RNA–Protein interactions for RNA: ENST00000323853.9

SNRNP200-201, Transcript of small nuclear ribonucleoprotein U5 subunit 200, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRNP200, Length 7,165 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP200-201ENST00000323853 HSP90AA1P07900 732 aaKnown RBP14.62□□□□□ -0.07
SNRNP200-201ENST00000323853 HIRIP3Q9BW71 556 aaPredicted RBP14.62□□□□□ -0.07
SNRNP200-201ENST00000323853 ANP32BQ92688 251 aaKnown RBP14.61□□□□□ -0.07
SNRNP200-201ENST00000323853 EIF4G2P78344 907 aaKnown RBP eCLIP14.61□□□□□ -0.07
SNRNP200-201ENST00000323853 NPM1P06748 294 aaKnown RBP eCLIP14.6□□□□□ -0.07
SNRNP200-201ENST00000323853 RRP7BPQ9NSQ0 103 aa14.6□□□□□ -0.07
SNRNP200-201ENST00000323853 IRX6P78412 446 aaPredicted RBP14.58□□□□□ -0.08
SNRNP200-201ENST00000323853 CHMP7Q8WUX9 453 aaPredicted RBP14.57□□□□□ -0.08
SNRNP200-201ENST00000323853 NBR1Q14596 966 aa14.56□□□□□ -0.08
SNRNP200-201ENST00000323853 KIF27Q86VH2 1401 aa14.56□□□□□ -0.08
SNRNP200-201ENST00000323853 BAZ1AQ9NRL2 1556 aaPredicted RBP14.54□□□□□ -0.08
SNRNP200-201ENST00000323853 PLPPR3Q6T4P5 718 aa14.47□□□□□ -0.09
SNRNP200-201ENST00000323853 EIF5BO60841 1220 aaKnown RBP14.46□□□□□ -0.09
SNRNP200-201ENST00000323853 DDRGK1Q96HY6 314 aa14.45□□□□□ -0.1
SNRNP200-201ENST00000323853 PLEKHD1A6NEE1 506 aa14.44□□□□□ -0.1
SNRNP200-201ENST00000323853 MYH16Q9H6N6 1097 aa14.42□□□□□ -0.1
SNRNP200-201ENST00000323853 CECR2Q9BXF3 1484 aa14.4□□□□□ -0.1
SNRNP200-201ENST00000323853 KCNH8Q96L42 1107 aa14.39□□□□□ -0.11
SNRNP200-201ENST00000323853 CFDP1Q9UEE9 299 aaPredicted RBP14.39□□□□□ -0.11
SNRNP200-201ENST00000323853 ARXQ96QS3 562 aa14.38□□□□□ -0.11
SNRNP200-201ENST00000323853 SOGA1O94964 1423 aa14.37□□□□□ -0.11
SNRNP200-201ENST00000323853 SUPT16HQ9Y5B9 1047 aaKnown RBP14.37□□□□□ -0.11
SNRNP200-201ENST00000323853 BECN1Q14457 450 aa14.37□□□□□ -0.11
SNRNP200-201ENST00000323853 RGL3Q3MIN7 710 aa14.37□□□□□ -0.11
SNRNP200-201ENST00000323853 SIN3AQ96ST3 1273 aa14.37□□□□□ -0.11
SNRNP200-201ENST00000323853 CARD11Q9BXL7 1154 aa14.37□□□□□ -0.11
SNRNP200-201ENST00000323853 CCNB3Q8WWL7 1395 aa14.37□□□□□ -0.11
SNRNP200-201ENST00000323853 FHAD1B1AJZ9 1412 aa14.37□□□□□ -0.11
SNRNP200-201ENST00000323853 CDCA8Q53HL2 280 aa14.36□□□□□ -0.11
SNRNP200-201ENST00000323853 KNSTRNQ9Y448 316 aa14.34□□□□□ -0.11
SNRNP200-201ENST00000323853 EIF4G1Q04637 1599 aaKnown RBP14.34□□□□□ -0.11
SNRNP200-201ENST00000323853 CFAP53Q96M91 514 aa14.33□□□□□ -0.12
SNRNP200-201ENST00000323853 ABCC8Q09428 1581 aa14.32□□□□□ -0.12
SNRNP200-201ENST00000323853 GLIPR1L2Q4G1C9 344 aa14.32□□□□□ -0.12
SNRNP200-201ENST00000323853 ANP32EQ9BTT0 268 aa14.31□□□□□ -0.12
SNRNP200-201ENST00000323853 PPP4R2Q9NY27 417 aa14.3□□□□□ -0.12
SNRNP200-201ENST00000323853 PPP1R15AO75807 674 aaPredicted RBP14.3□□□□□ -0.12
SNRNP200-201ENST00000323853 CCDC88BA6NC98 1476 aa14.3□□□□□ -0.12
SNRNP200-201ENST00000323853 SENP3Q9H4L4 574 aaPredicted RBP14.3□□□□□ -0.12
SNRNP200-201ENST00000323853 CUX2O14529 1486 aa14.3□□□□□ -0.12
SNRNP200-201ENST00000323853 SENP3-EIF4A1A0A087X0R7 540 aa14.29□□□□□ -0.12
SNRNP200-201ENST00000323853 MROH2BQ7Z745 1585 aa14.29□□□□□ -0.12
SNRNP200-201ENST00000323853 CARMIL1Q5VZK9 1371 aa14.28□□□□□ -0.12
SNRNP200-201ENST00000323853 ARHGAP35Q9NRY4 1499 aa14.28□□□□□ -0.12
SNRNP200-201ENST00000323853 VPS8Q8N3P4 1428 aa14.28□□□□□ -0.12
SNRNP200-201ENST00000323853 SETD5Q9C0A6 1442 aa14.28□□□□□ -0.12
SNRNP200-201ENST00000323853 ZBTB7CA1YPR0 619 aa14.26□□□□□ -0.13
SNRNP200-201ENST00000323853 ERCC6Q03468 1493 aa14.25□□□□□ -0.13
SNRNP200-201ENST00000323853 FTSJ3Q8IY81 847 aaKnown RBP14.24□□□□□ -0.13
SNRNP200-201ENST00000323853 TIMELESSQ9UNS1 1208 aa14.23□□□□□ -0.13
SNRNP200-201ENST00000323853 NCLP19338 710 aaKnown RBP14.23□□□□□ -0.13
SNRNP200-201ENST00000323853 CC2D1BQ5T0F9 858 aaKnown RBP14.22□□□□□ -0.13
SNRNP200-201ENST00000323853 C14orf37Q86TY3 774 aa14.22□□□□□ -0.13
SNRNP200-201ENST00000323853 GOLGA6L22H0YM25 854 aa14.22□□□□□ -0.13
SNRNP200-201ENST00000323853 CASC1Q6TDU7 716 aa14.22□□□□□ -0.13
SNRNP200-201ENST00000323853 CCER2I3L3R5 266 aa14.21□□□□□ -0.13
SNRNP200-201ENST00000323853 PPM1GO15355 546 aaPredicted RBP14.21□□□□□ -0.13
SNRNP200-201ENST00000323853 TOP2AP11388 1531 aaKnown RBP14.21□□□□□ -0.13
SNRNP200-201ENST00000323853 SMARCA2P51531 1590 aa14.21□□□□□ -0.14
SNRNP200-201ENST00000323853 MAPK8IP3Q9UPT6 1336 aa14.2□□□□□ -0.14
SNRNP200-201ENST00000323853 WIZO95785 1651 aa14.19□□□□□ -0.14
SNRNP200-201ENST00000323853 TRIM44Q96DX7 344 aaPredicted RBP14.19□□□□□ -0.14
SNRNP200-201ENST00000323853 NOP58Q9Y2X3 529 aaKnown RBP14.19□□□□□ -0.14
SNRNP200-201ENST00000323853 TMF1P82094 1093 aa14.17□□□□□ -0.14
SNRNP200-201ENST00000323853 NEUROD2Q15784 382 aa14.17□□□□□ -0.14
SNRNP200-201ENST00000323853 NUDCQ9Y266 331 aa14.17□□□□□ -0.14
SNRNP200-201ENST00000323853 HSPA5P11021 654 aaKnown RBP14.17□□□□□ -0.14
SNRNP200-201ENST00000323853 LAS1LQ9Y4W2 734 aaKnown RBP14.16□□□□□ -0.14
SNRNP200-201ENST00000323853 DCAF11Q8TEB1 546 aa14.16□□□□□ -0.14
SNRNP200-201ENST00000323853 KANK4Q5T7N3 995 aaPredicted RBP14.15□□□□□ -0.14
SNRNP200-201ENST00000323853 KANK1Q14678 1352 aa14.15□□□□□ -0.14
SNRNP200-201ENST00000323853 B4GALNT3Q6L9W6 998 aa14.14□□□□□ -0.15
SNRNP200-201ENST00000323853 FRAT1Q92837 279 aaPredicted RBP14.14□□□□□ -0.15
SNRNP200-201ENST00000323853 PLEKHG5O94827 1062 aa14.13□□□□□ -0.15
SNRNP200-201ENST00000323853 RGS3P49796 1198 aa14.13□□□□□ -0.15
SNRNP200-201ENST00000323853 POGKQ9P215 609 aa14.13□□□□□ -0.15
SNRNP200-201ENST00000323853 RAB3GAP2Q9H2M9 1393 aa14.13□□□□□ -0.15
SNRNP200-201ENST00000323853 TNNT2P45379 298 aaPredicted RBP14.12□□□□□ -0.15
SNRNP200-201ENST00000323853 MS4A1P11836 297 aa14.11□□□□□ -0.15
SNRNP200-201ENST00000323853 PNNQ9H307 717 aaKnown RBP14.11□□□□□ -0.15
SNRNP200-201ENST00000323853 ARID4BQ4LE39 1312 aaPredicted RBP14.1□□□□□ -0.15
SNRNP200-201ENST00000323853 CHMP4BQ9H444 224 aaKnown RBP14.1□□□□□ -0.15
SNRNP200-201ENST00000323853 FMN1Q68DA7 1419 aa14.09□□□□□ -0.15
SNRNP200-201ENST00000323853 A0A0G2JS52 829 aa14.08□□□□□ -0.15
SNRNP200-201ENST00000323853 KTN1Q86UP2 1357 aaKnown RBP14.08□□□□□ -0.16
SNRNP200-201ENST00000323853 U2SURPO15042 1029 aaKnown RBP14.07□□□□□ -0.16
SNRNP200-201ENST00000323853 PTMAP06454 111 aaKnown RBP14.06□□□□□ -0.16
SNRNP200-201ENST00000323853 HSP90AB1P08238 724 aaKnown RBP14.05□□□□□ -0.16
SNRNP200-201ENST00000323853 PKD2Q13563 968 aa14.05□□□□□ -0.16
SNRNP200-201ENST00000323853 FOXD1Q16676 465 aa14.04□□□□□ -0.16
SNRNP200-201ENST00000323853 ROCK2O75116 1388 aaKnown RBP14.03□□□□□ -0.16
SNRNP200-201ENST00000323853 MPHOSPH9Q99550 1183 aa14.03□□□□□ -0.16
SNRNP200-201ENST00000323853 CARMIL2Q6F5E8 1435 aa14.03□□□□□ -0.16
SNRNP200-201ENST00000323853 MORC1Q86VD1 984 aa14.03□□□□□ -0.16
SNRNP200-201ENST00000323853 RAPGEF2Q9Y4G8 1499 aa14.02□□□□□ -0.16
SNRNP200-201ENST00000323853 TPRNQ4KMQ1 711 aa14.02□□□□□ -0.17
SNRNP200-201ENST00000323853 RBM19Q9Y4C8 960 aaKnown RBP14.01□□□□□ -0.17
SNRNP200-201ENST00000323853 ZRSR1Q15695 479 aaKnown RBP14.01□□□□□ -0.17
SNRNP200-201ENST00000323853 ERICH6BQ5W0A0 696 aa14.01□□□□□ -0.17
SNRNP200-201ENST00000323853 CDK11BP21127 795 aaKnown RBP14□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms