RNA–Protein interactions for RNA: ENST00000315563.10

RRP12-201, Transcript of ribosomal RNA processing 12 homolog, humanhuman

TSL 1 (best) BASIC

Gene RRP12, Length 4,038 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RRP12-201ENST00000315563 CUX2O14529 1486 aa13.78□□□□□ -0.2
RRP12-201ENST00000315563 CCNB3Q8WWL7 1395 aa13.78□□□□□ -0.2
RRP12-201ENST00000315563 CARMIL1Q5VZK9 1371 aa13.77□□□□□ -0.21
RRP12-201ENST00000315563 VPS8Q8N3P4 1428 aa13.77□□□□□ -0.21
RRP12-201ENST00000315563 CHGAP10645 457 aaKnown RBP13.76□□□□□ -0.21
RRP12-201ENST00000315563 RGL3Q3MIN7 710 aa13.76□□□□□ -0.21
RRP12-201ENST00000315563 NPM2Q86SE8 214 aaKnown RBP13.75□□□□□ -0.21
RRP12-201ENST00000315563 KCNH8Q96L42 1107 aa13.75□□□□□ -0.21
RRP12-201ENST00000315563 RAPGEF2Q9Y4G8 1499 aa13.74□□□□□ -0.21
RRP12-201ENST00000315563 FOXD1Q16676 465 aa13.74□□□□□ -0.21
RRP12-201ENST00000315563 TSPY4P0CV99 314 aa13.74□□□□□ -0.21
RRP12-201ENST00000315563 TSPY10P0CW01 314 aa13.74□□□□□ -0.21
RRP12-201ENST00000315563 EIF4G2P78344 907 aaKnown RBP eCLIP13.74□□□□□ -0.21
RRP12-201ENST00000315563 TMC1Q8TDI8 760 aa13.73□□□□□ -0.21
RRP12-201ENST00000315563 RTL5Q5HYW3 569 aaPredicted RBP13.72□□□□□ -0.21
RRP12-201ENST00000315563 TDRD9Q8NDG6 1382 aaKnown RBP13.7□□□□□ -0.22
RRP12-201ENST00000315563 SUPT16HQ9Y5B9 1047 aaKnown RBP13.69□□□□□ -0.22
RRP12-201ENST00000315563 TOP2AP11388 1531 aaKnown RBP13.68□□□□□ -0.22
RRP12-201ENST00000315563 CFDP1Q9UEE9 299 aaPredicted RBP13.68□□□□□ -0.22
RRP12-201ENST00000315563 RAB3GAP2Q9H2M9 1393 aa13.64□□□□□ -0.23
RRP12-201ENST00000315563 CANXP27824 592 aaKnown RBP13.63□□□□□ -0.23
RRP12-201ENST00000315563 PLEKHD1A6NEE1 506 aa13.63□□□□□ -0.23
RRP12-201ENST00000315563 ATAD2BQ9ULI0 1458 aa13.63□□□□□ -0.23
RRP12-201ENST00000315563 PLPPR3Q6T4P5 718 aa13.62□□□□□ -0.23
RRP12-201ENST00000315563 CCDC136Q96JN2 1154 aa13.62□□□□□ -0.23
RRP12-201ENST00000315563 SMARCA4P51532 1647 aa13.59□□□□□ -0.23
RRP12-201ENST00000315563 EIF4G1Q04637 1599 aaKnown RBP13.57□□□□□ -0.24
RRP12-201ENST00000315563 NBR1Q14596 966 aa13.57□□□□□ -0.24
RRP12-201ENST00000315563 FHOD3Q2V2M9 1422 aa13.56□□□□□ -0.24
RRP12-201ENST00000315563 SETD5Q9C0A6 1442 aa13.56□□□□□ -0.24
RRP12-201ENST00000315563 SLC24A1O60721 1099 aa13.55□□□□□ -0.24
RRP12-201ENST00000315563 ANP32AP39687 249 aaKnown RBP13.55□□□□□ -0.24
RRP12-201ENST00000315563 CARD11Q9BXL7 1154 aa13.55□□□□□ -0.24
RRP12-201ENST00000315563 FHAD1B1AJZ9 1412 aa13.55□□□□□ -0.24
RRP12-201ENST00000315563 SMARCA2P51531 1590 aa13.53□□□□□ -0.24
RRP12-201ENST00000315563 DHX57Q6P158 1386 aaKnown RBP13.52□□□□□ -0.24
RRP12-201ENST00000315563 HSPA5P11021 654 aaKnown RBP13.52□□□□□ -0.24
RRP12-201ENST00000315563 B4GALNT3Q6L9W6 998 aa13.51□□□□□ -0.25
RRP12-201ENST00000315563 PPP1R15AO75807 674 aaPredicted RBP13.5□□□□□ -0.25
RRP12-201ENST00000315563 CADPSQ9ULU8 1353 aa13.5□□□□□ -0.25
RRP12-201ENST00000315563 DCAF11Q8TEB1 546 aa13.49□□□□□ -0.25
RRP12-201ENST00000315563 NPM1P06748 294 aaKnown RBP eCLIP13.48□□□□□ -0.25
RRP12-201ENST00000315563 STAG3Q9UJ98 1225 aa13.48□□□□□ -0.25
RRP12-201ENST00000315563 WDR43Q15061 677 aaKnown RBP eCLIP13.46□□□□□ -0.25
RRP12-201ENST00000315563 ARHGAP35Q9NRY4 1499 aa13.46□□□□□ -0.25
RRP12-201ENST00000315563 CC2D1BQ5T0F9 858 aaKnown RBP13.46□□□□□ -0.26
RRP12-201ENST00000315563 MPHOSPH9Q99550 1183 aa13.46□□□□□ -0.26
RRP12-201ENST00000315563 L3MBTL2Q969R5 705 aa13.45□□□□□ -0.26
RRP12-201ENST00000315563 PKD2Q13563 968 aa13.45□□□□□ -0.26
RRP12-201ENST00000315563 NEUROD2Q15784 382 aa13.43□□□□□ -0.26
RRP12-201ENST00000315563 TNNT2P45379 298 aaPredicted RBP13.42□□□□□ -0.26
RRP12-201ENST00000315563 IGF1RP08069 1367 aa13.42□□□□□ -0.26
RRP12-201ENST00000315563 ERCC6Q03468 1493 aa13.41□□□□□ -0.26
RRP12-201ENST00000315563 NEFMP07197 916 aa13.39□□□□□ -0.27
RRP12-201ENST00000315563 ZBTB47Q9UFB7 747 aaPredicted RBP13.38□□□□□ -0.27
RRP12-201ENST00000315563 PLEKHG5O94827 1062 aa13.38□□□□□ -0.27
RRP12-201ENST00000315563 TIMELESSQ9UNS1 1208 aa13.37□□□□□ -0.27
RRP12-201ENST00000315563 RAD54L2Q9Y4B4 1467 aa13.37□□□□□ -0.27
RRP12-201ENST00000315563 ARXQ96QS3 562 aa13.37□□□□□ -0.27
RRP12-201ENST00000315563 ESF1Q9H501 851 aaKnown RBP13.36□□□□□ -0.27
RRP12-201ENST00000315563 HNRNPMP52272 730 aaKnown RBP eCLIP13.35□□□□□ -0.27
RRP12-201ENST00000315563 KNSTRNQ9Y448 316 aa13.35□□□□□ -0.27
RRP12-201ENST00000315563 FMN1Q68DA7 1419 aa13.35□□□□□ -0.27
RRP12-201ENST00000315563 PHLDB1Q86UU1 1377 aa13.34□□□□□ -0.27
RRP12-201ENST00000315563 CCER2I3L3R5 266 aa13.34□□□□□ -0.27
RRP12-201ENST00000315563 KIF21BO75037 1637 aa13.33□□□□□ -0.27
RRP12-201ENST00000315563 RBM19Q9Y4C8 960 aaKnown RBP13.33□□□□□ -0.28
RRP12-201ENST00000315563 ZNF644Q9H582 1327 aaPredicted RBP13.33□□□□□ -0.28
RRP12-201ENST00000315563 SYNJ1O43426 1573 aa13.33□□□□□ -0.28
RRP12-201ENST00000315563 ARAP1Q96P48 1450 aa13.33□□□□□ -0.28
RRP12-201ENST00000315563 TSHZ2Q9NRE2 1034 aa13.32□□□□□ -0.28
RRP12-201ENST00000315563 PPM1GO15355 546 aaPredicted RBP13.32□□□□□ -0.28
RRP12-201ENST00000315563 FANCD2Q9BXW9 1451 aa13.32□□□□□ -0.28
RRP12-201ENST00000315563 NUP155O75694 1391 aa13.32□□□□□ -0.28
RRP12-201ENST00000315563 PPP4R2Q9NY27 417 aa13.32□□□□□ -0.28
RRP12-201ENST00000315563 PDS5BQ9NTI5 1447 aa13.31□□□□□ -0.28
RRP12-201ENST00000315563 SAFB2Q14151 953 aaKnown RBP eCLIP13.31□□□□□ -0.28
RRP12-201ENST00000315563 FGD5Q6ZNL6 1462 aa13.3□□□□□ -0.28
RRP12-201ENST00000315563 ANP32EQ9BTT0 268 aa13.3□□□□□ -0.28
RRP12-201ENST00000315563 RGS3P49796 1198 aa13.28□□□□□ -0.28
RRP12-201ENST00000315563 DNAJC5BQ9UF47 199 aa13.28□□□□□ -0.28
RRP12-201ENST00000315563 JPH4Q96JJ6 628 aa13.28□□□□□ -0.28
RRP12-201ENST00000315563 GOLGA6L2Q8N9W4 650 aaPredicted RBP13.27□□□□□ -0.29
RRP12-201ENST00000315563 GGT6Q6P531 493 aa13.25□□□□□ -0.29
RRP12-201ENST00000315563 FRAT1Q92837 279 aaPredicted RBP13.25□□□□□ -0.29
RRP12-201ENST00000315563 LAS1LQ9Y4W2 734 aaKnown RBP13.25□□□□□ -0.29
RRP12-201ENST00000315563 ST20-MTHFSA0A0A6YYL1 179 aa13.24□□□□□ -0.29
RRP12-201ENST00000315563 HSP90AA1P07900 732 aaKnown RBP13.21□□□□□ -0.29
RRP12-201ENST00000315563 TMF1P82094 1093 aa13.21□□□□□ -0.3
RRP12-201ENST00000315563 NUTM2DQ5VT03 806 aaPredicted RBP13.21□□□□□ -0.3
RRP12-201ENST00000315563 NESP48681 1621 aa13.2□□□□□ -0.3
RRP12-201ENST00000315563 MLECQ14165 292 aa13.19□□□□□ -0.3
RRP12-201ENST00000315563 PRKRIP1Q9H875 184 aaPredicted RBP13.19□□□□□ -0.3
RRP12-201ENST00000315563 UPF2Q9HAU5 1272 aaKnown RBP13.19□□□□□ -0.3
RRP12-201ENST00000315563 NCAPD3P42695 1498 aa13.19□□□□□ -0.3
RRP12-201ENST00000315563 CCDC18Q5T9S5 1454 aa13.19□□□□□ -0.3
RRP12-201ENST00000315563 ROCK2O75116 1388 aaKnown RBP13.19□□□□□ -0.3
RRP12-201ENST00000315563 AQRO60306 1485 aaKnown RBP eCLIP13.18□□□□□ -0.31e-7■■■■■ 73.1
RRP12-201ENST00000315563 STK26Q9P289 416 aa13.18□□□□□ -0.3
RRP12-201ENST00000315563 U2SURPO15042 1029 aaKnown RBP13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 71.3 ms