V3G9 751 aa20.67■□□□□ 0.9
PCNX3-201ENST00000355703 DCAF8Q5TAQ9 597 aa20.67■□□□□ 0.9
PCNX3-201ENST00000355703 NAP1L5Q96NT1 182 aaPredicted RBP20.66■□□□□ 0.9
PCNX3-201ENST00000355703 TMX4Q9H1E5 349 aaPredicted RBP20.66■□□□□ 0.9
PCNX3-201ENST00000355703 GNL2Q13823 731 aaKnown RBP20.66■□□□□ 0.9
PCNX3-201ENST00000355703 BECN1Q14457 450 aa20.66■□□□□ 0.9
PCNX3-201ENST00000355703 CNKSR2Q8WXI2 1034 aa20.66■□□□□ 0.9
PCNX3-201ENST00000355703 RTN4Q9NQC3 1192 aaKnown RBP20.65■□□□□ 0.9
PCNX3-201ENST00000355703 RGL3Q3MIN7 710 aa20.64■□□□□ 0.9
PCNX3-201ENST00000355703 DRC7Q8IY82 874 aa20.64■□□□□ 0.89
PCNX3-201ENST00000355703 ARID3AQ99856 593 aa20.62■□□□□ 0.89
PCNX3-201ENST00000355703 MLECQ14165 292 aa20.62■□□□□ 0.89
PCNX3-201ENST00000355703 KIAA2012Q0VF49 1180 aa20.61■□□□□ 0.89
PCNX3-201ENST00000355703 VPS53Q5VIR6 699 aa20.61■□□□□ 0.89
PCNX3-201ENST00000355703 MRS2Q9HD23 443 aa20.6■□□□□ 0.89
PCNX3-201ENST00000355703 A0A0U1RQG5 324 aaPredicted RBP20.6■□□□□ 0.89
PCNX3-201ENST00000355703 ABCC9O60706 1549 aa20.6■□□□□ 0.89
PCNX3-201ENST00000355703 CREBRFQ8IUR6 639 aa20.58■□□□□ 0.89
PCNX3-201ENST00000355703 GOLGA6L4A6NEF3 574 aa20.56■□□□□ 0.88
PCNX3-201ENST00000355703 KLHL34Q8N239 644 aa20.56■□□□□ 0.88
PCNX3-201ENST00000355703 SPRYD3Q8NCJ5 442 aa20.55■□□□□ 0.88
PCNX3-201ENST00000355703 PHF23Q9BUL5 403 aaPredicted RBP20.55■□□□□ 0.88
PCNX3-201ENST00000355703 HSP90AB1P08238 724 aaKnown RBP20.52■□□□□ 0.88
PCNX3-201ENST00000355703 FRAT1Q92837 279 aaPredicted RBP20.52■□□□□ 0.88
PCNX3-201ENST00000355703 POGKQ9P215 609 aa20.52■□□□□ 0.87
PCNX3-201ENST00000355703 TSPY4P0CV99 314 aa20.5■□□□□ 0.87
PCNX3-201ENST00000355703 TSPY10P0CW01 314 aa20.5■□□□□ 0.87
PCNX3-201ENST00000355703 MSH5O43196 834 aa20.49■□□□□ 0.87
PCNX3-201ENST00000355703 APBB1O00213 710 aa20.49■□□□□ 0.87
PCNX3-201ENST00000355703 U2SURPO15042 1029 aaKnown RBP20.47■□□□□ 0.87
PCNX3-201ENST00000355703 AEBP2Q6ZN18 517 aaPredicted RBP20.47■□□□□ 0.87
PCNX3-201ENST00000355703 MAPK8IP3Q9UPT6 1336 aa20.47■□□□□ 0.87
PCNX3-201ENST00000355703 CFAP53Q96M91 514 aa20.46■□□□□ 0.87
PCNX3-201ENST00000355703 PAK3O75914 559 aaPredicted RBP20.46■□□□□ 0.87
PCNX3-201ENST00000355703 NRDCO43847 1150 aa20.45■□□□□ 0.86
PCNX3-201ENST00000355703 CSB-PGBD3P0DP91 1061 aa20.44■□□□□ 0.86
PCNX3-201ENST00000355703 RGS3P49796 1198 aa20.44■□□□□ 0.86
PCNX3-201ENST00000355703 PATL2C9JE40 543 aaKnown RBP20.43■□□□□ 0.86
PCNX3-201ENST00000355703 CHAF1AQ13111 956 aaPredicted RBP20.43■□□□□ 0.86
PCNX3-201ENST00000355703 CHMP3Q9Y3E7 222 aa20.43■□□□□ 0.86
PCNX3-201ENST00000355703 EIF4G2P78344 907 aaKnown RBP eCLIP20.41■□□□□ 0.86
PCNX3-201ENST00000355703 HSP90B1P14625 803 aaKnown RBP20.41■□□□□ 0.86
PCNX3-201ENST00000355703 DDRGK1Q96HY6 314 aa20.41■□□□□ 0.86
PCNX3-201ENST00000355703 RAD21O60216 631 aa20.4■□□□□ 0.86
PCNX3-201ENST00000355703 ANP32EQ9BTT0 268 aa20.39■□□□□ 0.86
PCNX3-201ENST00000355703 CHMP7Q8WUX9 453 aaPredicted RBP20.39■□□□□ 0.85
PCNX3-201ENST00000355703 SAFB2Q14151 953 aaKnown RBP eCLIP20.39■□□□□ 0.85
PCNX3-201ENST00000355703 RASSF8Q8NHQ8 419 aa20.37■□□□□ 0.85
PCNX3-201ENST00000355703 L1TD1Q5T7N2 865 aaKnown RBP20.34■□□□□ 0.85
PCNX3-201ENST00000355703 ACIN1Q9UKV3 1341 aaKnown RBP20.33■□□□□ 0.85
PCNX3-201ENST00000355703 RRP7BPQ9NSQ0 103 aa20.33■□□□□ 0.85
PCNX3-201ENST00000355703 CWC22Q9HCG8 908 aaKnown RBP20.33■□□□□ 0.84
PCNX3-201ENST00000355703 CEP89Q96ST8 783 aa20.32■□□□□ 0.84
PCNX3-201ENST00000355703 MARCH6O60337 910 aa20.32■□□□□ 0.84
PCNX3-201ENST00000355703 FRAT2O75474 233 aaPredicted RBP20.3■□□□□ 0.84
PCNX3-201ENST00000355703 KNSTRNQ9Y448 316 aa20.3■□□□□ 0.84
PCNX3-201ENST00000355703 TAF7LQ5H9L4 462 aa20.29■□□□□ 0.84
PCNX3-201ENST00000355703 SAMD1Q6SPF0 538 aaPredicted RBP20.29■□□□□ 0.84
PCNX3-201ENST00000355703 GORABQ5T7V8 394 aa20.29■□□□□ 0.84
PCNX3-201ENST00000355703 CC2D1BQ5T0F9 858 aaKnown RBP20.28■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms