RNA–Protein interactions for RNA: ENST00000323871.9

PXN-203, Transcript of paxillin, humanhuman

TSL 2

Gene PXN, Length 5,457 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PXN-203ENST00000323871 FAM9BQ8IZU0 186 aa23.81■■□□□ 1.4
PXN-203ENST00000323871 HNRNPUQ00839 825 aaKnown RBP eCLIP23.8■■□□□ 1.4
PXN-203ENST00000323871 DDX10Q13206 875 aaKnown RBP23.77■■□□□ 1.4
PXN-203ENST00000323871 CFDP1Q9UEE9 299 aaPredicted RBP23.76■■□□□ 1.39
PXN-203ENST00000323871 A0A0G2JS52 829 aa23.75■■□□□ 1.39
PXN-203ENST00000323871 CDCA8Q53HL2 280 aa23.74■■□□□ 1.39
PXN-203ENST00000323871 RRP7BPQ9NSQ0 103 aa23.74■■□□□ 1.39
PXN-203ENST00000323871 ANP32BQ92688 251 aaKnown RBP23.74■■□□□ 1.39
PXN-203ENST00000323871 HAP1P54257 671 aaPredicted RBP23.73■■□□□ 1.39
PXN-203ENST00000323871 MYH16Q9H6N6 1097 aa23.73■■□□□ 1.39
PXN-203ENST00000323871 ZBTB7CA1YPR0 619 aa23.72■■□□□ 1.39
PXN-203ENST00000323871 GLIPR1L2Q4G1C9 344 aa23.72■■□□□ 1.39
PXN-203ENST00000323871 EIF4G2P78344 907 aaKnown RBP eCLIP23.71■■□□□ 1.392e-7■■■■■ 49.6
PXN-203ENST00000323871 BAZ1AQ9NRL2 1556 aaPredicted RBP23.67■■□□□ 1.38
PXN-203ENST00000323871 MRS2Q9HD23 443 aa23.66■■□□□ 1.38
PXN-203ENST00000323871 CFAP53Q96M91 514 aa23.65■■□□□ 1.38
PXN-203ENST00000323871 CEP164Q9UPV0 1460 aa23.65■■□□□ 1.38
PXN-203ENST00000323871 SALL2Q9Y467 1007 aaPredicted RBP23.65■■□□□ 1.38
PXN-203ENST00000323871 CEP162Q5TB80 1403 aa23.59■■□□□ 1.37
PXN-203ENST00000323871 FKBP8Q14318 412 aa23.59■■□□□ 1.37
PXN-203ENST00000323871 HDGFP51858 240 aaKnown RBP23.55■■□□□ 1.36
PXN-203ENST00000323871 CCDC136Q96JN2 1154 aa23.54■■□□□ 1.36
PXN-203ENST00000323871 RGL3Q3MIN7 710 aa23.54■■□□□ 1.36
PXN-203ENST00000323871 KANK1Q14678 1352 aa23.53■■□□□ 1.36
PXN-203ENST00000323871 TNIKQ9UKE5 1360 aa23.51■■□□□ 1.35
PXN-203ENST00000323871 CCNB3Q8WWL7 1395 aa23.51■■□□□ 1.35
PXN-203ENST00000323871 PLEKHG5O94827 1062 aa23.5■■□□□ 1.35
PXN-203ENST00000323871 KNSTRNQ9Y448 316 aa23.5■■□□□ 1.35
PXN-203ENST00000323871 FHAD1B1AJZ9 1412 aa23.5■■□□□ 1.35
PXN-203ENST00000323871 POGKQ9P215 609 aa23.49■■□□□ 1.35
PXN-203ENST00000323871 TRHP20396 242 aaPredicted RBP23.48■■□□□ 1.35
PXN-203ENST00000323871 SENP3Q9H4L4 574 aaPredicted RBP23.47■■□□□ 1.35
PXN-203ENST00000323871 EIF4G1Q04637 1599 aaKnown RBP23.44■■□□□ 1.34
PXN-203ENST00000323871 CARD11Q9BXL7 1154 aa23.43■■□□□ 1.34
PXN-203ENST00000323871 NUDCQ9Y266 331 aa23.42■■□□□ 1.34
PXN-203ENST00000323871 PDS5BQ9NTI5 1447 aa23.42■■□□□ 1.34
PXN-203ENST00000323871 ANP32EQ9BTT0 268 aa23.41■■□□□ 1.34
PXN-203ENST00000323871 CARMIL1Q5VZK9 1371 aa23.39■■□□□ 1.34
PXN-203ENST00000323871 CARMIL2Q6F5E8 1435 aa23.38■■□□□ 1.33
PXN-203ENST00000323871 CUX2O14529 1486 aa23.38■■□□□ 1.33
PXN-203ENST00000323871 MAPK8IP3Q9UPT6 1336 aa23.37■■□□□ 1.33
PXN-203ENST00000323871 LMOD2Q6P5Q4 547 aa23.34■■□□□ 1.33
PXN-203ENST00000323871 SMARCA2P51531 1590 aa23.34■■□□□ 1.33
PXN-203ENST00000323871 CDK11BP21127 795 aaKnown RBP23.34■■□□□ 1.33
PXN-203ENST00000323871 PPM1GO15355 546 aaPredicted RBP23.34■■□□□ 1.33
PXN-203ENST00000323871 PNNQ9H307 717 aaKnown RBP23.33■■□□□ 1.33
PXN-203ENST00000323871 ARXQ96QS3 562 aa23.32■■□□□ 1.32
PXN-203ENST00000323871 CASC1Q6TDU7 716 aa23.27■■□□□ 1.32
PXN-203ENST00000323871 CHMP4BQ9H444 224 aaKnown RBP23.27■■□□□ 1.32
PXN-203ENST00000323871 HIRIP3Q9BW71 556 aaPredicted RBP23.26■■□□□ 1.31
PXN-203ENST00000323871 NBR1Q14596 966 aa23.25■■□□□ 1.31
PXN-203ENST00000323871 NPHP1O15259 732 aa23.23■■□□□ 1.31
PXN-203ENST00000323871 BECN1Q14457 450 aa23.22■■□□□ 1.31
PXN-203ENST00000323871 FTSJ3Q8IY81 847 aaKnown RBP23.22■■□□□ 1.31
PXN-203ENST00000323871 NCLP19338 710 aaKnown RBP23.21■■□□□ 1.31
PXN-203ENST00000323871 MLECQ14165 292 aa23.21■■□□□ 1.31
PXN-203ENST00000323871 TMF1P82094 1093 aa23.2■■□□□ 1.3
PXN-203ENST00000323871 MS4A1P11836 297 aa23.18■■□□□ 1.3
PXN-203ENST00000323871 CECR2Q9BXF3 1484 aa23.17■■□□□ 1.3
PXN-203ENST00000323871 DDRGK1Q96HY6 314 aa23.17■■□□□ 1.3
PXN-203ENST00000323871 SOGA1O94964 1423 aa23.15■■□□□ 1.3
PXN-203ENST00000323871 LAS1LQ9Y4W2 734 aaKnown RBP23.14■■□□□ 1.3
PXN-203ENST00000323871 EFCAB2Q5VUJ9 269 aa23.11■■□□□ 1.29
PXN-203ENST00000323871 ARHGAP35Q9NRY4 1499 aa23.11■■□□□ 1.29
PXN-203ENST00000323871 GOLGA6L22H0YM25 854 aa23.1■■□□□ 1.29
PXN-203ENST00000323871 SRPK2P78362 688 aaKnown RBP23.09■■□□□ 1.29
PXN-203ENST00000323871 DCAF11Q8TEB1 546 aa23.09■■□□□ 1.29
PXN-203ENST00000323871 GGT6Q6P531 493 aa23.08■■□□□ 1.28
PXN-203ENST00000323871 TIMELESSQ9UNS1 1208 aa23.08■■□□□ 1.28
PXN-203ENST00000323871 MIER1Q8N108 512 aa23.07■■□□□ 1.28
PXN-203ENST00000323871 U2SURPO15042 1029 aaKnown RBP23.06■■□□□ 1.28
PXN-203ENST00000323871 FMN1Q68DA7 1419 aa23.06■■□□□ 1.28
PXN-203ENST00000323871 NEUROD2Q15784 382 aa23.05■■□□□ 1.28
PXN-203ENST00000323871 ZRSR1Q15695 479 aaKnown RBP23.04■■□□□ 1.28
PXN-203ENST00000323871 HDGFL2Q7Z4V5 671 aaPredicted RBP23.03■■□□□ 1.28
PXN-203ENST00000323871 CCDC88BA6NC98 1476 aa23.02■■□□□ 1.28
PXN-203ENST00000323871 OS9Q13438 667 aaPredicted RBP23.02■■□□□ 1.28
PXN-203ENST00000323871 TNNT2P45379 298 aaPredicted RBP23.01■■□□□ 1.27
PXN-203ENST00000323871 GOLGA2Q08379 1002 aa23■■□□□ 1.27
PXN-203ENST00000323871 IRX6P78412 446 aaPredicted RBP23■■□□□ 1.27
PXN-203ENST00000323871 CC2D1BQ5T0F9 858 aaKnown RBP22.99■■□□□ 1.27
PXN-203ENST00000323871 MORC1Q86VD1 984 aa22.98■■□□□ 1.27
PXN-203ENST00000323871 ANKRD30AQ9BXX3 1397 aa22.97■■□□□ 1.27
PXN-203ENST00000323871 SIN3AQ96ST3 1273 aa22.96■■□□□ 1.27
PXN-203ENST00000323871 TDRD9Q8NDG6 1382 aaKnown RBP22.95■■□□□ 1.27
PXN-203ENST00000323871 RTF1Q92541 710 aaKnown RBP22.95■■□□□ 1.26
PXN-203ENST00000323871 SETD5Q9C0A6 1442 aa22.94■■□□□ 1.26
PXN-203ENST00000323871 RSPH4AQ5TD94 716 aa22.94■■□□□ 1.26
PXN-203ENST00000323871 CADPSQ9ULU8 1353 aa22.93■■□□□ 1.26
PXN-203ENST00000323871 MROH2BQ7Z745 1585 aa22.92■■□□□ 1.26
PXN-203ENST00000323871 VPS8Q8N3P4 1428 aa22.92■■□□□ 1.26
PXN-203ENST00000323871 EID1Q9Y6B2 187 aa22.92■■□□□ 1.26
PXN-203ENST00000323871 MYO15BQ96JP2 1530 aa22.91■■□□□ 1.26
PXN-203ENST00000323871 PKD2Q13563 968 aa22.91■■□□□ 1.26
PXN-203ENST00000323871 EIF3AQ14152 1382 aaKnown RBP22.91■■□□□ 1.26
PXN-203ENST00000323871 FRAT1Q92837 279 aaPredicted RBP22.9■■□□□ 1.26
PXN-203ENST00000323871 CHMP4AQ9BY43 222 aa22.89■■□□□ 1.26
PXN-203ENST00000323871 TOP2AP11388 1531 aaKnown RBP22.88■■□□□ 1.25
PXN-203ENST00000323871 STK26Q9P289 416 aa22.88■■□□□ 1.25
PXN-203ENST00000323871 CALD1Q05682 793 aaKnown RBP22.88■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms