RNA–Protein interactions for RNA: ENST00000341162.8

FCF1-201, Transcript of FCF1, rRNA-processing protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FCF1, Length 4,341 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FCF1-201ENST00000341162 IFT140Q96RY7 1462 aa10.92□□□□□ -0.66
FCF1-201ENST00000341162 CASKIN1Q8WXD9 1431 aa10.91□□□□□ -0.66
FCF1-201ENST00000341162 GAPVD1Q14C86 1478 aa10.89□□□□□ -0.67
FCF1-201ENST00000341162 PCF11O94913 1555 aaKnown RBP10.89□□□□□ -0.67
FCF1-201ENST00000341162 NESP48681 1621 aa10.89□□□□□ -0.67
FCF1-201ENST00000341162 FMN1Q68DA7 1419 aa10.88□□□□□ -0.67
FCF1-201ENST00000341162 UGGT2Q9NYU1 1516 aa10.87□□□□□ -0.67
FCF1-201ENST00000341162 SNAPC4Q5SXM2 1469 aa10.86□□□□□ -0.67
FCF1-201ENST00000341162 CCDC18Q5T9S5 1454 aa10.86□□□□□ -0.67
FCF1-201ENST00000341162 LRRC9Q6ZRR7 1453 aa10.85□□□□□ -0.67
FCF1-201ENST00000341162 HECW1Q76N89 1606 aa10.84□□□□□ -0.67
FCF1-201ENST00000341162 GRIN2BQ13224 1484 aa10.84□□□□□ -0.67
FCF1-201ENST00000341162 RAD54L2Q9Y4B4 1467 aa10.84□□□□□ -0.67
FCF1-201ENST00000341162 EHBP1L1Q8N3D4 1523 aa10.83□□□□□ -0.67
FCF1-201ENST00000341162 IQGAP2Q13576 1575 aa10.83□□□□□ -0.68
FCF1-201ENST00000341162 ARHGEF11O15085 1522 aa10.83□□□□□ -0.68
FCF1-201ENST00000341162 APLP2Q06481 763 aa10.81□□□□□ -0.68
FCF1-201ENST00000341162 MAGI1Q96QZ7 1491 aaPredicted RBP10.81□□□□□ -0.68
FCF1-201ENST00000341162 SUPT6HQ7KZ85 1726 aaKnown RBP10.8□□□□□ -0.68
FCF1-201ENST00000341162 LRRIQ1Q96JM4 1722 aa10.79□□□□□ -0.68
FCF1-201ENST00000341162 ACIN1Q9UKV3 1341 aaKnown RBP10.79□□□□□ -0.68
FCF1-201ENST00000341162 EIF4G3O43432 1585 aaKnown RBP10.78□□□□□ -0.68
FCF1-201ENST00000341162 AKNAQ7Z591 1439 aa10.76□□□□□ -0.69
FCF1-201ENST00000341162 ADCY10Q96PN6 1610 aa10.76□□□□□ -0.69
FCF1-201ENST00000341162 CCNB3Q8WWL7 1395 aa10.76□□□□□ -0.69
FCF1-201ENST00000341162 TCOF1Q13428 1488 aaKnown RBP10.75□□□□□ -0.69
FCF1-201ENST00000341162 KIAA0556O60303 1618 aa10.74□□□□□ -0.69
FCF1-201ENST00000341162 GCC2Q8IWJ2 1684 aa10.74□□□□□ -0.69
FCF1-201ENST00000341162 KIAA0586Q9BVV6 1533 aa10.74□□□□□ -0.69
FCF1-201ENST00000341162 GRIN2AQ12879 1464 aa10.69□□□□□ -0.7
FCF1-201ENST00000341162 SYNJ2O15056 1496 aa10.69□□□□□ -0.7
FCF1-201ENST00000341162 ITSN2Q9NZM3 1697 aa10.69□□□□□ -0.7
FCF1-201ENST00000341162 MIA2Q96PC5 1412 aa10.68□□□□□ -0.7
FCF1-201ENST00000341162 RAPGEF6Q8TEU7 1601 aa10.67□□□□□ -0.7
FCF1-201ENST00000341162 NUP160Q12769 1436 aa10.67□□□□□ -0.7
FCF1-201ENST00000341162 CCER1Q8TC90 406 aaPredicted RBP10.65□□□□□ -0.7
FCF1-201ENST00000341162 DHX57Q6P158 1386 aaKnown RBP10.65□□□□□ -0.7
FCF1-201ENST00000341162 FHOD3Q2V2M9 1422 aa10.65□□□□□ -0.7
FCF1-201ENST00000341162 TIMELESSQ9UNS1 1208 aa10.65□□□□□ -0.7
FCF1-201ENST00000341162 PTPN23Q9H3S7 1636 aa10.64□□□□□ -0.71
FCF1-201ENST00000341162 FGD6Q6ZV73 1430 aa10.64□□□□□ -0.71
FCF1-201ENST00000341162 MYOM3Q5VTT5 1437 aa10.64□□□□□ -0.71
FCF1-201ENST00000341162 SHROOM2Q13796 1616 aa10.64□□□□□ -0.71
FCF1-201ENST00000341162 DISP1Q96F81 1524 aa10.63□□□□□ -0.71
FCF1-201ENST00000341162 SETD5Q9C0A6 1442 aa10.62□□□□□ -0.71
FCF1-201ENST00000341162 ADGBQ8N7X0 1667 aa10.62□□□□□ -0.71
FCF1-201ENST00000341162 EPRSP07814 1512 aaKnown RBP10.62□□□□□ -0.71
FCF1-201ENST00000341162 CEP170Q5SW79 1584 aa10.62□□□□□ -0.71
FCF1-201ENST00000341162 CROCC2H7BZ55 1655 aa10.62□□□□□ -0.71
FCF1-201ENST00000341162 HFM1A2PYH4 1435 aa10.61□□□□□ -0.71
FCF1-201ENST00000341162 NCOA2Q15596 1464 aa10.61□□□□□ -0.71
FCF1-201ENST00000341162 TDRD9Q8NDG6 1382 aaKnown RBP10.61□□□□□ -0.71
FCF1-201ENST00000341162 MAPKBP1O60336 1514 aa10.61□□□□□ -0.71
FCF1-201ENST00000341162 PHLDB1Q86UU1 1377 aa10.6□□□□□ -0.71
FCF1-201ENST00000341162 DNMT1P26358 1616 aaKnown RBP10.6□□□□□ -0.71
FCF1-201ENST00000341162 KANK4Q5T7N3 995 aaPredicted RBP10.6□□□□□ -0.71
FCF1-201ENST00000341162 PPARGC1BQ86YN6 1023 aaKnown RBP10.59□□□□□ -0.71
FCF1-201ENST00000341162 EHMT2Q96KQ7 1210 aa10.59□□□□□ -0.71
FCF1-201ENST00000341162 ABCA8O94911 1581 aa10.59□□□□□ -0.71
FCF1-201ENST00000341162 ERCC6Q03468 1493 aa10.58□□□□□ -0.72
FCF1-201ENST00000341162 MAGI3Q5TCQ9 1506 aa10.57□□□□□ -0.72
FCF1-201ENST00000341162 ROCK1Q13464 1354 aa10.57□□□□□ -0.72
FCF1-201ENST00000341162 ZNF608Q9ULD9 1512 aaPredicted RBP10.56□□□□□ -0.72
FCF1-201ENST00000341162 AEBP2Q6ZN18 517 aaPredicted RBP10.56□□□□□ -0.72
FCF1-201ENST00000341162 SHANK2Q9UPX8 1470 aa10.54□□□□□ -0.72
FCF1-201ENST00000341162 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.54□□□□□ -0.72
FCF1-201ENST00000341162 UACAQ9BZF9 1416 aa10.53□□□□□ -0.72
FCF1-201ENST00000341162 CARMIL2Q6F5E8 1435 aa10.53□□□□□ -0.72
FCF1-201ENST00000341162 ADGRL2O95490 1459 aa10.53□□□□□ -0.72
FCF1-201ENST00000341162 NUP153P49790 1475 aaKnown RBP10.53□□□□□ -0.72
FCF1-201ENST00000341162 MTUS2Q5JR59 1369 aa10.52□□□□□ -0.72
FCF1-201ENST00000341162 RAB3GAP2Q9H2M9 1393 aa10.52□□□□□ -0.73
FCF1-201ENST00000341162 ARHGEF5Q12774 1597 aa10.51□□□□□ -0.73
FCF1-201ENST00000341162 ZNF316A6NFI3 1004 aaPredicted RBP10.51□□□□□ -0.73
FCF1-201ENST00000341162 KIF14Q15058 1648 aa10.5□□□□□ -0.73
FCF1-201ENST00000341162 MAST1Q9Y2H9 1570 aa10.49□□□□□ -0.73
FCF1-201ENST00000341162 TROQ12816 1431 aaPredicted RBP10.49□□□□□ -0.73
FCF1-201ENST00000341162 KDM5DQ9BY66 1539 aa10.49□□□□□ -0.73
FCF1-201ENST00000341162 CHD1O14646 1710 aa10.48□□□□□ -0.73
FCF1-201ENST00000341162 NAIPQ13075 1403 aa10.47□□□□□ -0.73
FCF1-201ENST00000341162 POLR1AO95602 1720 aaPredicted RBP10.46□□□□□ -0.73
FCF1-201ENST00000341162 CDC42BPAQ5VT25 1732 aa10.46□□□□□ -0.73
FCF1-201ENST00000341162 CLASP1Q7Z460 1538 aa10.46□□□□□ -0.73
FCF1-201ENST00000341162 PREX2Q70Z35 1606 aa10.46□□□□□ -0.74
FCF1-201ENST00000341162 ARAP3Q8WWN8 1544 aa10.46□□□□□ -0.74
FCF1-201ENST00000341162 UHRF1BP1LA0JNW5 1464 aa10.45□□□□□ -0.74
FCF1-201ENST00000341162 CDK13Q14004 1512 aaKnown RBP10.44□□□□□ -0.74
FCF1-201ENST00000341162 ABCC10Q5T3U5 1492 aa10.44□□□□□ -0.74
FCF1-201ENST00000341162 HNRNPUL2Q1KMD3 747 aaKnown RBP10.43□□□□□ -0.74
FCF1-201ENST00000341162 DAPK1P53355 1430 aa10.42□□□□□ -0.74
FCF1-201ENST00000341162 CDK11AQ9UQ88 783 aaPredicted RBP10.41□□□□□ -0.74
FCF1-201ENST00000341162 DNAJC5BQ9UF47 199 aa10.41□□□□□ -0.74
FCF1-201ENST00000341162 PLXNC1O60486 1568 aa10.41□□□□□ -0.74
FCF1-201ENST00000341162 PTPRKQ15262 1439 aa10.4□□□□□ -0.74
FCF1-201ENST00000341162 KDM5BQ9UGL1 1544 aa10.39□□□□□ -0.75
FCF1-201ENST00000341162 CAMSAP2Q08AD1 1489 aa10.39□□□□□ -0.75
FCF1-201ENST00000341162 DIEXFQ68CQ4 756 aaKnown RBP10.39□□□□□ -0.75
FCF1-201ENST00000341162 ABCC2Q92887 1545 aa10.39□□□□□ -0.75
FCF1-201ENST00000341162 PLEKHH2Q8IVE3 1493 aa10.38□□□□□ -0.75
FCF1-201ENST00000341162 GPATCH8Q9UKJ3 1502 aaKnown RBP10.38□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms