RNA–Protein interactions for RNA: ENST00000353247.9

CASP1-201, Transcript of caspase 1, humanhuman

TSL 1 (best) BASIC

Gene CASP1, Length 423 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASP1-201ENST00000353247 PHF12Q96QT6 1004 aa9.96□□□□□ -0.82
CASP1-201ENST00000353247 STAG3Q9UJ98 1225 aa9.96□□□□□ -0.82
CASP1-201ENST00000353247 CREBZFQ9NS37 354 aa9.95□□□□□ -0.82
CASP1-201ENST00000353247 ATMINO43313 823 aaPredicted RBP9.93□□□□□ -0.82
CASP1-201ENST00000353247 ZBTB22O15209 634 aa9.92□□□□□ -0.82
CASP1-201ENST00000353247 NPM1P06748 294 aaKnown RBP eCLIP9.9□□□□□ -0.82
CASP1-201ENST00000353247 MS4A3Q96HJ5 214 aa9.84□□□□□ -0.83
CASP1-201ENST00000353247 MMRN1Q13201 1228 aa9.82□□□□□ -0.84
CASP1-201ENST00000353247 SPNS2Q8IVW8 549 aa9.75□□□□□ -0.85
CASP1-201ENST00000353247 ATN1P54259 1190 aaPredicted RBP9.74□□□□□ -0.85
CASP1-201ENST00000353247 TMEM121BQ9BXQ6 578 aaPredicted RBP9.72□□□□□ -0.85
CASP1-201ENST00000353247 POTEFA5A3E0 1075 aa9.67□□□□□ -0.86
CASP1-201ENST00000353247 ST18O60284 1047 aa9.67□□□□□ -0.86
CASP1-201ENST00000353247 MNX1P50219 401 aaPredicted RBP9.67□□□□□ -0.86
CASP1-201ENST00000353247 TIE1P35590 1138 aa9.66□□□□□ -0.86
CASP1-201ENST00000353247 SEC24BO95487 1268 aa9.65□□□□□ -0.86
CASP1-201ENST00000353247 IER5LQ5T953 404 aa9.64□□□□□ -0.87
CASP1-201ENST00000353247 BMP2KQ9NSY1 1161 aaPredicted RBP9.64□□□□□ -0.87
CASP1-201ENST00000353247 SLAIN1Q8ND83 568 aa9.6□□□□□ -0.87
CASP1-201ENST00000353247 CCDC61Q9Y6R9 512 aa9.58□□□□□ -0.88
CASP1-201ENST00000353247 SNPHO15079 494 aa9.56□□□□□ -0.88
CASP1-201ENST00000353247 KIF12Q96FN5 646 aa9.56□□□□□ -0.88
CASP1-201ENST00000353247 COLQQ9Y215 455 aaPredicted RBP9.55□□□□□ -0.88
CASP1-201ENST00000353247 TSPYL2Q9H2G4 693 aaPredicted RBP9.51□□□□□ -0.89
CASP1-201ENST00000353247 TTLL13PA6NNM8 815 aa9.5□□□□□ -0.89
CASP1-201ENST00000353247 TRIM35Q9UPQ4 493 aa9.45□□□□□ -0.9
CASP1-201ENST00000353247 TRPC6Q9Y210 931 aa9.44□□□□□ -0.9
CASP1-201ENST00000353247 SGIP1Q9BQI5 828 aa9.43□□□□□ -0.9
CASP1-201ENST00000353247 MAP3K13O43283 966 aa9.42□□□□□ -0.9
CASP1-201ENST00000353247 PLCG2P16885 1265 aa9.42□□□□□ -0.9
CASP1-201ENST00000353247 SPDYE4A6NLX3 237 aa9.41□□□□□ -0.9
CASP1-201ENST00000353247 MARVELD3Q96A59 401 aa9.38□□□□□ -0.91
CASP1-201ENST00000353247 EMP3P54852 163 aa9.37□□□□□ -0.91
CASP1-201ENST00000353247 EIF2AK3Q9NZJ5 1116 aaKnown RBP9.35□□□□□ -0.91
CASP1-201ENST00000353247 KRTAP3-3Q9BYR6 98 aa9.34□□□□□ -0.91
CASP1-201ENST00000353247 KRTAP3-2Q9BYR7 98 aa9.34□□□□□ -0.91
CASP1-201ENST00000353247 PLEKHG5O94827 1062 aa9.32□□□□□ -0.92
CASP1-201ENST00000353247 IRX5P78411 483 aaPredicted RBP9.29□□□□□ -0.92
CASP1-201ENST00000353247 HS3ST6Q96QI5 342 aa9.29□□□□□ -0.92
CASP1-201ENST00000353247 PCDHB13Q9Y5F0 798 aa9.28□□□□□ -0.92
CASP1-201ENST00000353247 OCEL1Q9H607 264 aa9.26□□□□□ -0.93
CASP1-201ENST00000353247 RNF166Q96A37 237 aaPredicted RBP9.24□□□□□ -0.93
CASP1-201ENST00000353247 TMEM106CQ9BVX2 250 aa9.23□□□□□ -0.93
CASP1-201ENST00000353247 RASEFQ8IZ41 740 aa9.21□□□□□ -0.94
CASP1-201ENST00000353247 FAM205CA6NFA0 338 aa9.2□□□□□ -0.94
CASP1-201ENST00000353247 C3orf67Q6ZVT6 689 aa9.19□□□□□ -0.94
CASP1-201ENST00000353247 IFNL1Q8IU54 200 aa9.15□□□□□ -0.94
CASP1-201ENST00000353247 PTGER2P43116 358 aa9.14□□□□□ -0.95
CASP1-201ENST00000353247 POTEB3A0JP26 581 aa9.13□□□□□ -0.95
CASP1-201ENST00000353247 POTEBQ6S5H4 581 aa9.13□□□□□ -0.95
CASP1-201ENST00000353247 MYT1LQ9UL68 1186 aa9.12□□□□□ -0.95
CASP1-201ENST00000353247 PROM2Q8N271 834 aa9.1□□□□□ -0.95
CASP1-201ENST00000353247 ZBTB47Q9UFB7 747 aaPredicted RBP9.1□□□□□ -0.95
CASP1-201ENST00000353247 L3MBTL3Q96JM7 780 aaPredicted RBP9.09□□□□□ -0.95
CASP1-201ENST00000353247 MIER1Q8N108 512 aa9.05□□□□□ -0.96
CASP1-201ENST00000353247 FAM212AQ96EL1 285 aa9.05□□□□□ -0.96
CASP1-201ENST00000353247 PDCD7Q8N8D1 485 aaKnown RBP9.01□□□□□ -0.97
CASP1-201ENST00000353247 HOXB1P14653 301 aaPredicted RBP8.99□□□□□ -0.97
CASP1-201ENST00000353247 ERBB3P21860 1342 aa8.98□□□□□ -0.97
CASP1-201ENST00000353247 ZNF710Q8N1W2 664 aa8.97□□□□□ -0.97
CASP1-201ENST00000353247 NUBP1P53384 320 aa8.95□□□□□ -0.98
CASP1-201ENST00000353247 GOLGA2Q08379 1002 aa8.94□□□□□ -0.98
CASP1-201ENST00000353247 DOK7Q18PE1 504 aa8.94□□□□□ -0.98
CASP1-201ENST00000353247 RIMBP2O15034 1052 aa8.93□□□□□ -0.98
CASP1-201ENST00000353247 MKRN3Q13064 507 aaKnown RBP8.92□□□□□ -0.98
CASP1-201ENST00000353247 PLCD3Q8N3E9 789 aa8.92□□□□□ -0.98
CASP1-201ENST00000353247 HOXB3P14651 431 aaPredicted RBP8.91□□□□□ -0.98
CASP1-201ENST00000353247 VARS2Q5ST30 1063 aaKnown RBP8.88□□□□□ -0.99
CASP1-201ENST00000353247 ZNF687Q8N1G0 1237 aa8.87□□□□□ -0.99
CASP1-201ENST00000353247 G3V3G9 751 aa8.86□□□□□ -0.99
CASP1-201ENST00000353247 DCAF8Q5TAQ9 597 aa8.86□□□□□ -0.99
CASP1-201ENST00000353247 PLA2G2EQ9NZK7 142 aa8.86□□□□□ -0.99
CASP1-201ENST00000353247 ZSWIM6Q9HCJ5 1215 aa8.85□□□□□ -0.99
CASP1-201ENST00000353247 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP8.85□□□□□ -0.99
CASP1-201ENST00000353247 NISCHQ9Y2I1 1504 aa8.82□□□□□ -1
CASP1-201ENST00000353247 ZNF467Q7Z7K2 595 aaPredicted RBP8.82□□□□□ -1
CASP1-201ENST00000353247 ILDR1Q86SU0 546 aaPredicted RBP8.82□□□□□ -1
CASP1-201ENST00000353247 PCDHB8Q9UN66 801 aa8.78□□□□□ -1
CASP1-201ENST00000353247 BOLA1Q9Y3E2 137 aa8.78□□□□□ -1
CASP1-201ENST00000353247 HCSTQ9UBK5 93 aa8.77□□□□□ -1.01
CASP1-201ENST00000353247 PYGBP11216 843 aa8.76□□□□□ -1.01
CASP1-201ENST00000353247 RGS20O76081 388 aa8.73□□□□□ -1.01
CASP1-201ENST00000353247 CSRNP3Q8WYN3 585 aa8.73□□□□□ -1.01
CASP1-201ENST00000353247 LSM11P83369 360 aaKnown RBP eCLIP8.72□□□□□ -1.01
CASP1-201ENST00000353247 ANKRD13DQ6ZTN6 518 aa8.72□□□□□ -1.01
CASP1-201ENST00000353247 PBX2P40425 430 aa8.68□□□□□ -1.02
CASP1-201ENST00000353247 PSEN1P49768 467 aa8.65□□□□□ -1.02
CASP1-201ENST00000353247 GPR153Q6NV75 609 aa8.63□□□□□ -1.03
CASP1-201ENST00000353247 IRX2Q9BZI1 471 aaPredicted RBP8.63□□□□□ -1.03
CASP1-201ENST00000353247 DPY19L2Q6NUT2 758 aa8.62□□□□□ -1.03
CASP1-201ENST00000353247 PDAP1Q13442 181 aaKnown RBP8.6□□□□□ -1.03
CASP1-201ENST00000353247 GSE1Q14687 1217 aa8.6□□□□□ -1.03
CASP1-201ENST00000353247 CHRM1P11229 460 aaPredicted RBP8.59□□□□□ -1.03
CASP1-201ENST00000353247 ZNF316A6NFI3 1004 aaPredicted RBP8.57□□□□□ -1.04
CASP1-201ENST00000353247 IFFO2Q5TF58 517 aa8.52□□□□□ -1.05
CASP1-201ENST00000353247 CABP2Q9NPB3 220 aa8.52□□□□□ -1.05
CASP1-201ENST00000353247 ARSIQ5FYB1 569 aa8.48□□□□□ -1.05
CASP1-201ENST00000353247 ADGRD1Q6QNK2 874 aa8.46□□□□□ -1.06
CASP1-201ENST00000353247 MICALL2Q8IY33 904 aa8.46□□□□□ -1.06
CASP1-201ENST00000353247 TMEM92Q6UXU6 159 aa8.43□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 98.6 ms