RNA–Protein interactions for RNA: ENST00000327026.7

CCDC57-201, Transcript of coiled-coil domain containing 57, humanhuman

TSL 2

Gene CCDC57, Length 5,379 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC57-201ENST00000327026 TSPY4P0CV99 314 aa20.11■□□□□ 0.81
CCDC57-201ENST00000327026 TSPY10P0CW01 314 aa20.11■□□□□ 0.81
CCDC57-201ENST00000327026 KDM2AQ9Y2K7 1162 aa20.09■□□□□ 0.81
CCDC57-201ENST00000327026 TNIKQ9UKE5 1360 aa20.09■□□□□ 0.81
CCDC57-201ENST00000327026 DDRGK1Q96HY6 314 aa20.09■□□□□ 0.81
CCDC57-201ENST00000327026 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.08■□□□□ 0.85e-7■□□□□ 9.5
CCDC57-201ENST00000327026 BAZ1AQ9NRL2 1556 aaPredicted RBP20.06■□□□□ 0.8
CCDC57-201ENST00000327026 RRP7BPQ9NSQ0 103 aa20.03■□□□□ 0.8
CCDC57-201ENST00000327026 WRNQ14191 1432 aaPredicted RBP eCLIP20.02■□□□□ 0.8
CCDC57-201ENST00000327026 STAG3Q9UJ98 1225 aa20.01■□□□□ 0.79
CCDC57-201ENST00000327026 BAZ1BQ9UIG0 1483 aaKnown RBP20■□□□□ 0.79
CCDC57-201ENST00000327026 ESF1Q9H501 851 aaKnown RBP19.99■□□□□ 0.79
CCDC57-201ENST00000327026 CEP164Q9UPV0 1460 aa19.98■□□□□ 0.79
CCDC57-201ENST00000327026 PPM1GO15355 546 aaPredicted RBP19.98■□□□□ 0.79
CCDC57-201ENST00000327026 PPP4R2Q9NY27 417 aa19.93■□□□□ 0.78
CCDC57-201ENST00000327026 NOP58Q9Y2X3 529 aaKnown RBP19.92■□□□□ 0.78
CCDC57-201ENST00000327026 NPM1P06748 294 aaKnown RBP eCLIP19.92■□□□□ 0.78
CCDC57-201ENST00000327026 KIF27Q86VH2 1401 aa19.88■□□□□ 0.77
CCDC57-201ENST00000327026 ERICH6BQ5W0A0 696 aa19.88■□□□□ 0.77
CCDC57-201ENST00000327026 ARXQ96QS3 562 aa19.87■□□□□ 0.77
CCDC57-201ENST00000327026 CHMP7Q8WUX9 453 aaPredicted RBP19.86■□□□□ 0.77
CCDC57-201ENST00000327026 BECN1Q14457 450 aa19.84■□□□□ 0.77
CCDC57-201ENST00000327026 RBM19Q9Y4C8 960 aaKnown RBP19.82■□□□□ 0.76
CCDC57-201ENST00000327026 SIN3AQ96ST3 1273 aa19.82■□□□□ 0.76
CCDC57-201ENST00000327026 MYH16Q9H6N6 1097 aa19.81■□□□□ 0.76
CCDC57-201ENST00000327026 DEKP35659 375 aaKnown RBP19.8■□□□□ 0.76
CCDC57-201ENST00000327026 PLEKHD1A6NEE1 506 aa19.79■□□□□ 0.76
CCDC57-201ENST00000327026 RGL3Q3MIN7 710 aa19.76■□□□□ 0.75
CCDC57-201ENST00000327026 CCER2I3L3R5 266 aa19.76■□□□□ 0.75
CCDC57-201ENST00000327026 CARD11Q9BXL7 1154 aa19.76■□□□□ 0.75
CCDC57-201ENST00000327026 CCNB3Q8WWL7 1395 aa19.76■□□□□ 0.75
CCDC57-201ENST00000327026 CDCA8Q53HL2 280 aa19.75■□□□□ 0.75
CCDC57-201ENST00000327026 TSHZ2Q9NRE2 1034 aa19.75■□□□□ 0.75
CCDC57-201ENST00000327026 CFDP1Q9UEE9 299 aaPredicted RBP19.74■□□□□ 0.75
CCDC57-201ENST00000327026 TIMELESSQ9UNS1 1208 aa19.73■□□□□ 0.75
CCDC57-201ENST00000327026 KNSTRNQ9Y448 316 aa19.73■□□□□ 0.75
CCDC57-201ENST00000327026 TRIM44Q96DX7 344 aaPredicted RBP19.73■□□□□ 0.75
CCDC57-201ENST00000327026 SENP3-EIF4A1A0A087X0R7 540 aa19.72■□□□□ 0.75
CCDC57-201ENST00000327026 SMARCA2P51531 1590 aa19.7■□□□□ 0.74
CCDC57-201ENST00000327026 CFAP53Q96M91 514 aa19.69■□□□□ 0.74
CCDC57-201ENST00000327026 FHAD1B1AJZ9 1412 aa19.66■□□□□ 0.74
CCDC57-201ENST00000327026 SOGA1O94964 1423 aa19.66■□□□□ 0.74
CCDC57-201ENST00000327026 GOLGA6L22H0YM25 854 aa19.66■□□□□ 0.74
CCDC57-201ENST00000327026 KCNH8Q96L42 1107 aa19.65■□□□□ 0.74
CCDC57-201ENST00000327026 TNNT2P45379 298 aaPredicted RBP19.64■□□□□ 0.73
CCDC57-201ENST00000327026 CECR2Q9BXF3 1484 aa19.63■□□□□ 0.73
CCDC57-201ENST00000327026 PLPPR3Q6T4P5 718 aa19.62■□□□□ 0.73
CCDC57-201ENST00000327026 VPS8Q8N3P4 1428 aa19.61■□□□□ 0.73
CCDC57-201ENST00000327026 B4GALNT3Q6L9W6 998 aa19.61■□□□□ 0.73
CCDC57-201ENST00000327026 RTN4Q9NQC3 1192 aaKnown RBP19.6■□□□□ 0.73
CCDC57-201ENST00000327026 NCLP19338 710 aaKnown RBP19.59■□□□□ 0.73
CCDC57-201ENST00000327026 LAS1LQ9Y4W2 734 aaKnown RBP19.59■□□□□ 0.73
CCDC57-201ENST00000327026 FTSJ3Q8IY81 847 aaKnown RBP19.58■□□□□ 0.73
CCDC57-201ENST00000327026 NAP1L5Q96NT1 182 aaPredicted RBP19.58■□□□□ 0.72
CCDC57-201ENST00000327026 SETD5Q9C0A6 1442 aa19.57■□□□□ 0.72
CCDC57-201ENST00000327026 RGS3P49796 1198 aa19.55■□□□□ 0.72
CCDC57-201ENST00000327026 L1TD1Q5T7N2 865 aaKnown RBP19.55■□□□□ 0.72
CCDC57-201ENST00000327026 CARMIL1Q5VZK9 1371 aa19.54■□□□□ 0.72
CCDC57-201ENST00000327026 NEUROD2Q15784 382 aa19.53■□□□□ 0.72
CCDC57-201ENST00000327026 PPP1R15AO75807 674 aaPredicted RBP19.53■□□□□ 0.72
CCDC57-201ENST00000327026 CC2D1BQ5T0F9 858 aaKnown RBP19.5■□□□□ 0.71
CCDC57-201ENST00000327026 TOP2AP11388 1531 aaKnown RBP19.5■□□□□ 0.71
CCDC57-201ENST00000327026 SENP3Q9H4L4 574 aaPredicted RBP19.5■□□□□ 0.71
CCDC57-201ENST00000327026 MAPK8IP3Q9UPT6 1336 aa19.5■□□□□ 0.71
CCDC57-201ENST00000327026 NUDCQ9Y266 331 aa19.49■□□□□ 0.71
CCDC57-201ENST00000327026 CASC1Q6TDU7 716 aa19.49■□□□□ 0.71
CCDC57-201ENST00000327026 FRAT1Q92837 279 aaPredicted RBP19.48■□□□□ 0.71
CCDC57-201ENST00000327026 HSPA5P11021 654 aaKnown RBP19.48■□□□□ 0.71
CCDC57-201ENST00000327026 CUX2O14529 1486 aa19.48■□□□□ 0.71
CCDC57-201ENST00000327026 TMF1P82094 1093 aa19.46■□□□□ 0.71
CCDC57-201ENST00000327026 KANK4Q5T7N3 995 aaPredicted RBP19.46■□□□□ 0.71
CCDC57-201ENST00000327026 MS4A1P11836 297 aa19.46■□□□□ 0.71
CCDC57-201ENST00000327026 DCAF11Q8TEB1 546 aa19.46■□□□□ 0.71
CCDC57-201ENST00000327026 ARHGAP35Q9NRY4 1499 aa19.45■□□□□ 0.7
CCDC57-201ENST00000327026 MROH2BQ7Z745 1585 aa19.44■□□□□ 0.7
CCDC57-201ENST00000327026 CHMP4BQ9H444 224 aaKnown RBP19.43■□□□□ 0.7
CCDC57-201ENST00000327026 ERCC6Q03468 1493 aa19.43■□□□□ 0.7
CCDC57-201ENST00000327026 PTMAP06454 111 aaKnown RBP19.43■□□□□ 0.7
CCDC57-201ENST00000327026 ABCC8Q09428 1581 aa19.42■□□□□ 0.7
CCDC57-201ENST00000327026 CCDC88BA6NC98 1476 aa19.42■□□□□ 0.7
CCDC57-201ENST00000327026 RAB3GAP2Q9H2M9 1393 aa19.41■□□□□ 0.7
CCDC57-201ENST00000327026 C14orf37Q86TY3 774 aa19.4■□□□□ 0.7
CCDC57-201ENST00000327026 IPO9Q96P70 1041 aaKnown RBP19.39■□□□□ 0.69
CCDC57-201ENST00000327026 TCERG1O14776 1098 aaKnown RBP19.38■□□□□ 0.69
CCDC57-201ENST00000327026 ZBTB7CA1YPR0 619 aa19.38■□□□□ 0.69
CCDC57-201ENST00000327026 FANCIQ9NVI1 1328 aa19.37■□□□□ 0.69
CCDC57-201ENST00000327026 PDS5BQ9NTI5 1447 aa19.36■□□□□ 0.69
CCDC57-201ENST00000327026 USP35Q9P2H5 1018 aa19.36■□□□□ 0.69
CCDC57-201ENST00000327026 POGKQ9P215 609 aa19.35■□□□□ 0.69
CCDC57-201ENST00000327026 HSP90AB1P08238 724 aaKnown RBP19.35■□□□□ 0.69
CCDC57-201ENST00000327026 U2SURPO15042 1029 aaKnown RBP19.33■□□□□ 0.69
CCDC57-201ENST00000327026 PNNQ9H307 717 aaKnown RBP19.33■□□□□ 0.69
CCDC57-201ENST00000327026 EIF4G1Q04637 1599 aaKnown RBP19.33■□□□□ 0.69
CCDC57-201ENST00000327026 DNTTIP2Q5QJE6 756 aaKnown RBP19.33■□□□□ 0.69
CCDC57-201ENST00000327026 KTN1Q86UP2 1357 aaKnown RBP19.32■□□□□ 0.68
CCDC57-201ENST00000327026 ZRSR1Q15695 479 aaKnown RBP19.31■□□□□ 0.68
CCDC57-201ENST00000327026 PKD2Q13563 968 aa19.31■□□□□ 0.68
CCDC57-201ENST00000327026 HSCBQ8IWL3 235 aa19.29■□□□□ 0.68
CCDC57-201ENST00000327026 PLEKHG5O94827 1062 aa19.28■□□□□ 0.68
CCDC57-201ENST00000327026 MPHOSPH9Q99550 1183 aa19.28■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms