RNA–Protein interactions for RNA: ENST00000339486.7

RIOK3-201, Transcript of RIO kinase 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene RIOK3, Length 4,038 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIOK3-201ENST00000339486 MYT1LQ9UL68 1186 aa17.04■□□□□ 0.32
RIOK3-201ENST00000339486 RAB3GAP2Q9H2M9 1393 aa17.03■□□□□ 0.32
RIOK3-201ENST00000339486 CCER2I3L3R5 266 aa17.02■□□□□ 0.32
RIOK3-201ENST00000339486 CCDC136Q96JN2 1154 aa17.02■□□□□ 0.31
RIOK3-201ENST00000339486 KIF27Q86VH2 1401 aa17■□□□□ 0.31
RIOK3-201ENST00000339486 BAZ1BQ9UIG0 1483 aaKnown RBP16.98■□□□□ 0.31
RIOK3-201ENST00000339486 EIF4G2P78344 907 aaKnown RBP eCLIP16.98■□□□□ 0.31
RIOK3-201ENST00000339486 SETD5Q9C0A6 1442 aa16.97■□□□□ 0.31
RIOK3-201ENST00000339486 SENP3-EIF4A1A0A087X0R7 540 aa16.96■□□□□ 0.31
RIOK3-201ENST00000339486 B4GALNT3Q6L9W6 998 aa16.96■□□□□ 0.31
RIOK3-201ENST00000339486 ZBTB47Q9UFB7 747 aaPredicted RBP16.96■□□□□ 0.31
RIOK3-201ENST00000339486 RRP7BPQ9NSQ0 103 aa16.95■□□□□ 0.3
RIOK3-201ENST00000339486 PPP4R2Q9NY27 417 aa16.95■□□□□ 0.3
RIOK3-201ENST00000339486 MTUS2Q5JR59 1369 aa16.95■□□□□ 0.3
RIOK3-201ENST00000339486 TIMELESSQ9UNS1 1208 aa16.94■□□□□ 0.3
RIOK3-201ENST00000339486 SALL2Q9Y467 1007 aaPredicted RBP16.92■□□□□ 0.3
RIOK3-201ENST00000339486 PPP1R15AO75807 674 aaPredicted RBP16.92■□□□□ 0.3
RIOK3-201ENST00000339486 SMARCA2P51531 1590 aa16.9■□□□□ 0.3
RIOK3-201ENST00000339486 TMC1Q8TDI8 760 aa16.86■□□□□ 0.29
RIOK3-201ENST00000339486 SMARCA4P51532 1647 aa16.86■□□□□ 0.29
RIOK3-201ENST00000339486 DEKP35659 375 aaKnown RBP16.84■□□□□ 0.29
RIOK3-201ENST00000339486 NOP58Q9Y2X3 529 aaKnown RBP16.83■□□□□ 0.29
RIOK3-201ENST00000339486 KIF21BO75037 1637 aa16.81■□□□□ 0.28
RIOK3-201ENST00000339486 ZNF777Q9ULD5 760 aaPredicted RBP16.8■□□□□ 0.28
RIOK3-201ENST00000339486 HSPA5P11021 654 aaKnown RBP16.79■□□□□ 0.28
RIOK3-201ENST00000339486 CARMIL1Q5VZK9 1371 aa16.78■□□□□ 0.28
RIOK3-201ENST00000339486 FHAD1B1AJZ9 1412 aa16.75■□□□□ 0.27
RIOK3-201ENST00000339486 CUX2O14529 1486 aa16.75■□□□□ 0.27
RIOK3-201ENST00000339486 SLC4A1APQ9BWU0 796 aaKnown RBP16.75■□□□□ 0.27
RIOK3-201ENST00000339486 EIF5BO60841 1220 aaKnown RBP16.74■□□□□ 0.27
RIOK3-201ENST00000339486 ERICH6BQ5W0A0 696 aa16.72■□□□□ 0.27
RIOK3-201ENST00000339486 RTN4Q9NQC3 1192 aaKnown RBP16.7■□□□□ 0.26
RIOK3-201ENST00000339486 KDM2AQ9Y2K7 1162 aa16.69■□□□□ 0.26
RIOK3-201ENST00000339486 LAS1LQ9Y4W2 734 aaKnown RBP16.69■□□□□ 0.26
RIOK3-201ENST00000339486 FANCIQ9NVI1 1328 aa16.69■□□□□ 0.26
RIOK3-201ENST00000339486 ARHGAP35Q9NRY4 1499 aa16.68■□□□□ 0.26
RIOK3-201ENST00000339486 FOXD1Q16676 465 aa16.67■□□□□ 0.26
RIOK3-201ENST00000339486 SYNJ1O43426 1573 aa16.66■□□□□ 0.26
RIOK3-201ENST00000339486 ARAP1Q96P48 1450 aa16.65■□□□□ 0.26
RIOK3-201ENST00000339486 RRBP1Q9P2E9 1410 aaKnown RBP16.65■□□□□ 0.26
RIOK3-201ENST00000339486 ATAD2BQ9ULI0 1458 aa16.65■□□□□ 0.26
RIOK3-201ENST00000339486 NEFMP07197 916 aa16.63■□□□□ 0.25
RIOK3-201ENST00000339486 PHLDB1Q86UU1 1377 aa16.6■□□□□ 0.25
RIOK3-201ENST00000339486 L3MBTL2Q969R5 705 aa16.59■□□□□ 0.25
RIOK3-201ENST00000339486 FBLN2P98095 1184 aa16.58■□□□□ 0.25
RIOK3-201ENST00000339486 FHOD3Q2V2M9 1422 aa16.58■□□□□ 0.24
RIOK3-201ENST00000339486 CANXP27824 592 aaKnown RBP16.57■□□□□ 0.24
RIOK3-201ENST00000339486 MSH5O43196 834 aa16.56■□□□□ 0.24
RIOK3-201ENST00000339486 PRKRIP1Q9H875 184 aaPredicted RBP16.56■□□□□ 0.24
RIOK3-201ENST00000339486 MPHOSPH9Q99550 1183 aa16.55■□□□□ 0.24
RIOK3-201ENST00000339486 IPO9Q96P70 1041 aaKnown RBP16.54■□□□□ 0.24
RIOK3-201ENST00000339486 CARD11Q9BXL7 1154 aa16.54■□□□□ 0.24
RIOK3-201ENST00000339486 PPM1GO15355 546 aaPredicted RBP16.53■□□□□ 0.24
RIOK3-201ENST00000339486 WDR97A6NE52 1622 aa16.52■□□□□ 0.24
RIOK3-201ENST00000339486 NUDCQ9Y266 331 aa16.51■□□□□ 0.23
RIOK3-201ENST00000339486 FMN1Q68DA7 1419 aa16.51■□□□□ 0.23
RIOK3-201ENST00000339486 DDRGK1Q96HY6 314 aa16.51■□□□□ 0.23
RIOK3-201ENST00000339486 PRXQ9BXM0 1461 aa16.5■□□□□ 0.23
RIOK3-201ENST00000339486 ZBED9Q6R2W3 1325 aa16.49■□□□□ 0.23
RIOK3-201ENST00000339486 IGF1RP08069 1367 aa16.49■□□□□ 0.23
RIOK3-201ENST00000339486 ARXQ96QS3 562 aa16.48■□□□□ 0.23
RIOK3-201ENST00000339486 CCDC18Q5T9S5 1454 aa16.48■□□□□ 0.23
RIOK3-201ENST00000339486 WASHC2AQ641Q2 1341 aa16.48■□□□□ 0.23
RIOK3-201ENST00000339486 LRRC9Q6ZRR7 1453 aa16.47■□□□□ 0.23
RIOK3-201ENST00000339486 ERICH3Q5RHP9 1530 aa16.46■□□□□ 0.23
RIOK3-201ENST00000339486 RGL3Q3MIN7 710 aa16.46■□□□□ 0.22
RIOK3-201ENST00000339486 EIF4G1Q04637 1599 aaKnown RBP16.45■□□□□ 0.22
RIOK3-201ENST00000339486 TSPY4P0CV99 314 aa16.45■□□□□ 0.22
RIOK3-201ENST00000339486 TSPY10P0CW01 314 aa16.45■□□□□ 0.22
RIOK3-201ENST00000339486 WDR43Q15061 677 aaKnown RBP eCLIP16.45■□□□□ 0.22
RIOK3-201ENST00000339486 GOLGA6L2Q8N9W4 650 aaPredicted RBP16.45■□□□□ 0.22
RIOK3-201ENST00000339486 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.45■□□□□ 0.224e-7■□□□□ 11.2
RIOK3-201ENST00000339486 CCDC184Q52MB2 194 aa16.44■□□□□ 0.22
RIOK3-201ENST00000339486 CFDP1Q9UEE9 299 aaPredicted RBP16.44■□□□□ 0.22
RIOK3-201ENST00000339486 RCAN3Q9UKA8 241 aa16.42■□□□□ 0.22
RIOK3-201ENST00000339486 PAK3O75914 559 aaPredicted RBP16.41■□□□□ 0.22
RIOK3-201ENST00000339486 RGS3P49796 1198 aa16.41■□□□□ 0.22
RIOK3-201ENST00000339486 TCERG1O14776 1098 aaKnown RBP16.4■□□□□ 0.22
RIOK3-201ENST00000339486 CC2D1BQ5T0F9 858 aaKnown RBP16.39■□□□□ 0.21
RIOK3-201ENST00000339486 UACAQ9BZF9 1416 aa16.38■□□□□ 0.21
RIOK3-201ENST00000339486 UPF2Q9HAU5 1272 aaKnown RBP16.38■□□□□ 0.21
RIOK3-201ENST00000339486 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.38■□□□□ 0.21
RIOK3-201ENST00000339486 FGD6Q6ZV73 1430 aa16.37■□□□□ 0.21
RIOK3-201ENST00000339486 PKD2Q13563 968 aa16.36■□□□□ 0.21
RIOK3-201ENST00000339486 DCAF11Q8TEB1 546 aa16.36■□□□□ 0.21
RIOK3-201ENST00000339486 CCDC7Q96M83 1385 aa16.36■□□□□ 0.21
RIOK3-201ENST00000339486 EXOC6Q8TAG9 804 aa16.34■□□□□ 0.21
RIOK3-201ENST00000339486 TOP2BQ02880 1626 aa16.34■□□□□ 0.21
RIOK3-201ENST00000339486 TDRD9Q8NDG6 1382 aaKnown RBP16.34■□□□□ 0.21
RIOK3-201ENST00000339486 CNTLNQ9NXG0 1405 aa16.34■□□□□ 0.21
RIOK3-201ENST00000339486 KIF7Q2M1P5 1343 aa16.33■□□□□ 0.21
RIOK3-201ENST00000339486 PDE4AP27815 886 aa16.33■□□□□ 0.2
RIOK3-201ENST00000339486 CADPSQ9ULU8 1353 aa16.31■□□□□ 0.2
RIOK3-201ENST00000339486 TIAM1Q13009 1591 aa16.29■□□□□ 0.2
RIOK3-201ENST00000339486 MAPKBP1O60336 1514 aa16.29■□□□□ 0.2
RIOK3-201ENST00000339486 RRP1P56182 461 aaKnown RBP16.28■□□□□ 0.2
RIOK3-201ENST00000339486 BECN1Q14457 450 aa16.27■□□□□ 0.2
RIOK3-201ENST00000339486 RALBP1Q15311 655 aa16.27■□□□□ 0.2
RIOK3-201ENST00000339486 PLIN1O60240 522 aa16.27■□□□□ 0.2
RIOK3-201ENST00000339486 KNSTRNQ9Y448 316 aa16.27■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms