RNA–Protein interactions for RNA: ENST00000336086.10

URGCP-201, Transcript of upregulator of cell proliferation, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene URGCP, Length 5,658 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
URGCP-201ENST00000336086 LAS1LQ9Y4W2 734 aaKnown RBP17.07■□□□□ 0.32
URGCP-201ENST00000336086 DEKP35659 375 aaKnown RBP17.05■□□□□ 0.32
URGCP-201ENST00000336086 CEP162Q5TB80 1403 aa17.05■□□□□ 0.32
URGCP-201ENST00000336086 RBM19Q9Y4C8 960 aaKnown RBP17.02■□□□□ 0.32
URGCP-201ENST00000336086 SCRIBQ14160 1630 aa17.01■□□□□ 0.31
URGCP-201ENST00000336086 NAP1L5Q96NT1 182 aaPredicted RBP17.01■□□□□ 0.31
URGCP-201ENST00000336086 TNNT2P45379 298 aaPredicted RBP16.99■□□□□ 0.31
URGCP-201ENST00000336086 GOLGA6L22H0YM25 854 aa16.98■□□□□ 0.31
URGCP-201ENST00000336086 KDM2AQ9Y2K7 1162 aa16.98■□□□□ 0.31
URGCP-201ENST00000336086 B4GALNT3Q6L9W6 998 aa16.94■□□□□ 0.3
URGCP-201ENST00000336086 GOLGA3Q08378 1498 aa16.94■□□□□ 0.3
URGCP-201ENST00000336086 SENP3-EIF4A1A0A087X0R7 540 aa16.93■□□□□ 0.3
URGCP-201ENST00000336086 MTUS2Q5JR59 1369 aa16.93■□□□□ 0.3
URGCP-201ENST00000336086 MYH16Q9H6N6 1097 aa16.92■□□□□ 0.3
URGCP-201ENST00000336086 CHGAP10645 457 aaKnown RBP16.91■□□□□ 0.3
URGCP-201ENST00000336086 NCLP19338 710 aaKnown RBP16.9■□□□□ 0.3
URGCP-201ENST00000336086 EEA1Q15075 1411 aa16.89■□□□□ 0.29
URGCP-201ENST00000336086 TSHZ2Q9NRE2 1034 aa16.89■□□□□ 0.29
URGCP-201ENST00000336086 PTMAP06454 111 aaKnown RBP16.88■□□□□ 0.29
URGCP-201ENST00000336086 RRP7BPQ9NSQ0 103 aa16.87■□□□□ 0.29
URGCP-201ENST00000336086 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.86■□□□□ 0.29
URGCP-201ENST00000336086 DNTTIP2Q5QJE6 756 aaKnown RBP16.85■□□□□ 0.29
URGCP-201ENST00000336086 TNIKQ9UKE5 1360 aa16.85■□□□□ 0.29
URGCP-201ENST00000336086 RGS3P49796 1198 aa16.83■□□□□ 0.28
URGCP-201ENST00000336086 SIN3AQ96ST3 1273 aa16.82■□□□□ 0.28
URGCP-201ENST00000336086 CCER2I3L3R5 266 aa16.82■□□□□ 0.28
URGCP-201ENST00000336086 TSPY4P0CV99 314 aa16.79■□□□□ 0.28
URGCP-201ENST00000336086 TSPY10P0CW01 314 aa16.79■□□□□ 0.28
URGCP-201ENST00000336086 L1TD1Q5T7N2 865 aaKnown RBP16.78■□□□□ 0.28
URGCP-201ENST00000336086 RSF1Q96T23 1441 aaPredicted RBP16.74■□□□□ 0.27
URGCP-201ENST00000336086 STAG3Q9UJ98 1225 aa16.73■□□□□ 0.27
URGCP-201ENST00000336086 FTSJ3Q8IY81 847 aaKnown RBP16.72■□□□□ 0.27
URGCP-201ENST00000336086 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.72■□□□□ 0.27
URGCP-201ENST00000336086 CEP164Q9UPV0 1460 aa16.71■□□□□ 0.27
URGCP-201ENST00000336086 KNSTRNQ9Y448 316 aa16.71■□□□□ 0.26
URGCP-201ENST00000336086 CARD11Q9BXL7 1154 aa16.7■□□□□ 0.26
URGCP-201ENST00000336086 CASC1Q6TDU7 716 aa16.7■□□□□ 0.26
URGCP-201ENST00000336086 HSP90AB1P08238 724 aaKnown RBP16.69■□□□□ 0.26
URGCP-201ENST00000336086 TPRNQ4KMQ1 711 aa16.67■□□□□ 0.26
URGCP-201ENST00000336086 CDK11BP21127 795 aaKnown RBP16.66■□□□□ 0.26
URGCP-201ENST00000336086 TIMELESSQ9UNS1 1208 aa16.66■□□□□ 0.26
URGCP-201ENST00000336086 MSNP26038 577 aaKnown RBP16.66■□□□□ 0.26
URGCP-201ENST00000336086 CFAP53Q96M91 514 aa16.65■□□□□ 0.26
URGCP-201ENST00000336086 FRAT1Q92837 279 aaPredicted RBP16.65■□□□□ 0.26
URGCP-201ENST00000336086 RGL3Q3MIN7 710 aa16.64■□□□□ 0.25
URGCP-201ENST00000336086 CDCA8Q53HL2 280 aa16.64■□□□□ 0.25
URGCP-201ENST00000336086 CCNB3Q8WWL7 1395 aa16.64■□□□□ 0.25
URGCP-201ENST00000336086 PLCB2Q00722 1185 aa16.63■□□□□ 0.25
URGCP-201ENST00000336086 HSCBQ8IWL3 235 aa16.63■□□□□ 0.25
URGCP-201ENST00000336086 WRNQ14191 1432 aaPredicted RBP eCLIP16.63■□□□□ 0.25
URGCP-201ENST00000336086 IPO9Q96P70 1041 aaKnown RBP16.63■□□□□ 0.25
URGCP-201ENST00000336086 ZRSR1Q15695 479 aaKnown RBP16.62■□□□□ 0.25
URGCP-201ENST00000336086 NEUROD2Q15784 382 aa16.62■□□□□ 0.25
URGCP-201ENST00000336086 RB1CC1Q8TDY2 1594 aa16.61■□□□□ 0.25
URGCP-201ENST00000336086 ARID4BQ4LE39 1312 aaPredicted RBP16.61■□□□□ 0.25
URGCP-201ENST00000336086 ESF1Q9H501 851 aaKnown RBP16.6■□□□□ 0.25
URGCP-201ENST00000336086 TCERG1O14776 1098 aaKnown RBP16.59■□□□□ 0.25
URGCP-201ENST00000336086 CC2D1BQ5T0F9 858 aaKnown RBP16.59■□□□□ 0.25
URGCP-201ENST00000336086 SPRYD3Q8NCJ5 442 aa16.59■□□□□ 0.25
URGCP-201ENST00000336086 PNNQ9H307 717 aaKnown RBP16.59■□□□□ 0.25
URGCP-201ENST00000336086 CHAF1AQ13111 956 aaPredicted RBP16.56■□□□□ 0.24
URGCP-201ENST00000336086 HSPA5P11021 654 aaKnown RBP16.55■□□□□ 0.24
URGCP-201ENST00000336086 MS4A1P11836 297 aa16.55■□□□□ 0.24
URGCP-201ENST00000336086 MAPK8IP3Q9UPT6 1336 aa16.52■□□□□ 0.24
URGCP-201ENST00000336086 SETD5Q9C0A6 1442 aa16.52■□□□□ 0.24
URGCP-201ENST00000336086 CHMP4BQ9H444 224 aaKnown RBP16.52■□□□□ 0.24
URGCP-201ENST00000336086 GOLGA6L6A8MZA4 724 aa16.51■□□□□ 0.23
URGCP-201ENST00000336086 GZF1Q9H116 711 aaPredicted RBP16.51■□□□□ 0.23
URGCP-201ENST00000336086 RCAN3Q9UKA8 241 aa16.51■□□□□ 0.23
URGCP-201ENST00000336086 KIF27Q86VH2 1401 aa16.5■□□□□ 0.23
URGCP-201ENST00000336086 SLKQ9H2G2 1235 aaPredicted RBP16.5■□□□□ 0.23
URGCP-201ENST00000336086 GOLGA6L3A6NEY3 463 aa16.48■□□□□ 0.23
URGCP-201ENST00000336086 GBP4Q96PP9 640 aa16.47■□□□□ 0.23
URGCP-201ENST00000336086 CFDP1Q9UEE9 299 aaPredicted RBP16.47■□□□□ 0.23
URGCP-201ENST00000336086 NUDCQ9Y266 331 aa16.47■□□□□ 0.23
URGCP-201ENST00000336086 PTMSP20962 102 aa16.47■□□□□ 0.23
URGCP-201ENST00000336086 USP35Q9P2H5 1018 aa16.46■□□□□ 0.23
URGCP-201ENST00000336086 VPS8Q8N3P4 1428 aa16.46■□□□□ 0.22
URGCP-201ENST00000336086 AMER1Q5JTC6 1135 aaPredicted RBP16.45■□□□□ 0.22
URGCP-201ENST00000336086 NRDCO43847 1150 aa16.45■□□□□ 0.22
URGCP-201ENST00000336086 SOGA1O94964 1423 aa16.44■□□□□ 0.22
URGCP-201ENST00000336086 ARID3AQ99856 593 aa16.44■□□□□ 0.22
URGCP-201ENST00000336086 RSPH6AQ9H0K4 717 aa16.44■□□□□ 0.22
URGCP-201ENST00000336086 PLEKHD1A6NEE1 506 aa16.43■□□□□ 0.22
URGCP-201ENST00000336086 TMF1P82094 1093 aa16.43■□□□□ 0.22
URGCP-201ENST00000336086 SENP3Q9H4L4 574 aaPredicted RBP16.43■□□□□ 0.22
URGCP-201ENST00000336086 FANCIQ9NVI1 1328 aa16.42■□□□□ 0.22
URGCP-201ENST00000336086 NACADO15069 1562 aa16.41■□□□□ 0.22
URGCP-201ENST00000336086 RAB3GAP2Q9H2M9 1393 aa16.41■□□□□ 0.22
URGCP-201ENST00000336086 GOLGA6L4A6NEF3 574 aa16.4■□□□□ 0.22
URGCP-201ENST00000336086 NPM1P06748 294 aaKnown RBP eCLIP16.4■□□□□ 0.22
URGCP-201ENST00000336086 KTN1Q86UP2 1357 aaKnown RBP16.4■□□□□ 0.22
URGCP-201ENST00000336086 ZBTB7CA1YPR0 619 aa16.4■□□□□ 0.22
URGCP-201ENST00000336086 FHAD1B1AJZ9 1412 aa16.4■□□□□ 0.22
URGCP-201ENST00000336086 PLPPR3Q6T4P5 718 aa16.4■□□□□ 0.22
URGCP-201ENST00000336086 DRC7Q8IY82 874 aa16.39■□□□□ 0.21
URGCP-201ENST00000336086 DCAF11Q8TEB1 546 aa16.39■□□□□ 0.21
URGCP-201ENST00000336086 KIAA2012Q0VF49 1180 aa16.39■□□□□ 0.21
URGCP-201ENST00000336086 HSP90AA2PQ14568 343 aaPredicted RBP16.39■□□□□ 0.21
URGCP-201ENST00000336086 KCNH8Q96L42 1107 aa16.38■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms