RNA–Protein interactions for RNA: ENST00000341329.7

RHBDD1-201, Transcript of rhomboid domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RHBDD1, Length 4,883 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDD1-201ENST00000341329 TOP2AP11388 1531 aaKnown RBP16.21■□□□□ 0.18
RHBDD1-201ENST00000341329 UPF2Q9HAU5 1272 aaKnown RBP16.15■□□□□ 0.18
RHBDD1-201ENST00000341329 SMARCA2P51531 1590 aa16.15■□□□□ 0.18
RHBDD1-201ENST00000341329 NPM2Q86SE8 214 aaKnown RBP16.12■□□□□ 0.17
RHBDD1-201ENST00000341329 CCER2I3L3R5 266 aa16.12■□□□□ 0.17
RHBDD1-201ENST00000341329 RRP7BPQ9NSQ0 103 aa16.09■□□□□ 0.17
RHBDD1-201ENST00000341329 ABCC8Q09428 1581 aa16.09■□□□□ 0.17
RHBDD1-201ENST00000341329 SETD5Q9C0A6 1442 aa16.08■□□□□ 0.17
RHBDD1-201ENST00000341329 WDR43Q15061 677 aaKnown RBP eCLIP16.08■□□□□ 0.17
RHBDD1-201ENST00000341329 CARMIL1Q5VZK9 1371 aa16.08■□□□□ 0.16
RHBDD1-201ENST00000341329 ANP32EQ9BTT0 268 aa16.07■□□□□ 0.16
RHBDD1-201ENST00000341329 SUPT16HQ9Y5B9 1047 aaKnown RBP16.05■□□□□ 0.16
RHBDD1-201ENST00000341329 WIZO95785 1651 aa16.05■□□□□ 0.16
RHBDD1-201ENST00000341329 CHMP7Q8WUX9 453 aaPredicted RBP16.03■□□□□ 0.16
RHBDD1-201ENST00000341329 CUX2O14529 1486 aa16.03■□□□□ 0.16
RHBDD1-201ENST00000341329 DDRGK1Q96HY6 314 aa16.03■□□□□ 0.16
RHBDD1-201ENST00000341329 HIRIP3Q9BW71 556 aaPredicted RBP16.03■□□□□ 0.16
RHBDD1-201ENST00000341329 PPP4R2Q9NY27 417 aa16.03■□□□□ 0.16
RHBDD1-201ENST00000341329 PLEKHD1A6NEE1 506 aa16.02■□□□□ 0.15
RHBDD1-201ENST00000341329 ERICH6BQ5W0A0 696 aa16.01■□□□□ 0.15
RHBDD1-201ENST00000341329 ARHGAP35Q9NRY4 1499 aa16.01■□□□□ 0.15
RHBDD1-201ENST00000341329 CDCA8Q53HL2 280 aa16■□□□□ 0.15
RHBDD1-201ENST00000341329 ANP32BQ92688 251 aaKnown RBP16■□□□□ 0.15
RHBDD1-201ENST00000341329 SIN3AQ96ST3 1273 aa15.98■□□□□ 0.15
RHBDD1-201ENST00000341329 KDM2AQ9Y2K7 1162 aa15.98■□□□□ 0.15
RHBDD1-201ENST00000341329 CFDP1Q9UEE9 299 aaPredicted RBP15.97■□□□□ 0.15
RHBDD1-201ENST00000341329 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.95■□□□□ 0.14
RHBDD1-201ENST00000341329 FMN1Q68DA7 1419 aa15.94■□□□□ 0.14
RHBDD1-201ENST00000341329 IRX6P78412 446 aaPredicted RBP15.94■□□□□ 0.14
RHBDD1-201ENST00000341329 SMARCA4P51532 1647 aa15.93■□□□□ 0.14
RHBDD1-201ENST00000341329 NPM1P06748 294 aaKnown RBP eCLIP15.93■□□□□ 0.14
RHBDD1-201ENST00000341329 SALL2Q9Y467 1007 aaPredicted RBP15.93■□□□□ 0.14
RHBDD1-201ENST00000341329 HSP90AA1P07900 732 aaKnown RBP15.92■□□□□ 0.14
RHBDD1-201ENST00000341329 SLC24A1O60721 1099 aa15.91■□□□□ 0.14
RHBDD1-201ENST00000341329 RAB3GAP2Q9H2M9 1393 aa15.91■□□□□ 0.14
RHBDD1-201ENST00000341329 CARD11Q9BXL7 1154 aa15.91■□□□□ 0.14
RHBDD1-201ENST00000341329 CHGAP10645 457 aaKnown RBP15.9■□□□□ 0.14
RHBDD1-201ENST00000341329 NBR1Q14596 966 aa15.9■□□□□ 0.14
RHBDD1-201ENST00000341329 KANK4Q5T7N3 995 aaPredicted RBP15.9■□□□□ 0.14
RHBDD1-201ENST00000341329 BECN1Q14457 450 aa15.89■□□□□ 0.13
RHBDD1-201ENST00000341329 PPM1GO15355 546 aaPredicted RBP15.88■□□□□ 0.13
RHBDD1-201ENST00000341329 RAPGEF2Q9Y4G8 1499 aa15.85■□□□□ 0.13
RHBDD1-201ENST00000341329 KNSTRNQ9Y448 316 aa15.85■□□□□ 0.13
RHBDD1-201ENST00000341329 EIF5BO60841 1220 aaKnown RBP15.84■□□□□ 0.13
RHBDD1-201ENST00000341329 STAG3Q9UJ98 1225 aa15.83■□□□□ 0.12
RHBDD1-201ENST00000341329 ESF1Q9H501 851 aaKnown RBP15.83■□□□□ 0.12
RHBDD1-201ENST00000341329 PPP1R15AO75807 674 aaPredicted RBP15.83■□□□□ 0.12
RHBDD1-201ENST00000341329 ATAD2BQ9ULI0 1458 aa15.82■□□□□ 0.12
RHBDD1-201ENST00000341329 DHX57Q6P158 1386 aaKnown RBP15.81■□□□□ 0.12
RHBDD1-201ENST00000341329 GLIPR1L2Q4G1C9 344 aa15.8■□□□□ 0.12
RHBDD1-201ENST00000341329 CFAP53Q96M91 514 aa15.8■□□□□ 0.12
RHBDD1-201ENST00000341329 NOP58Q9Y2X3 529 aaKnown RBP15.79■□□□□ 0.12
RHBDD1-201ENST00000341329 HSPA5P11021 654 aaKnown RBP15.78■□□□□ 0.12
RHBDD1-201ENST00000341329 MYH16Q9H6N6 1097 aa15.77■□□□□ 0.12
RHBDD1-201ENST00000341329 EIF4G1Q04637 1599 aaKnown RBP15.75■□□□□ 0.11
RHBDD1-201ENST00000341329 PDS5BQ9NTI5 1447 aa15.75■□□□□ 0.11
RHBDD1-201ENST00000341329 CADPSQ9ULU8 1353 aa15.74■□□□□ 0.11
RHBDD1-201ENST00000341329 RGL3Q3MIN7 710 aa15.74■□□□□ 0.11
RHBDD1-201ENST00000341329 RBM19Q9Y4C8 960 aaKnown RBP15.74■□□□□ 0.11
RHBDD1-201ENST00000341329 TMF1P82094 1093 aa15.73■□□□□ 0.11
RHBDD1-201ENST00000341329 MS4A1P11836 297 aa15.72■□□□□ 0.11
RHBDD1-201ENST00000341329 MPHOSPH9Q99550 1183 aa15.71■□□□□ 0.11
RHBDD1-201ENST00000341329 BCL11AQ9H165 835 aa15.71■□□□□ 0.1
RHBDD1-201ENST00000341329 RALBP1Q15311 655 aa15.7■□□□□ 0.1
RHBDD1-201ENST00000341329 RUSC2Q8N2Y8 1516 aa15.7■□□□□ 0.1
RHBDD1-201ENST00000341329 CHMP4BQ9H444 224 aaKnown RBP15.7■□□□□ 0.1
RHBDD1-201ENST00000341329 ROCK2O75116 1388 aaKnown RBP15.69■□□□□ 0.1
RHBDD1-201ENST00000341329 CARMIL2Q6F5E8 1435 aa15.69■□□□□ 0.1
RHBDD1-201ENST00000341329 B4GALNT3Q6L9W6 998 aa15.67■□□□□ 0.1
RHBDD1-201ENST00000341329 KIF21BO75037 1637 aa15.67■□□□□ 0.1
RHBDD1-201ENST00000341329 GOLGA6L22H0YM25 854 aa15.67■□□□□ 0.1
RHBDD1-201ENST00000341329 ANKRD30AQ9BXX3 1397 aa15.67■□□□□ 0.1
RHBDD1-201ENST00000341329 ARID4BQ4LE39 1312 aaPredicted RBP15.67■□□□□ 0.1
RHBDD1-201ENST00000341329 KTN1Q86UP2 1357 aaKnown RBP15.66■□□□□ 0.1
RHBDD1-201ENST00000341329 DCAF11Q8TEB1 546 aa15.66■□□□□ 0.1
RHBDD1-201ENST00000341329 KCNH8Q96L42 1107 aa15.66■□□□□ 0.1
RHBDD1-201ENST00000341329 CCDC18Q5T9S5 1454 aa15.65■□□□□ 0.1
RHBDD1-201ENST00000341329 TSHZ2Q9NRE2 1034 aa15.65■□□□□ 0.1
RHBDD1-201ENST00000341329 NUDCQ9Y266 331 aa15.65■□□□□ 0.1
RHBDD1-201ENST00000341329 KANK1Q14678 1352 aa15.63■□□□□ 0.09
RHBDD1-201ENST00000341329 PKD2Q13563 968 aa15.63■□□□□ 0.09
RHBDD1-201ENST00000341329 PNNQ9H307 717 aaKnown RBP15.63■□□□□ 0.09
RHBDD1-201ENST00000341329 FHOD3Q2V2M9 1422 aa15.62■□□□□ 0.09
RHBDD1-201ENST00000341329 TCERG1O14776 1098 aaKnown RBP15.61■□□□□ 0.09
RHBDD1-201ENST00000341329 PDE3BQ13370 1112 aa15.61■□□□□ 0.09
RHBDD1-201ENST00000341329 FTSJ3Q8IY81 847 aaKnown RBP15.61■□□□□ 0.09
RHBDD1-201ENST00000341329 ERICH3Q5RHP9 1530 aa15.61■□□□□ 0.09
RHBDD1-201ENST00000341329 ERCC6Q03468 1493 aa15.61■□□□□ 0.09
RHBDD1-201ENST00000341329 RSPH4AQ5TD94 716 aa15.61■□□□□ 0.09
RHBDD1-201ENST00000341329 MAPK8IP3Q9UPT6 1336 aa15.59■□□□□ 0.09
RHBDD1-201ENST00000341329 TRIM44Q96DX7 344 aaPredicted RBP15.59■□□□□ 0.09
RHBDD1-201ENST00000341329 PHLDB1Q86UU1 1377 aa15.57■□□□□ 0.08
RHBDD1-201ENST00000341329 CC2D1BQ5T0F9 858 aaKnown RBP15.57■□□□□ 0.08
RHBDD1-201ENST00000341329 CASC1Q6TDU7 716 aa15.57■□□□□ 0.08
RHBDD1-201ENST00000341329 L3MBTL2Q969R5 705 aa15.57■□□□□ 0.08
RHBDD1-201ENST00000341329 TDRD9Q8NDG6 1382 aaKnown RBP15.56■□□□□ 0.08
RHBDD1-201ENST00000341329 RCAN3Q9UKA8 241 aa15.56■□□□□ 0.08
RHBDD1-201ENST00000341329 NUP155O75694 1391 aa15.55■□□□□ 0.08
RHBDD1-201ENST00000341329 NCLP19338 710 aaKnown RBP15.55■□□□□ 0.08
RHBDD1-201ENST00000341329 CFAP44Q96MT7 982 aa15.55■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms