RNA–Protein interactions for RNA: ENST00000315563.10

RRP12-201, Transcript of ribosomal RNA processing 12 homolog, humanhuman

TSL 1 (best) BASIC

Gene RRP12, Length 4,038 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RRP12-201ENST00000315563 CUX2O14529 1486 aa13.78□□□□□ -0.2
RRP12-201ENST00000315563 CCNB3Q8WWL7 1395 aa13.78□□□□□ -0.2
RRP12-201ENST00000315563 CARMIL1Q5VZK9 1371 aa13.77□□□□□ -0.21
RRP12-201ENST00000315563 VPS8Q8N3P4 1428 aa13.77□□□□□ -0.21
RRP12-201ENST00000315563 CHGAP10645 457 aaKnown RBP13.76□□□□□ -0.21
RRP12-201ENST00000315563 RGL3Q3MIN7 710 aa13.76□□□□□ -0.21
RRP12-201ENST00000315563 NPM2Q86SE8 214 aaKnown RBP13.75□□□□□ -0.21
RRP12-201ENST00000315563 KCNH8Q96L42 1107 aa13.75□□□□□ -0.21
RRP12-201ENST00000315563 RAPGEF2Q9Y4G8 1499 aa13.74□□□□□ -0.21
RRP12-201ENST00000315563 FOXD1Q16676 465 aa13.74□□□□□ -0.21
RRP12-201ENST00000315563 TSPY4P0CV99 314 aa13.74□□□□□ -0.21
RRP12-201ENST00000315563 TSPY10P0CW01 314 aa13.74□□□□□ -0.21
RRP12-201ENST00000315563 EIF4G2P78344 907 aaKnown RBP eCLIP13.74□□□□□ -0.21
RRP12-201ENST00000315563 TMC1Q8TDI8 760 aa13.73□□□□□ -0.21
RRP12-201ENST00000315563 RTL5Q5HYW3 569 aaPredicted RBP13.72□□□□□ -0.21
RRP12-201ENST00000315563 TDRD9Q8NDG6 1382 aaKnown RBP13.7□□□□□ -0.22
RRP12-201ENST00000315563 SUPT16HQ9Y5B9 1047 aaKnown RBP13.69□□□□□ -0.22
RRP12-201ENST00000315563 TOP2AP11388 1531 aaKnown RBP13.68□□□□□ -0.22
RRP12-201ENST00000315563 CFDP1Q9UEE9 299 aaPredicted RBP13.68□□□□□ -0.22
RRP12-201ENST00000315563 RAB3GAP2Q9H2M9 1393 aa13.64□□□□□ -0.23
RRP12-201ENST00000315563 CANXP27824 592 aaKnown RBP13.63□□□□□ -0.23
RRP12-201ENST00000315563 PLEKHD1A6NEE1 506 aa13.63□□□□□ -0.23
RRP12-201ENST00000315563 ATAD2BQ9ULI0 1458 aa13.63□□□□□ -0.23
RRP12-201ENST00000315563 PLPPR3Q6T4P5 718 aa13.62□□□□□ -0.23
RRP12-201ENST00000315563 CCDC136Q96JN2 1154 aa13.62□□□□□ -0.23
RRP12-201ENST00000315563 SMARCA4P51532 1647 aa13.59□□□□□ -0.23
RRP12-201ENST00000315563 EIF4G1Q04637 1599 aaKnown RBP13.57□□□□□ -0.24
RRP12-201ENST00000315563 NBR1Q14596 966 aa13.57□□□□□ -0.24
RRP12-201ENST00000315563 FHOD3Q2V2M9 1422 aa13.56□□□□□ -0.24
RRP12-201ENST00000315563 SETD5Q9C0A6 1442 aa13.56□□□□□ -0.24
RRP12-201ENST00000315563 SLC24A1O60721 1099 aa13.55□□□□□ -0.24
RRP12-201ENST00000315563 ANP32AP39687 249 aaKnown RBP13.55□□□□□ -0.24
RRP12-201ENST00000315563 CARD11Q9BXL7 1154 aa13.55□□□□□ -0.24
RRP12-201ENST00000315563 FHAD1B1AJZ9 1412 aa13.55□□□□□ -0.24
RRP12-201ENST00000315563 SMARCA2P51531 1590 aa13.53□□□□□ -0.24
RRP12-201ENST00000315563 DHX57Q6P158 1386 aaKnown RBP13.52□□□□□ -0.24
RRP12-201ENST00000315563 HSPA5P11021 654 aaKnown RBP13.52□□□□□ -0.24
RRP12-201ENST00000315563 B4GALNT3Q6L9W6 998 aa13.51□□□□□ -0.25
RRP12-201ENST00000315563 PPP1R15AO75807 674 aaPredicted RBP13.5□□□□□ -0.25
RRP12-201ENST00000315563 CADPSQ9ULU8 1353 aa13.5□□□□□ -0.25
RRP12-201ENST00000315563 DCAF11Q8TEB1 546 aa13.49□□□□□ -0.25
RRP12-201ENST00000315563 NPM1P06748 294 aaKnown RBP eCLIP13.48□□□□□ -0.25
RRP12-201ENST00000315563 STAG3Q9UJ98 1225 aa13.48□□□□□ -0.25
RRP12-201ENST00000315563 WDR43Q15061 677 aaKnown RBP eCLIP13.46□□□□□ -0.25
RRP12-201ENST00000315563 ARHGAP35Q9NRY4 1499 aa13.46□□□□□ -0.25
RRP12-201ENST00000315563 CC2D1BQ5T0F9 858 aaKnown RBP13.46□□□□□ -0.26
RRP12-201ENST00000315563 MPHOSPH9Q99550 1183 aa13.46□□□□□ -0.26
RRP12-201ENST00000315563 L3MBTL2Q969R5 705 aa13.45□□□□□ -0.26
RRP12-201ENST00000315563 PKD2Q13563 968 aa13.45□□□□□ -0.26
RRP12-201ENST00000315563 NEUROD2Q15784 382 aa13.43□□□□□ -0.26
RRP12-201ENST00000315563 TNNT2P45379 298 aaPredicted RBP13.42□□□□□ -0.26
RRP12-201ENST00000315563 IGF1RP08069 1367 aa13.42□□□□□ -0.26
RRP12-201ENST00000315563 ERCC6Q03468 1493 aa13.41□□□□□ -0.26
RRP12-201ENST00000315563 NEFMP07197 916 aa13.39□□□□□ -0.27
RRP12-201ENST00000315563 ZBTB47Q9UFB7 747 aaPredicted RBP13.38□□□□□ -0.27
RRP12-201ENST00000315563 PLEKHG5O94827 1062 aa13.38□□□□□ -0.27
RRP12-201ENST00000315563 TIMELESSQ9UNS1 1208 aa13.37□□□□□ -0.27
RRP12-201ENST00000315563 RAD54L2Q9Y4B4 1467 aa13.37□□□□□ -0.27
RRP12-201ENST00000315563 ARXQ96QS3 562 aa13.37□□□□□ -0.27
RRP12-201ENST00000315563 ESF1Q9H501 851 aaKnown RBP13.36□□□□□ -0.27
RRP12-201ENST00000315563 HNRNPMP52272 730 aaKnown RBP eCLIP13.35□□□□□ -0.27
RRP12-201ENST00000315563 KNSTRNQ9Y448 316 aa13.35□□□□□ -0.27
RRP12-201ENST00000315563 FMN1Q68DA7 1419 aa13.35□□□□□ -0.27
RRP12-201ENST00000315563 PHLDB1Q86UU1 1377 aa13.34□□□□□ -0.27
RRP12-201ENST00000315563 CCER2I3L3R5 266 aa13.34□□□□□ -0.27
RRP12-201ENST00000315563 KIF21BO75037 1637 aa13.33□□□□□ -0.27
RRP12-201ENST00000315563 RBM19Q9Y4C8 960 aaKnown RBP13.33□□□□□ -0.28
RRP12-201ENST00000315563 ZNF644Q9H582 1327 aaPredicted RBP13.33□□□□□ -0.28
RRP12-201ENST00000315563 SYNJ1O43426 1573 aa13.33□□□□□ -0.28
RRP12-201ENST00000315563 ARAP1Q96P48 1450 aa13.33□□□□□ -0.28
RRP12-201ENST00000315563 TSHZ2Q9NRE2 1034 aa13.32□□□□□ -0.28
RRP12-201ENST00000315563 PPM1GO15355 546 aaPredicted RBP13.32□□□□□ -0.28
RRP12-201ENST00000315563 FANCD2Q9BXW9 1451 aa13.32□□□□□ -0.28
RRP12-201ENST00000315563 NUP155O75694 1391 aa13.32□□□□□ -0.28
RRP12-201ENST00000315563 PPP4R2Q9NY27 417 aa13.32□□□□□ -0.28
RRP12-201ENST00000315563 PDS5BQ9NTI5 1447 aa13.31□□□□□ -0.28
RRP12-201ENST00000315563 SAFB2Q14151 953 aaKnown RBP eCLIP13.31□□□□□ -0.28
RRP12-201ENST00000315563 FGD5Q6ZNL6 1462 aa13.3□□□□□ -0.28
RRP12-201ENST00000315563 ANP32EQ9BTT0 268 aa13.3□□□□□ -0.28
RRP12-201ENST00000315563 RGS3P49796 1198 aa13.28□□□□□ -0.28
RRP12-201ENST00000315563 DNAJC5BQ9UF47 199 aa13.28□□□□□ -0.28
RRP12-201ENST00000315563 JPH4Q96JJ6 628 aa13.28□□□□□ -0.28
RRP12-201ENST00000315563 GOLGA6L2Q8N9W4 650 aaPredicted RBP13.27□□□□□ -0.29
RRP12-201ENST00000315563 GGT6Q6P531 493 aa13.25□□□□□ -0.29
RRP12-201ENST00000315563 FRAT1Q92837 279 aaPredicted RBP13.25□□□□□ -0.29
RRP12-201ENST00000315563 LAS1LQ9Y4W2 734 aaKnown RBP13.25□□□□□ -0.29
RRP12-201ENST00000315563 ST20-MTHFSA0A0A6YYL1 179 aa13.24□□□□□ -0.29
RRP12-201ENST00000315563 HSP90AA1P07900 732 aaKnown RBP13.21□□□□□ -0.29
RRP12-201ENST00000315563 TMF1P82094 1093 aa13.21□□□□□ -0.3
RRP12-201ENST00000315563 NUTM2DQ5VT03 806 aaPredicted RBP13.21□□□□□ -0.3
RRP12-201ENST00000315563 NESP48681 1621 aa13.2□□□□□ -0.3
RRP12-201ENST00000315563 MLECQ14165 292 aa13.19□□□□□ -0.3
RRP12-201ENST00000315563 PRKRIP1Q9H875 184 aaPredicted RBP13.19□□□□□ -0.3
RRP12-201ENST00000315563 UPF2Q9HAU5 1272 aaKnown RBP13.19□□□□□ -0.3
RRP12-201ENST00000315563 NCAPD3P42695 1498 aa13.19□□□□□ -0.3
RRP12-201ENST00000315563 CCDC18Q5T9S5 1454 aa13.19□□□□□ -0.3
RRP12-201ENST00000315563 ROCK2O75116 1388 aaKnown RBP13.19□□□□□ -0.3
RRP12-201ENST00000315563 AQRO60306 1485 aaKnown RBP eCLIP13.18□□□□□ -0.31e-7■■■■■ 73.1
RRP12-201ENST00000315563 STK26Q9P289 416 aa13.18□□□□□ -0.3
RRP12-201ENST00000315563 U2SURPO15042 1029 aaKnown RBP13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms