RNA–Protein interactions for RNA: ENST00000335793.3

CDC42EP4-201, Transcript of CDC42 effector protein 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42EP4, Length 3,272 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP4-201ENST00000335793 RRBP1Q9P2E9 1410 aaKnown RBP23.57■■□□□ 1.36
CDC42EP4-201ENST00000335793 IGF1RP08069 1367 aa23.57■■□□□ 1.36
CDC42EP4-201ENST00000335793 CFTRP13569 1480 aa23.55■■□□□ 1.36
CDC42EP4-201ENST00000335793 KCNH8Q96L42 1107 aa23.53■■□□□ 1.36
CDC42EP4-201ENST00000335793 SUPT16HQ9Y5B9 1047 aaKnown RBP23.51■■□□□ 1.35
CDC42EP4-201ENST00000335793 BCANQ96GW7 911 aa23.5■■□□□ 1.35
CDC42EP4-201ENST00000335793 HMGXB3Q12766 1538 aa23.49■■□□□ 1.35
CDC42EP4-201ENST00000335793 CADPSQ9ULU8 1353 aa23.45■■□□□ 1.34
CDC42EP4-201ENST00000335793 ERICH6Q7L0X2 663 aa23.45■■□□□ 1.34
CDC42EP4-201ENST00000335793 SETD5Q9C0A6 1442 aa23.44■■□□□ 1.34
CDC42EP4-201ENST00000335793 PHLDB1Q86UU1 1377 aa23.4■■□□□ 1.34
CDC42EP4-201ENST00000335793 NESP48681 1621 aa23.39■■□□□ 1.33
CDC42EP4-201ENST00000335793 FGD5Q6ZNL6 1462 aa23.39■■□□□ 1.33
CDC42EP4-201ENST00000335793 FHAD1B1AJZ9 1412 aa23.35■■□□□ 1.33
CDC42EP4-201ENST00000335793 FHOD3Q2V2M9 1422 aa23.34■■□□□ 1.33
CDC42EP4-201ENST00000335793 ANO8Q9HCE9 1232 aaPredicted RBP23.33■■□□□ 1.33
CDC42EP4-201ENST00000335793 LRRC9Q6ZRR7 1453 aa23.32■■□□□ 1.32
CDC42EP4-201ENST00000335793 TRIM52Q96A61 297 aa23.31■■□□□ 1.32
CDC42EP4-201ENST00000335793 ANP32CO43423 234 aa23.3■■□□□ 1.32
CDC42EP4-201ENST00000335793 FKBP8Q14318 412 aa23.3■■□□□ 1.32
CDC42EP4-201ENST00000335793 NEFLP07196 543 aa23.29■■□□□ 1.32
CDC42EP4-201ENST00000335793 TIAM1Q13009 1591 aa23.28■■□□□ 1.32
CDC42EP4-201ENST00000335793 RAD54L2Q9Y4B4 1467 aa23.25■■□□□ 1.31
CDC42EP4-201ENST00000335793 MTUS2Q5JR59 1369 aa23.25■■□□□ 1.31
CDC42EP4-201ENST00000335793 TONSLQ96HA7 1378 aa23.25■■□□□ 1.31
CDC42EP4-201ENST00000335793 ARID3CA6NKF2 412 aa23.23■■□□□ 1.31
CDC42EP4-201ENST00000335793 PPP1R15AO75807 674 aaPredicted RBP23.21■■□□□ 1.31
CDC42EP4-201ENST00000335793 FANCD2Q9BXW9 1451 aa23.21■■□□□ 1.31
CDC42EP4-201ENST00000335793 CHIC2Q9UKJ5 165 aa23.2■■□□□ 1.3
CDC42EP4-201ENST00000335793 MAPKBP1O60336 1514 aa23.2■■□□□ 1.3
CDC42EP4-201ENST00000335793 WDR97A6NE52 1622 aa23.17■■□□□ 1.3
CDC42EP4-201ENST00000335793 RRP7BPQ9NSQ0 103 aa23.14■■□□□ 1.29
CDC42EP4-201ENST00000335793 TIMELESSQ9UNS1 1208 aa23.13■■□□□ 1.29
CDC42EP4-201ENST00000335793 TDRD9Q8NDG6 1382 aaKnown RBP23.13■■□□□ 1.29
CDC42EP4-201ENST00000335793 CCDC136Q96JN2 1154 aa23.12■■□□□ 1.29
CDC42EP4-201ENST00000335793 PCF11O94913 1555 aaKnown RBP23.09■■□□□ 1.29
CDC42EP4-201ENST00000335793 MAP3K1Q13233 1512 aa23.09■■□□□ 1.29
CDC42EP4-201ENST00000335793 RBM19Q9Y4C8 960 aaKnown RBP23.07■■□□□ 1.28
CDC42EP4-201ENST00000335793 FMN1Q68DA7 1419 aa23.04■■□□□ 1.28
CDC42EP4-201ENST00000335793 POLA1P09884 1462 aaPredicted RBP23.03■■□□□ 1.28
CDC42EP4-201ENST00000335793 CASKIN1Q8WXD9 1431 aa23.02■■□□□ 1.28
CDC42EP4-201ENST00000335793 FGD6Q6ZV73 1430 aa23.01■■□□□ 1.27
CDC42EP4-201ENST00000335793 ERCC6Q03468 1493 aa23.01■■□□□ 1.27
CDC42EP4-201ENST00000335793 HNRNPUQ00839 825 aaKnown RBP eCLIP23■■□□□ 1.27
CDC42EP4-201ENST00000335793 CNGB1Q14028 1251 aaPredicted RBP23■■□□□ 1.27
CDC42EP4-201ENST00000335793 FYCO1Q9BQS8 1478 aa22.98■■□□□ 1.27
CDC42EP4-201ENST00000335793 TOPBP1Q92547 1522 aa22.98■■□□□ 1.27
CDC42EP4-201ENST00000335793 CCER2I3L3R5 266 aa22.98■■□□□ 1.27
CDC42EP4-201ENST00000335793 CCDC18Q5T9S5 1454 aa22.97■■□□□ 1.27
CDC42EP4-201ENST00000335793 IRX6P78412 446 aaPredicted RBP22.95■■□□□ 1.26
CDC42EP4-201ENST00000335793 SALL2Q9Y467 1007 aaPredicted RBP22.95■■□□□ 1.26
CDC42EP4-201ENST00000335793 ABCA10Q8WWZ4 1543 aa22.93■■□□□ 1.26
CDC42EP4-201ENST00000335793 MSH5O43196 834 aa22.93■■□□□ 1.26
CDC42EP4-201ENST00000335793 FOXD1Q16676 465 aa22.92■■□□□ 1.26
CDC42EP4-201ENST00000335793 DNMBPQ6XZF7 1577 aa22.9■■□□□ 1.26
CDC42EP4-201ENST00000335793 PRDM2Q13029 1718 aa22.89■■□□□ 1.26
CDC42EP4-201ENST00000335793 POLR3GLQ9BT43 218 aa22.89■■□□□ 1.25
CDC42EP4-201ENST00000335793 PTPRKQ15262 1439 aa22.88■■□□□ 1.25
CDC42EP4-201ENST00000335793 EFCAB5A4FU69 1503 aa22.88■■□□□ 1.25
CDC42EP4-201ENST00000335793 UACAQ9BZF9 1416 aa22.86■■□□□ 1.25
CDC42EP4-201ENST00000335793 HSPA5P11021 654 aaKnown RBP22.86■■□□□ 1.25
CDC42EP4-201ENST00000335793 PDS5BQ9NTI5 1447 aa22.86■■□□□ 1.25
CDC42EP4-201ENST00000335793 DEKP35659 375 aaKnown RBP22.85■■□□□ 1.25
CDC42EP4-201ENST00000335793 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP22.85■■□□□ 1.25
CDC42EP4-201ENST00000335793 NCOA2Q15596 1464 aa22.85■■□□□ 1.25
CDC42EP4-201ENST00000335793 EIF4G2P78344 907 aaKnown RBP eCLIP22.85■■□□□ 1.251e-6■■■■■ 34.3
CDC42EP4-201ENST00000335793 CFAP43Q8NDM7 1665 aa22.85■■□□□ 1.25
CDC42EP4-201ENST00000335793 ZBTB4Q9P1Z0 1013 aaPredicted RBP22.84■■□□□ 1.25
CDC42EP4-201ENST00000335793 MYOM3Q5VTT5 1437 aa22.83■■□□□ 1.25
CDC42EP4-201ENST00000335793 FAM9BQ8IZU0 186 aa22.83■■□□□ 1.24
CDC42EP4-201ENST00000335793 GAPVD1Q14C86 1478 aa22.82■■□□□ 1.24
CDC42EP4-201ENST00000335793 HFM1A2PYH4 1435 aa22.82■■□□□ 1.24
CDC42EP4-201ENST00000335793 RTN4Q9NQC3 1192 aaKnown RBP22.81■■□□□ 1.24
CDC42EP4-201ENST00000335793 AQRO60306 1485 aaKnown RBP eCLIP22.81■■□□□ 1.24
CDC42EP4-201ENST00000335793 NAIPQ13075 1403 aa22.8■■□□□ 1.24
CDC42EP4-201ENST00000335793 ZNF326Q5BKZ1 582 aaKnown RBP22.78■■□□□ 1.24
CDC42EP4-201ENST00000335793 MPHOSPH9Q99550 1183 aa22.78■■□□□ 1.24
CDC42EP4-201ENST00000335793 L3MBTL2Q969R5 705 aa22.76■■□□□ 1.23
CDC42EP4-201ENST00000335793 URB2Q14146 1524 aaKnown RBP22.74■■□□□ 1.23
CDC42EP4-201ENST00000335793 SNAPC4Q5SXM2 1469 aa22.73■■□□□ 1.23
CDC42EP4-201ENST00000335793 WASHC2AQ641Q2 1341 aa22.73■■□□□ 1.23
CDC42EP4-201ENST00000335793 CUL7Q14999 1698 aa22.73■■□□□ 1.23
CDC42EP4-201ENST00000335793 ZNF777Q9ULD5 760 aaPredicted RBP22.73■■□□□ 1.23
CDC42EP4-201ENST00000335793 SLC4A1APQ9BWU0 796 aaKnown RBP22.72■■□□□ 1.23
CDC42EP4-201ENST00000335793 NBR1Q14596 966 aa22.72■■□□□ 1.23
CDC42EP4-201ENST00000335793 MRS2Q9HD23 443 aa22.72■■□□□ 1.23
CDC42EP4-201ENST00000335793 LAMC3Q9Y6N6 1575 aa22.71■■□□□ 1.23
CDC42EP4-201ENST00000335793 CDK11AQ9UQ88 783 aaPredicted RBP22.69■■□□□ 1.22
CDC42EP4-201ENST00000335793 PTPN23Q9H3S7 1636 aa22.69■■□□□ 1.22
CDC42EP4-201ENST00000335793 KIF21AQ7Z4S6 1674 aa22.68■■□□□ 1.22
CDC42EP4-201ENST00000335793 CTTNBP2Q8WZ74 1663 aa22.67■■□□□ 1.22
CDC42EP4-201ENST00000335793 FBLN2P98095 1184 aa22.66■■□□□ 1.22
CDC42EP4-201ENST00000335793 CCDC184Q52MB2 194 aa22.65■■□□□ 1.22
CDC42EP4-201ENST00000335793 SENP3-EIF4A1A0A087X0R7 540 aa22.64■■□□□ 1.22
CDC42EP4-201ENST00000335793 ZNF644Q9H582 1327 aaPredicted RBP22.63■■□□□ 1.21
CDC42EP4-201ENST00000335793 GRIN2BQ13224 1484 aa22.62■■□□□ 1.21
CDC42EP4-201ENST00000335793 SUPT6HQ7KZ85 1726 aaKnown RBP22.61■■□□□ 1.21
CDC42EP4-201ENST00000335793 EHBP1L1Q8N3D4 1523 aa22.6■■□□□ 1.21
CDC42EP4-201ENST00000335793 C11orf95C9JLR9 678 aaPredicted RBP22.6■■□□□ 1.21
CDC42EP4-201ENST00000335793 PRKRIP1Q9H875 184 aaPredicted RBP22.56■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 8.7 ms