RNA–Protein interactions for RNA: ENST00000325083.12

PCM1-201, Transcript of pericentriolar material 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCM1, Length 6,820 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCM1-201ENST00000325083 TNNT2P45379 298 aaPredicted RBP18.68■□□□□ 0.58
PCM1-201ENST00000325083 ZRSR1Q15695 479 aaKnown RBP18.68■□□□□ 0.58
PCM1-201ENST00000325083 NCBP3Q53F19 620 aaKnown RBP18.68■□□□□ 0.58
PCM1-201ENST00000325083 BECN1Q14457 450 aa18.66■□□□□ 0.58
PCM1-201ENST00000325083 SENP3-EIF4A1A0A087X0R7 540 aa18.65■□□□□ 0.58
PCM1-201ENST00000325083 MRS2Q9HD23 443 aa18.65■□□□□ 0.58
PCM1-201ENST00000325083 HIRIP3Q9BW71 556 aaPredicted RBP18.64■□□□□ 0.57
PCM1-201ENST00000325083 NPM1P06748 294 aaKnown RBP eCLIP18.63■□□□□ 0.57
PCM1-201ENST00000325083 DDRGK1Q96HY6 314 aa18.63■□□□□ 0.57
PCM1-201ENST00000325083 GOLGA6L22H0YM25 854 aa18.62■□□□□ 0.57
PCM1-201ENST00000325083 PLCB2Q00722 1185 aa18.58■□□□□ 0.56
PCM1-201ENST00000325083 HAP1P54257 671 aaPredicted RBP18.57■□□□□ 0.56
PCM1-201ENST00000325083 AMER1Q5JTC6 1135 aaPredicted RBP18.57■□□□□ 0.56
PCM1-201ENST00000325083 NAP1L5Q96NT1 182 aaPredicted RBP18.57■□□□□ 0.56
PCM1-201ENST00000325083 RTN4Q9NQC3 1192 aaKnown RBP18.57■□□□□ 0.56
PCM1-201ENST00000325083 CASC1Q6TDU7 716 aa18.55■□□□□ 0.56
PCM1-201ENST00000325083 LAS1LQ9Y4W2 734 aaKnown RBP18.52■□□□□ 0.56
PCM1-201ENST00000325083 PPM1GO15355 546 aaPredicted RBP18.5■□□□□ 0.55
PCM1-201ENST00000325083 NPHP1O15259 732 aa18.5■□□□□ 0.55
PCM1-201ENST00000325083 CLSTN1O94985 981 aa18.48■□□□□ 0.55
PCM1-201ENST00000325083 PPP1R15AO75807 674 aaPredicted RBP18.48■□□□□ 0.55
PCM1-201ENST00000325083 CSRNP3Q8WYN3 585 aa18.48■□□□□ 0.55
PCM1-201ENST00000325083 NAP1L2Q9ULW6 460 aaPredicted RBP18.48■□□□□ 0.55
PCM1-201ENST00000325083 ANP32EQ9BTT0 268 aa18.45■□□□□ 0.54
PCM1-201ENST00000325083 FTSJ3Q8IY81 847 aaKnown RBP18.45■□□□□ 0.54
PCM1-201ENST00000325083 GOLGA6L6A8MZA4 724 aa18.4■□□□□ 0.54
PCM1-201ENST00000325083 MIER1Q8N108 512 aa18.4■□□□□ 0.54
PCM1-201ENST00000325083 HSP90AB1P08238 724 aaKnown RBP18.38■□□□□ 0.53
PCM1-201ENST00000325083 NEUROD2Q15784 382 aa18.37■□□□□ 0.53
PCM1-201ENST00000325083 FGD1P98174 961 aa18.36■□□□□ 0.53
PCM1-201ENST00000325083 OS9Q13438 667 aaPredicted RBP18.36■□□□□ 0.53
PCM1-201ENST00000325083 TSPY4P0CV99 314 aa18.36■□□□□ 0.53
PCM1-201ENST00000325083 TSPY10P0CW01 314 aa18.36■□□□□ 0.53
PCM1-201ENST00000325083 LMOD2Q6P5Q4 547 aa18.34■□□□□ 0.53
PCM1-201ENST00000325083 RGL3Q3MIN7 710 aa18.34■□□□□ 0.53
PCM1-201ENST00000325083 RRP7BPQ9NSQ0 103 aa18.32■□□□□ 0.52
PCM1-201ENST00000325083 CFAP53Q96M91 514 aa18.31■□□□□ 0.52
PCM1-201ENST00000325083 GOLGA2Q08379 1002 aa18.31■□□□□ 0.52
PCM1-201ENST00000325083 RGS3P49796 1198 aa18.31■□□□□ 0.52
PCM1-201ENST00000325083 KCNJ4P48050 445 aa18.31■□□□□ 0.52
PCM1-201ENST00000325083 ARID4BQ4LE39 1312 aaPredicted RBP18.31■□□□□ 0.52
PCM1-201ENST00000325083 EIF4G2P78344 907 aaKnown RBP eCLIP18.3■□□□□ 0.52
PCM1-201ENST00000325083 FRAT1Q92837 279 aaPredicted RBP18.29■□□□□ 0.52
PCM1-201ENST00000325083 SUPT16HQ9Y5B9 1047 aaKnown RBP18.29■□□□□ 0.52
PCM1-201ENST00000325083 SPRYD3Q8NCJ5 442 aa18.29■□□□□ 0.52
PCM1-201ENST00000325083 DRC7Q8IY82 874 aa18.28■□□□□ 0.52
PCM1-201ENST00000325083 ERICH6BQ5W0A0 696 aa18.28■□□□□ 0.52
PCM1-201ENST00000325083 KCNH8Q96L42 1107 aa18.28■□□□□ 0.52
PCM1-201ENST00000325083 ISY1Q9ULR0 285 aaKnown RBP18.28■□□□□ 0.52
PCM1-201ENST00000325083 MAPK8IP3Q9UPT6 1336 aa18.24■□□□□ 0.51
PCM1-201ENST00000325083 KNSTRNQ9Y448 316 aa18.23■□□□□ 0.51
PCM1-201ENST00000325083 MTUS2Q5JR59 1369 aa18.23■□□□□ 0.51
PCM1-201ENST00000325083 CHAF1AQ13111 956 aaPredicted RBP18.22■□□□□ 0.51
PCM1-201ENST00000325083 ARID3AQ99856 593 aa18.21■□□□□ 0.51
PCM1-201ENST00000325083 GOLGA6L4A6NEF3 574 aa18.21■□□□□ 0.51
PCM1-201ENST00000325083 PRM3Q9NNZ6 103 aa18.2■□□□□ 0.5
PCM1-201ENST00000325083 NRDCO43847 1150 aa18.2■□□□□ 0.5
PCM1-201ENST00000325083 MSNP26038 577 aaKnown RBP18.18■□□□□ 0.5
PCM1-201ENST00000325083 CC2D1BQ5T0F9 858 aaKnown RBP18.18■□□□□ 0.5
PCM1-201ENST00000325083 NOP58Q9Y2X3 529 aaKnown RBP18.17■□□□□ 0.5
PCM1-201ENST00000325083 SCRIBQ14160 1630 aa18.15■□□□□ 0.5
PCM1-201ENST00000325083 U2SURPO15042 1029 aaKnown RBP18.15■□□□□ 0.5
PCM1-201ENST00000325083 CHMP7Q8WUX9 453 aaPredicted RBP18.14■□□□□ 0.49
PCM1-201ENST00000325083 PDE4CQ08493 712 aa18.14■□□□□ 0.49
PCM1-201ENST00000325083 NOC3LQ8WTT2 800 aaKnown RBP18.14■□□□□ 0.49
PCM1-201ENST00000325083 HSCBQ8IWL3 235 aa18.14■□□□□ 0.49
PCM1-201ENST00000325083 GNL2Q13823 731 aaKnown RBP18.13■□□□□ 0.49
PCM1-201ENST00000325083 SOX12O15370 315 aa18.12■□□□□ 0.49
PCM1-201ENST00000325083 POGKQ9P215 609 aa18.12■□□□□ 0.49
PCM1-201ENST00000325083 PNNQ9H307 717 aaKnown RBP18.11■□□□□ 0.49
PCM1-201ENST00000325083 KIAA2012Q0VF49 1180 aa18.1■□□□□ 0.49
PCM1-201ENST00000325083 NUDCQ9Y266 331 aa18.09■□□□□ 0.49
PCM1-201ENST00000325083 CARD11Q9BXL7 1154 aa18.09■□□□□ 0.49
PCM1-201ENST00000325083 CDCA8Q53HL2 280 aa18.06■□□□□ 0.48
PCM1-201ENST00000325083 ANO8Q9HCE9 1232 aaPredicted RBP18.06■□□□□ 0.48
PCM1-201ENST00000325083 MCCP23508 829 aa18.05■□□□□ 0.48
PCM1-201ENST00000325083 B4GALNT3Q6L9W6 998 aa18.05■□□□□ 0.48
PCM1-201ENST00000325083 APBB1O00213 710 aa18.04■□□□□ 0.48
PCM1-201ENST00000325083 L1TD1Q5T7N2 865 aaKnown RBP18.03■□□□□ 0.48
PCM1-201ENST00000325083 PPP4R2Q9NY27 417 aa18.02■□□□□ 0.48
PCM1-201ENST00000325083 DCAF1Q9Y4B6 1507 aa18■□□□□ 0.47
PCM1-201ENST00000325083 CHMP4BQ9H444 224 aaKnown RBP17.99■□□□□ 0.47
PCM1-201ENST00000325083 A0A0U1RQG5 324 aaPredicted RBP17.99■□□□□ 0.47
PCM1-201ENST00000325083 GZF1Q9H116 711 aaPredicted RBP17.98■□□□□ 0.47
PCM1-201ENST00000325083 DEKP35659 375 aaKnown RBP17.97■□□□□ 0.47
PCM1-201ENST00000325083 HSP90B1P14625 803 aaKnown RBP17.96■□□□□ 0.47
PCM1-201ENST00000325083 MS4A1P11836 297 aa17.95■□□□□ 0.46
PCM1-201ENST00000325083 ZNF330Q9Y3S2 320 aaPredicted RBP17.95■□□□□ 0.46
PCM1-201ENST00000325083 ZBTB4Q9P1Z0 1013 aaPredicted RBP17.95■□□□□ 0.46
PCM1-201ENST00000325083 CREBRFQ8IUR6 639 aa17.94■□□□□ 0.46
PCM1-201ENST00000325083 PLEKHD1A6NEE1 506 aa17.93■□□□□ 0.46
PCM1-201ENST00000325083 TNNT3P45378 269 aaPredicted RBP17.92■□□□□ 0.46
PCM1-201ENST00000325083 ZCCHC6Q5VYS8 1495 aaKnown RBP17.92■□□□□ 0.46
PCM1-201ENST00000325083 SAFB2Q14151 953 aaKnown RBP eCLIP17.92■□□□□ 0.46
PCM1-201ENST00000325083 KIAA1211Q6ZU35 1233 aa17.91■□□□□ 0.46
PCM1-201ENST00000325083 RTF1Q92541 710 aaKnown RBP17.9■□□□□ 0.46
PCM1-201ENST00000325083 SRPK2P78362 688 aaKnown RBP17.88■□□□□ 0.45
PCM1-201ENST00000325083 FBXO3Q9UK99 471 aa17.88■□□□□ 0.45
PCM1-201ENST00000325083 RSF1Q96T23 1441 aaPredicted RBP17.87■□□□□ 0.45
PCM1-201ENST00000325083 CLIP1P30622 1438 aa17.86■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms