RNA–Protein interactions for RNA: ENST00000327026.7

CCDC57-201, Transcript of coiled-coil domain containing 57, humanhuman

TSL 2

Gene CCDC57, Length 5,379 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC57-201ENST00000327026 DCAF8L2P0C7V8 631 aa25.66■■□□□ 1.7
CCDC57-201ENST00000327026 NISCHQ9Y2I1 1504 aa25.38■■□□□ 1.65
CCDC57-201ENST00000327026 SUPT5HO00267 1087 aaKnown RBP24.81■■□□□ 1.56
CCDC57-201ENST00000327026 SHROOM4Q9ULL8 1493 aa24.31■■□□□ 1.48
CCDC57-201ENST00000327026 PELP1Q8IZL8 1130 aaKnown RBP23.92■■□□□ 1.42
CCDC57-201ENST00000327026 EHMT2Q96KQ7 1210 aa23.81■■□□□ 1.4
CCDC57-201ENST00000327026 MYT1Q01538 1121 aa23.69■■□□□ 1.38
CCDC57-201ENST00000327026 PCGF6Q9BYE7 350 aa23.47■■□□□ 1.35
CCDC57-201ENST00000327026 APLP2Q06481 763 aa23.45■■□□□ 1.34
CCDC57-201ENST00000327026 ZEB1P37275 1124 aaPredicted RBP23.37■■□□□ 1.33
CCDC57-201ENST00000327026 FAM9AQ8IZU1 332 aaPredicted RBP23.34■■□□□ 1.33
CCDC57-201ENST00000327026 CENPBP07199 599 aaPredicted RBP23.25■■□□□ 1.31
CCDC57-201ENST00000327026 TTBK1Q5TCY1 1321 aaPredicted RBP23.08■■□□□ 1.29
CCDC57-201ENST00000327026 TRIM41Q8WV44 630 aa23■■□□□ 1.27
CCDC57-201ENST00000327026 CCER1Q8TC90 406 aaPredicted RBP22.93■■□□□ 1.26
CCDC57-201ENST00000327026 HRCP23327 699 aa22.9■■□□□ 1.26
CCDC57-201ENST00000327026 RANGAP1P46060 587 aaPredicted RBP22.7■■□□□ 1.22
CCDC57-201ENST00000327026 ERICH6Q7L0X2 663 aa22.69■■□□□ 1.22
CCDC57-201ENST00000327026 UBTFP17480 764 aaKnown RBP22.63■■□□□ 1.21
CCDC57-201ENST00000327026 TRIM26Q12899 539 aaPredicted RBP22.54■■□□□ 1.2
CCDC57-201ENST00000327026 ATP1B4Q9UN42 357 aaPredicted RBP22.45■■□□□ 1.19
CCDC57-201ENST00000327026 YTHDC1Q96MU7 727 aaKnown RBP22.43■■□□□ 1.18
CCDC57-201ENST00000327026 NEFLP07196 543 aa22.4■■□□□ 1.18
CCDC57-201ENST00000327026 PPARGC1BQ86YN6 1023 aaKnown RBP22.36■■□□□ 1.17
CCDC57-201ENST00000327026 CHIC1Q5VXU3 224 aa22.28■■□□□ 1.16
CCDC57-201ENST00000327026 LOC105371045A0A1W2PR82 267 aa22.2■■□□□ 1.14
CCDC57-201ENST00000327026 HNRNPUL2Q1KMD3 747 aaKnown RBP21.9■■□□□ 1.1
CCDC57-201ENST00000327026 ITGAEP38570 1179 aa21.89■■□□□ 1.1
CCDC57-201ENST00000327026 DIEXFQ68CQ4 756 aaKnown RBP21.8■■□□□ 1.08
CCDC57-201ENST00000327026 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.77■■□□□ 1.08
CCDC57-201ENST00000327026 GTF3C3Q9Y5Q9 886 aa21.66■■□□□ 1.06
CCDC57-201ENST00000327026 POLR3GLQ9BT43 218 aa21.64■■□□□ 1.06
CCDC57-201ENST00000327026 DAXXQ9UER7 740 aaPredicted RBP21.63■■□□□ 1.05
CCDC57-201ENST00000327026 ACIN1Q9UKV3 1341 aaKnown RBP21.57■■□□□ 1.04
CCDC57-201ENST00000327026 CNGB1Q14028 1251 aaPredicted RBP21.43■■□□□ 1.02
CCDC57-201ENST00000327026 RTL5Q5HYW3 569 aaPredicted RBP21.43■■□□□ 1.02
CCDC57-201ENST00000327026 MYT1LQ9UL68 1186 aa21.39■■□□□ 1.01
CCDC57-201ENST00000327026 CLSPNQ9HAW4 1339 aa21.37■■□□□ 1.01
CCDC57-201ENST00000327026 FAM50AQ14320 339 aaKnown RBP21.36■■□□□ 1.01
CCDC57-201ENST00000327026 CCDC180Q9P1Z9 1646 aa21.35■■□□□ 1.01
CCDC57-201ENST00000327026 ABCC9O60706 1549 aa21.33■■□□□ 1
CCDC57-201ENST00000327026 DCAF1Q9Y4B6 1507 aa21.32■■□□□ 1
CCDC57-201ENST00000327026 ZNF316A6NFI3 1004 aaPredicted RBP21.29■■□□□ 1
CCDC57-201ENST00000327026 NEUROD1Q13562 356 aa21.24■□□□□ 0.99
CCDC57-201ENST00000327026 TRIM52Q96A61 297 aa21.2■□□□□ 0.98
CCDC57-201ENST00000327026 ANP32CO43423 234 aa21.18■□□□□ 0.98
CCDC57-201ENST00000327026 BCANQ96GW7 911 aa21.17■□□□□ 0.98
CCDC57-201ENST00000327026 CDK11AQ9UQ88 783 aaPredicted RBP21.14■□□□□ 0.97
CCDC57-201ENST00000327026 PABPN1Q86U42 306 aaKnown RBP eCLIP21.12■□□□□ 0.97
CCDC57-201ENST00000327026 ZCCHC6Q5VYS8 1495 aaKnown RBP21.12■□□□□ 0.97
CCDC57-201ENST00000327026 SLC4A1APQ9BWU0 796 aaKnown RBP21.08■□□□□ 0.97
CCDC57-201ENST00000327026 SCAF1Q9H7N4 1312 aaKnown RBP21.07■□□□□ 0.96
CCDC57-201ENST00000327026 CSRNP3Q8WYN3 585 aa21.05■□□□□ 0.96
CCDC57-201ENST00000327026 ZNF326Q5BKZ1 582 aaKnown RBP20.93■□□□□ 0.94
CCDC57-201ENST00000327026 ANP32AP39687 249 aaKnown RBP20.77■□□□□ 0.92
CCDC57-201ENST00000327026 P3H3Q8IVL6 736 aa20.77■□□□□ 0.92
CCDC57-201ENST00000327026 SCRIBQ14160 1630 aa20.72■□□□□ 0.91
CCDC57-201ENST00000327026 FKBP8Q14318 412 aa20.67■□□□□ 0.9
CCDC57-201ENST00000327026 ZBTB47Q9UFB7 747 aaPredicted RBP20.65■□□□□ 0.9
CCDC57-201ENST00000327026 RB1CC1Q8TDY2 1594 aa20.64■□□□□ 0.9
CCDC57-201ENST00000327026 CANXP27824 592 aaKnown RBP20.64■□□□□ 0.89
CCDC57-201ENST00000327026 TONSLQ96HA7 1378 aa20.63■□□□□ 0.89
CCDC57-201ENST00000327026 FBLN2P98095 1184 aa20.62■□□□□ 0.89
CCDC57-201ENST00000327026 ANP32EQ9BTT0 268 aa20.59■□□□□ 0.89
CCDC57-201ENST00000327026 ARID3CA6NKF2 412 aa20.58■□□□□ 0.89
CCDC57-201ENST00000327026 DDX10Q13206 875 aaKnown RBP20.58■□□□□ 0.88
CCDC57-201ENST00000327026 NACADO15069 1562 aa20.56■□□□□ 0.88
CCDC57-201ENST00000327026 HNRNPUQ00839 825 aaKnown RBP eCLIP20.55■□□□□ 0.88
CCDC57-201ENST00000327026 GLIPR1L2Q4G1C9 344 aa20.53■□□□□ 0.88
CCDC57-201ENST00000327026 ZNF777Q9ULD5 760 aaPredicted RBP20.52■□□□□ 0.88
CCDC57-201ENST00000327026 NPM2Q86SE8 214 aaKnown RBP20.5■□□□□ 0.87
CCDC57-201ENST00000327026 NEFMP07197 916 aa20.49■□□□□ 0.87
CCDC57-201ENST00000327026 MYO15BQ96JP2 1530 aa20.48■□□□□ 0.87
CCDC57-201ENST00000327026 FAM9BQ8IZU0 186 aa20.44■□□□□ 0.86
CCDC57-201ENST00000327026 MIER1Q8N108 512 aa20.44■□□□□ 0.86
CCDC57-201ENST00000327026 EIF5BO60841 1220 aaKnown RBP20.41■□□□□ 0.86
CCDC57-201ENST00000327026 BCL11AQ9H165 835 aa20.38■□□□□ 0.85
CCDC57-201ENST00000327026 CLIP1P30622 1438 aa20.35■□□□□ 0.85
CCDC57-201ENST00000327026 CCDC136Q96JN2 1154 aa20.32■□□□□ 0.84
CCDC57-201ENST00000327026 TMC1Q8TDI8 760 aa20.3■□□□□ 0.84
CCDC57-201ENST00000327026 SLC24A1O60721 1099 aa20.29■□□□□ 0.84
CCDC57-201ENST00000327026 CHIC2Q9UKJ5 165 aa20.29■□□□□ 0.84
CCDC57-201ENST00000327026 MRS2Q9HD23 443 aa20.28■□□□□ 0.84
CCDC57-201ENST00000327026 UPF2Q9HAU5 1272 aaKnown RBP20.26■□□□□ 0.83
CCDC57-201ENST00000327026 EEA1Q15075 1411 aa20.26■□□□□ 0.83
CCDC57-201ENST00000327026 SALL2Q9Y467 1007 aaPredicted RBP20.24■□□□□ 0.83
CCDC57-201ENST00000327026 NBR1Q14596 966 aa20.24■□□□□ 0.83
CCDC57-201ENST00000327026 CEP162Q5TB80 1403 aa20.24■□□□□ 0.83
CCDC57-201ENST00000327026 MTUS2Q5JR59 1369 aa20.23■□□□□ 0.83
CCDC57-201ENST00000327026 RSF1Q96T23 1441 aaPredicted RBP20.21■□□□□ 0.83
CCDC57-201ENST00000327026 GOLGA3Q08378 1498 aa20.2■□□□□ 0.82
CCDC57-201ENST00000327026 ANP32BQ92688 251 aaKnown RBP20.2■□□□□ 0.82
CCDC57-201ENST00000327026 GOLGA6L2Q8N9W4 650 aaPredicted RBP20.2■□□□□ 0.82
CCDC57-201ENST00000327026 HSP90AA1P07900 732 aaKnown RBP20.19■□□□□ 0.82
CCDC57-201ENST00000327026 HIRIP3Q9BW71 556 aaPredicted RBP20.17■□□□□ 0.82
CCDC57-201ENST00000327026 EIF4G2P78344 907 aaKnown RBP eCLIP20.17■□□□□ 0.824e-7■■■□□ 19
CCDC57-201ENST00000327026 CHGAP10645 457 aaKnown RBP20.14■□□□□ 0.82
CCDC57-201ENST00000327026 IRX6P78412 446 aaPredicted RBP20.14■□□□□ 0.82
CCDC57-201ENST00000327026 WDR43Q15061 677 aaKnown RBP eCLIP20.12■□□□□ 0.81
CCDC57-201ENST00000327026 SUPT16HQ9Y5B9 1047 aaKnown RBP20.12■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms