RNA–Protein interactions for RNA: ENST00000341071.11

BSDC1-201, Transcript of BSD domain containing 1, humanhuman

TSL 2 BASIC

Gene BSDC1, Length 4,599 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BSDC1-201ENST00000341071 CANXP27824 592 aaKnown RBP17.6■□□□□ 0.41
BSDC1-201ENST00000341071 TMC1Q8TDI8 760 aa17.6■□□□□ 0.41
BSDC1-201ENST00000341071 KDM2AQ9Y2K7 1162 aa17.59■□□□□ 0.41
BSDC1-201ENST00000341071 SIN3AQ96ST3 1273 aa17.58■□□□□ 0.4
BSDC1-201ENST00000341071 FHAD1B1AJZ9 1412 aa17.58■□□□□ 0.4
BSDC1-201ENST00000341071 SMARCA2P51531 1590 aa17.57■□□□□ 0.4
BSDC1-201ENST00000341071 ANP32AP39687 249 aaKnown RBP17.57■□□□□ 0.4
BSDC1-201ENST00000341071 CHGAP10645 457 aaKnown RBP17.55■□□□□ 0.4
BSDC1-201ENST00000341071 SALL2Q9Y467 1007 aaPredicted RBP17.54■□□□□ 0.4
BSDC1-201ENST00000341071 PLEKHD1A6NEE1 506 aa17.53■□□□□ 0.4
BSDC1-201ENST00000341071 KANK4Q5T7N3 995 aaPredicted RBP17.53■□□□□ 0.4
BSDC1-201ENST00000341071 NEFMP07197 916 aa17.5■□□□□ 0.39
BSDC1-201ENST00000341071 CFDP1Q9UEE9 299 aaPredicted RBP17.5■□□□□ 0.39
BSDC1-201ENST00000341071 NPM1P06748 294 aaKnown RBP eCLIP17.48■□□□□ 0.39
BSDC1-201ENST00000341071 IRX6P78412 446 aaPredicted RBP17.47■□□□□ 0.39
BSDC1-201ENST00000341071 NPM2Q86SE8 214 aaKnown RBP17.47■□□□□ 0.39
BSDC1-201ENST00000341071 CCDC136Q96JN2 1154 aa17.47■□□□□ 0.39
BSDC1-201ENST00000341071 ZBTB47Q9UFB7 747 aaPredicted RBP17.46■□□□□ 0.39
BSDC1-201ENST00000341071 SMARCA4P51532 1647 aa17.44■□□□□ 0.38
BSDC1-201ENST00000341071 TIMELESSQ9UNS1 1208 aa17.42■□□□□ 0.38
BSDC1-201ENST00000341071 ATAD2BQ9ULI0 1458 aa17.41■□□□□ 0.38
BSDC1-201ENST00000341071 SETD5Q9C0A6 1442 aa17.4■□□□□ 0.38
BSDC1-201ENST00000341071 KCNH8Q96L42 1107 aa17.4■□□□□ 0.38
BSDC1-201ENST00000341071 RUSC2Q8N2Y8 1516 aa17.4■□□□□ 0.38
BSDC1-201ENST00000341071 RAPGEF2Q9Y4G8 1499 aa17.39■□□□□ 0.37
BSDC1-201ENST00000341071 RGL3Q3MIN7 710 aa17.38■□□□□ 0.37
BSDC1-201ENST00000341071 WDR43Q15061 677 aaKnown RBP eCLIP17.38■□□□□ 0.37
BSDC1-201ENST00000341071 BCL11AQ9H165 835 aa17.37■□□□□ 0.37
BSDC1-201ENST00000341071 STAG3Q9UJ98 1225 aa17.37■□□□□ 0.37
BSDC1-201ENST00000341071 ARHGAP35Q9NRY4 1499 aa17.35■□□□□ 0.37
BSDC1-201ENST00000341071 RAB3GAP2Q9H2M9 1393 aa17.34■□□□□ 0.37
BSDC1-201ENST00000341071 ESF1Q9H501 851 aaKnown RBP17.34■□□□□ 0.37
BSDC1-201ENST00000341071 EIF4G1Q04637 1599 aaKnown RBP17.33■□□□□ 0.37
BSDC1-201ENST00000341071 CARD11Q9BXL7 1154 aa17.33■□□□□ 0.36
BSDC1-201ENST00000341071 SUPT16HQ9Y5B9 1047 aaKnown RBP17.32■□□□□ 0.36
BSDC1-201ENST00000341071 GOLGA6L2Q8N9W4 650 aaPredicted RBP17.31■□□□□ 0.36
BSDC1-201ENST00000341071 CADPSQ9ULU8 1353 aa17.31■□□□□ 0.36
BSDC1-201ENST00000341071 TDRD9Q8NDG6 1382 aaKnown RBP17.3■□□□□ 0.36
BSDC1-201ENST00000341071 SLC24A1O60721 1099 aa17.3■□□□□ 0.36
BSDC1-201ENST00000341071 FMN1Q68DA7 1419 aa17.28■□□□□ 0.36
BSDC1-201ENST00000341071 ERCC6Q03468 1493 aa17.27■□□□□ 0.35
BSDC1-201ENST00000341071 SENP3-EIF4A1A0A087X0R7 540 aa17.26■□□□□ 0.35
BSDC1-201ENST00000341071 PDS5BQ9NTI5 1447 aa17.24■□□□□ 0.35
BSDC1-201ENST00000341071 CCER2I3L3R5 266 aa17.23■□□□□ 0.35
BSDC1-201ENST00000341071 FHOD3Q2V2M9 1422 aa17.21■□□□□ 0.35
BSDC1-201ENST00000341071 UPF2Q9HAU5 1272 aaKnown RBP17.21■□□□□ 0.35
BSDC1-201ENST00000341071 HSPA5P11021 654 aaKnown RBP17.19■□□□□ 0.34
BSDC1-201ENST00000341071 PPP1R15AO75807 674 aaPredicted RBP17.18■□□□□ 0.34
BSDC1-201ENST00000341071 CDCA8Q53HL2 280 aa17.18■□□□□ 0.34
BSDC1-201ENST00000341071 KNSTRNQ9Y448 316 aa17.18■□□□□ 0.34
BSDC1-201ENST00000341071 DHX57Q6P158 1386 aaKnown RBP17.17■□□□□ 0.34
BSDC1-201ENST00000341071 NBR1Q14596 966 aa17.16■□□□□ 0.34
BSDC1-201ENST00000341071 FOXD1Q16676 465 aa17.16■□□□□ 0.34
BSDC1-201ENST00000341071 DCAF11Q8TEB1 546 aa17.15■□□□□ 0.34
BSDC1-201ENST00000341071 PPP4R2Q9NY27 417 aa17.14■□□□□ 0.33
BSDC1-201ENST00000341071 MPHOSPH9Q99550 1183 aa17.14■□□□□ 0.33
BSDC1-201ENST00000341071 PKD2Q13563 968 aa17.12■□□□□ 0.33
BSDC1-201ENST00000341071 SENP3Q9H4L4 574 aaPredicted RBP17.1■□□□□ 0.33
BSDC1-201ENST00000341071 PLPPR3Q6T4P5 718 aa17.09■□□□□ 0.33
BSDC1-201ENST00000341071 HSP90AA1P07900 732 aaKnown RBP17.09■□□□□ 0.33
BSDC1-201ENST00000341071 CARMIL2Q6F5E8 1435 aa17.08■□□□□ 0.33
BSDC1-201ENST00000341071 FANCD2Q9BXW9 1451 aa17.06■□□□□ 0.32
BSDC1-201ENST00000341071 CC2D1BQ5T0F9 858 aaKnown RBP17.05■□□□□ 0.32
BSDC1-201ENST00000341071 IGF1RP08069 1367 aa17.05■□□□□ 0.32
BSDC1-201ENST00000341071 B4GALNT3Q6L9W6 998 aa17.04■□□□□ 0.32
BSDC1-201ENST00000341071 L3MBTL2Q969R5 705 aa17.04■□□□□ 0.32
BSDC1-201ENST00000341071 CFAP53Q96M91 514 aa17.04■□□□□ 0.32
BSDC1-201ENST00000341071 TMF1P82094 1093 aa17.03■□□□□ 0.32
BSDC1-201ENST00000341071 ANP32EQ9BTT0 268 aa17.03■□□□□ 0.32
BSDC1-201ENST00000341071 NUP155O75694 1391 aa17.01■□□□□ 0.31
BSDC1-201ENST00000341071 ANKRD30AQ9BXX3 1397 aa17.01■□□□□ 0.31
BSDC1-201ENST00000341071 FGD5Q6ZNL6 1462 aa16.99■□□□□ 0.31
BSDC1-201ENST00000341071 KIF21BO75037 1637 aa16.98■□□□□ 0.31
BSDC1-201ENST00000341071 NCAPD3P42695 1498 aa16.98■□□□□ 0.31
BSDC1-201ENST00000341071 NEUROD2Q15784 382 aa16.97■□□□□ 0.31
BSDC1-201ENST00000341071 CCDC18Q5T9S5 1454 aa16.97■□□□□ 0.31
BSDC1-201ENST00000341071 DDRGK1Q96HY6 314 aa16.96■□□□□ 0.31
BSDC1-201ENST00000341071 KANK1Q14678 1352 aa16.93■□□□□ 0.3
BSDC1-201ENST00000341071 MYH16Q9H6N6 1097 aa16.92■□□□□ 0.3
BSDC1-201ENST00000341071 TNNT2P45379 298 aaPredicted RBP16.92■□□□□ 0.3
BSDC1-201ENST00000341071 JPH4Q96JJ6 628 aa16.91■□□□□ 0.3
BSDC1-201ENST00000341071 ANP32BQ92688 251 aaKnown RBP16.91■□□□□ 0.3
BSDC1-201ENST00000341071 SYNJ1O43426 1573 aa16.91■□□□□ 0.3
BSDC1-201ENST00000341071 EFCAB2Q5VUJ9 269 aa16.9■□□□□ 0.3
BSDC1-201ENST00000341071 ROCK2O75116 1388 aaKnown RBP16.9■□□□□ 0.3
BSDC1-201ENST00000341071 PPM1GO15355 546 aaPredicted RBP16.9■□□□□ 0.3
BSDC1-201ENST00000341071 ERICH6BQ5W0A0 696 aa16.9■□□□□ 0.3
BSDC1-201ENST00000341071 RBM19Q9Y4C8 960 aaKnown RBP16.9■□□□□ 0.3
BSDC1-201ENST00000341071 KTN1Q86UP2 1357 aaKnown RBP16.9■□□□□ 0.3
BSDC1-201ENST00000341071 RAD54L2Q9Y4B4 1467 aa16.89■□□□□ 0.29
BSDC1-201ENST00000341071 HNRNPMP52272 730 aaKnown RBP eCLIP16.89■□□□□ 0.29
BSDC1-201ENST00000341071 NUDCQ9Y266 331 aa16.89■□□□□ 0.29
BSDC1-201ENST00000341071 POGKQ9P215 609 aa16.88■□□□□ 0.29
BSDC1-201ENST00000341071 BECN1Q14457 450 aa16.88■□□□□ 0.29
BSDC1-201ENST00000341071 MAPK8IP3Q9UPT6 1336 aa16.87■□□□□ 0.29
BSDC1-201ENST00000341071 RGS3P49796 1198 aa16.87■□□□□ 0.29
BSDC1-201ENST00000341071 PHLDB1Q86UU1 1377 aa16.87■□□□□ 0.29
BSDC1-201ENST00000341071 RALBP1Q15311 655 aa16.87■□□□□ 0.29
BSDC1-201ENST00000341071 FTSJ3Q8IY81 847 aaKnown RBP16.87■□□□□ 0.29
BSDC1-201ENST00000341071 FRAT1Q92837 279 aaPredicted RBP16.86■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms