RNA–Protein interactions for RNA: ENST00000320493.9

CFHR1-201, Transcript of complement factor H related 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CFHR1, Length 1,271 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CFHR1-201ENST00000320493 METRNQ9UJH8 293 aa12.51□□□□□ -0.41
CFHR1-201ENST00000320493 MAMSTRQ6ZN01 415 aa12.49□□□□□ -0.41
CFHR1-201ENST00000320493 SLC39A7Q92504 469 aa12.49□□□□□ -0.41
CFHR1-201ENST00000320493 ATMINO43313 823 aaPredicted RBP12.48□□□□□ -0.41
CFHR1-201ENST00000320493 MNX1P50219 401 aaPredicted RBP12.48□□□□□ -0.41
CFHR1-201ENST00000320493 NPM1P06748 294 aaKnown RBP eCLIP12.46□□□□□ -0.41
CFHR1-201ENST00000320493 MS4A3Q96HJ5 214 aa12.42□□□□□ -0.42
CFHR1-201ENST00000320493 FAM163AQ96GL9 167 aaPredicted RBP12.38□□□□□ -0.43
CFHR1-201ENST00000320493 SCUBE2Q9NQ36 999 aa12.35□□□□□ -0.43
CFHR1-201ENST00000320493 ATN1P54259 1190 aaPredicted RBP12.3□□□□□ -0.44
CFHR1-201ENST00000320493 SPDYE4A6NLX3 237 aa12.29□□□□□ -0.44
CFHR1-201ENST00000320493 POTEFA5A3E0 1075 aa12.28□□□□□ -0.44
CFHR1-201ENST00000320493 CCDC61Q9Y6R9 512 aa12.23□□□□□ -0.45
CFHR1-201ENST00000320493 CDAN1Q8IWY9 1227 aa12.2□□□□□ -0.46
CFHR1-201ENST00000320493 KIF12Q96FN5 646 aa12.19□□□□□ -0.46
CFHR1-201ENST00000320493 BMP2KQ9NSY1 1161 aaPredicted RBP12.18□□□□□ -0.46
CFHR1-201ENST00000320493 TSPYL2Q9H2G4 693 aaPredicted RBP12.16□□□□□ -0.46
CFHR1-201ENST00000320493 TIE1P35590 1138 aa12.13□□□□□ -0.47
CFHR1-201ENST00000320493 TRPC6Q9Y210 931 aa12.12□□□□□ -0.47
CFHR1-201ENST00000320493 COLQQ9Y215 455 aaPredicted RBP12.1□□□□□ -0.47
CFHR1-201ENST00000320493 MAP3K13O43283 966 aa12.05□□□□□ -0.48
CFHR1-201ENST00000320493 TTLL13PA6NNM8 815 aa12.03□□□□□ -0.48
CFHR1-201ENST00000320493 SEC24BO95487 1268 aa12.03□□□□□ -0.48
CFHR1-201ENST00000320493 ST18O60284 1047 aa12.02□□□□□ -0.49
CFHR1-201ENST00000320493 IER5LQ5T953 404 aa12.01□□□□□ -0.49
CFHR1-201ENST00000320493 PROM2Q8N271 834 aa11.99□□□□□ -0.49
CFHR1-201ENST00000320493 MMRN1Q13201 1228 aa11.96□□□□□ -0.49
CFHR1-201ENST00000320493 SLAIN1Q8ND83 568 aa11.94□□□□□ -0.5
CFHR1-201ENST00000320493 FKBP8Q14318 412 aa11.93□□□□□ -0.5
CFHR1-201ENST00000320493 SPNS2Q8IVW8 549 aa11.93□□□□□ -0.5
CFHR1-201ENST00000320493 SGIP1Q9BQI5 828 aa11.93□□□□□ -0.5
CFHR1-201ENST00000320493 TRIM35Q9UPQ4 493 aa11.93□□□□□ -0.5
CFHR1-201ENST00000320493 RASEFQ8IZ41 740 aa11.92□□□□□ -0.5
CFHR1-201ENST00000320493 TMEM121BQ9BXQ6 578 aaPredicted RBP11.86□□□□□ -0.51
CFHR1-201ENST00000320493 PCDHB13Q9Y5F0 798 aa11.82□□□□□ -0.52
CFHR1-201ENST00000320493 PLEKHG5O94827 1062 aa11.8□□□□□ -0.52
CFHR1-201ENST00000320493 IRX5P78411 483 aaPredicted RBP11.78□□□□□ -0.52
CFHR1-201ENST00000320493 MIER1Q8N108 512 aa11.78□□□□□ -0.52
CFHR1-201ENST00000320493 PLCG2P16885 1265 aa11.77□□□□□ -0.53
CFHR1-201ENST00000320493 SNPHO15079 494 aa11.76□□□□□ -0.53
CFHR1-201ENST00000320493 IFNL1Q8IU54 200 aa11.76□□□□□ -0.53
CFHR1-201ENST00000320493 TMEM106CQ9BVX2 250 aa11.74□□□□□ -0.53
CFHR1-201ENST00000320493 NUBP1P53384 320 aa11.69□□□□□ -0.54
CFHR1-201ENST00000320493 MARVELD3Q96A59 401 aa11.69□□□□□ -0.54
CFHR1-201ENST00000320493 OCEL1Q9H607 264 aa11.69□□□□□ -0.54
CFHR1-201ENST00000320493 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.66□□□□□ -0.54
CFHR1-201ENST00000320493 KRTAP3-3Q9BYR6 98 aa11.61□□□□□ -0.55
CFHR1-201ENST00000320493 KRTAP3-2Q9BYR7 98 aa11.61□□□□□ -0.55
CFHR1-201ENST00000320493 ZBTB47Q9UFB7 747 aaPredicted RBP11.6□□□□□ -0.55
CFHR1-201ENST00000320493 PLCD3Q8N3E9 789 aa11.58□□□□□ -0.56
CFHR1-201ENST00000320493 POTEB3A0JP26 581 aa11.56□□□□□ -0.56
CFHR1-201ENST00000320493 POTEBQ6S5H4 581 aa11.56□□□□□ -0.56
CFHR1-201ENST00000320493 FAM212AQ96EL1 285 aa11.56□□□□□ -0.56
CFHR1-201ENST00000320493 EMP3P54852 163 aa11.55□□□□□ -0.56
CFHR1-201ENST00000320493 HS3ST6Q96QI5 342 aa11.52□□□□□ -0.57
CFHR1-201ENST00000320493 PDCD7Q8N8D1 485 aaKnown RBP11.49□□□□□ -0.57
CFHR1-201ENST00000320493 FAM205CA6NFA0 338 aa11.47□□□□□ -0.57
CFHR1-201ENST00000320493 L3MBTL3Q96JM7 780 aaPredicted RBP11.45□□□□□ -0.58
CFHR1-201ENST00000320493 C3orf67Q6ZVT6 689 aa11.44□□□□□ -0.58
CFHR1-201ENST00000320493 FBXO3Q9UK99 471 aa11.44□□□□□ -0.58
CFHR1-201ENST00000320493 PCDHB8Q9UN66 801 aa11.42□□□□□ -0.58
CFHR1-201ENST00000320493 PYGBP11216 843 aa11.4□□□□□ -0.58
CFHR1-201ENST00000320493 VASPP50552 380 aaPredicted RBP11.4□□□□□ -0.58
CFHR1-201ENST00000320493 DCAF8Q5TAQ9 597 aa11.36□□□□□ -0.59
CFHR1-201ENST00000320493 ILDR1Q86SU0 546 aaPredicted RBP11.33□□□□□ -0.6
CFHR1-201ENST00000320493 HOXB3P14651 431 aaPredicted RBP11.32□□□□□ -0.6
CFHR1-201ENST00000320493 MKRN3Q13064 507 aaKnown RBP11.32□□□□□ -0.6
CFHR1-201ENST00000320493 HOXB1P14653 301 aaPredicted RBP11.29□□□□□ -0.6
CFHR1-201ENST00000320493 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.29□□□□□ -0.6
CFHR1-201ENST00000320493 GOLGA2Q08379 1002 aa11.28□□□□□ -0.6
CFHR1-201ENST00000320493 RNF166Q96A37 237 aaPredicted RBP11.28□□□□□ -0.6
CFHR1-201ENST00000320493 ZNF467Q7Z7K2 595 aaPredicted RBP11.27□□□□□ -0.61
CFHR1-201ENST00000320493 SLC24A1O60721 1099 aa11.25□□□□□ -0.61
CFHR1-201ENST00000320493 IFNLR1Q8IU57 520 aaPredicted RBP11.24□□□□□ -0.61
CFHR1-201ENST00000320493 ERBB3P21860 1342 aa11.21□□□□□ -0.61
CFHR1-201ENST00000320493 CHRM1P11229 460 aaPredicted RBP11.21□□□□□ -0.61
CFHR1-201ENST00000320493 DPY19L2Q6NUT2 758 aa11.2□□□□□ -0.62
CFHR1-201ENST00000320493 MYT1LQ9UL68 1186 aa11.2□□□□□ -0.62
CFHR1-201ENST00000320493 PSEN1P49768 467 aa11.18□□□□□ -0.62
CFHR1-201ENST00000320493 KLHL34Q8N239 644 aa11.18□□□□□ -0.62
CFHR1-201ENST00000320493 DOK7Q18PE1 504 aa11.17□□□□□ -0.62
CFHR1-201ENST00000320493 ZNF710Q8N1W2 664 aa11.17□□□□□ -0.62
CFHR1-201ENST00000320493 GSE1Q14687 1217 aa11.16□□□□□ -0.62
CFHR1-201ENST00000320493 BOLA1Q9Y3E2 137 aa11.16□□□□□ -0.62
CFHR1-201ENST00000320493 VARS2Q5ST30 1063 aaKnown RBP11.11□□□□□ -0.63
CFHR1-201ENST00000320493 ZNF687Q8N1G0 1237 aa11.11□□□□□ -0.63
CFHR1-201ENST00000320493 PTGER2P43116 358 aa11.1□□□□□ -0.63
CFHR1-201ENST00000320493 G3V3G9 751 aa11.09□□□□□ -0.63
CFHR1-201ENST00000320493 SPOCK2Q92563 424 aa11.08□□□□□ -0.64
CFHR1-201ENST00000320493 PDAP1Q13442 181 aaKnown RBP11.07□□□□□ -0.64
CFHR1-201ENST00000320493 RIMBP2O15034 1052 aa11.06□□□□□ -0.64
CFHR1-201ENST00000320493 ZSWIM6Q9HCJ5 1215 aa11.06□□□□□ -0.64
CFHR1-201ENST00000320493 CABP2Q9NPB3 220 aa11.02□□□□□ -0.65
CFHR1-201ENST00000320493 GPR153Q6NV75 609 aa11.01□□□□□ -0.65
CFHR1-201ENST00000320493 CIZ1Q9ULV3 898 aaPredicted RBP10.95□□□□□ -0.66
CFHR1-201ENST00000320493 TMEM92Q6UXU6 159 aa10.94□□□□□ -0.66
CFHR1-201ENST00000320493 ANKRD13DQ6ZTN6 518 aa10.91□□□□□ -0.66
CFHR1-201ENST00000320493 LSM11P83369 360 aaKnown RBP eCLIP10.87□□□□□ -0.67
CFHR1-201ENST00000320493 MICALL2Q8IY33 904 aa10.87□□□□□ -0.67
CFHR1-201ENST00000320493 PLA2G2EQ9NZK7 142 aa10.85□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms