RNA–Protein interactions for RNA: ENST00000315251.10

CHDH-201, Transcript of choline dehydrogenase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHDH, Length 7,665 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHDH-201ENST00000315251 HIRIP3Q9BW71 556 aaPredicted RBP19.93■□□□□ 0.78
CHDH-201ENST00000315251 DNTTIP2Q5QJE6 756 aaKnown RBP19.93■□□□□ 0.78
CHDH-201ENST00000315251 PTMAP06454 111 aaKnown RBP19.92■□□□□ 0.78
CHDH-201ENST00000315251 ZRSR1Q15695 479 aaKnown RBP19.92■□□□□ 0.78
CHDH-201ENST00000315251 SENP3-EIF4A1A0A087X0R7 540 aa19.92■□□□□ 0.78
CHDH-201ENST00000315251 BECN1Q14457 450 aa19.9■□□□□ 0.78
CHDH-201ENST00000315251 TNNT2P45379 298 aaPredicted RBP19.88■□□□□ 0.77
CHDH-201ENST00000315251 CSRNP3Q8WYN3 585 aa19.88■□□□□ 0.77
CHDH-201ENST00000315251 GOLGA6L22H0YM25 854 aa19.87■□□□□ 0.77
CHDH-201ENST00000315251 NCBP3Q53F19 620 aaKnown RBP19.83■□□□□ 0.77
CHDH-201ENST00000315251 DDRGK1Q96HY6 314 aa19.82■□□□□ 0.76
CHDH-201ENST00000315251 HAP1P54257 671 aaPredicted RBP19.8■□□□□ 0.76
CHDH-201ENST00000315251 PLCB2Q00722 1185 aa19.79■□□□□ 0.76
CHDH-201ENST00000315251 PPM1GO15355 546 aaPredicted RBP19.78■□□□□ 0.76
CHDH-201ENST00000315251 PPP1R15AO75807 674 aaPredicted RBP19.75■□□□□ 0.75
CHDH-201ENST00000315251 RTN4Q9NQC3 1192 aaKnown RBP19.75■□□□□ 0.75
CHDH-201ENST00000315251 CASC1Q6TDU7 716 aa19.74■□□□□ 0.75
CHDH-201ENST00000315251 NAP1L5Q96NT1 182 aaPredicted RBP19.73■□□□□ 0.75
CHDH-201ENST00000315251 ANP32EQ9BTT0 268 aa19.73■□□□□ 0.75
CHDH-201ENST00000315251 LAS1LQ9Y4W2 734 aaKnown RBP19.73■□□□□ 0.75
CHDH-201ENST00000315251 TSPY4P0CV99 314 aa19.72■□□□□ 0.75
CHDH-201ENST00000315251 TSPY10P0CW01 314 aa19.72■□□□□ 0.75
CHDH-201ENST00000315251 NPHP1O15259 732 aa19.71■□□□□ 0.75
CHDH-201ENST00000315251 FTSJ3Q8IY81 847 aaKnown RBP19.71■□□□□ 0.75
CHDH-201ENST00000315251 MIER1Q8N108 512 aa19.69■□□□□ 0.74
CHDH-201ENST00000315251 NAP1L2Q9ULW6 460 aaPredicted RBP19.66■□□□□ 0.74
CHDH-201ENST00000315251 AMER1Q5JTC6 1135 aaPredicted RBP19.66■□□□□ 0.74
CHDH-201ENST00000315251 NEUROD2Q15784 382 aa19.65■□□□□ 0.74
CHDH-201ENST00000315251 RGL3Q3MIN7 710 aa19.64■□□□□ 0.73
CHDH-201ENST00000315251 EIF4G2P78344 907 aaKnown RBP eCLIP19.62■□□□□ 0.73
CHDH-201ENST00000315251 FGD1P98174 961 aa19.62■□□□□ 0.73
CHDH-201ENST00000315251 CLSTN1O94985 981 aa19.61■□□□□ 0.73
CHDH-201ENST00000315251 LMOD2Q6P5Q4 547 aa19.61■□□□□ 0.73
CHDH-201ENST00000315251 RRP7BPQ9NSQ0 103 aa19.6■□□□□ 0.73
CHDH-201ENST00000315251 RGS3P49796 1198 aa19.58■□□□□ 0.72
CHDH-201ENST00000315251 CFAP53Q96M91 514 aa19.58■□□□□ 0.72
CHDH-201ENST00000315251 OS9Q13438 667 aaPredicted RBP19.57■□□□□ 0.72
CHDH-201ENST00000315251 KCNH8Q96L42 1107 aa19.57■□□□□ 0.72
CHDH-201ENST00000315251 MTUS2Q5JR59 1369 aa19.56■□□□□ 0.72
CHDH-201ENST00000315251 ERICH6BQ5W0A0 696 aa19.56■□□□□ 0.72
CHDH-201ENST00000315251 ARID4BQ4LE39 1312 aaPredicted RBP19.55■□□□□ 0.72
CHDH-201ENST00000315251 GOLGA6L6A8MZA4 724 aa19.55■□□□□ 0.72
CHDH-201ENST00000315251 HSP90AB1P08238 724 aaKnown RBP19.55■□□□□ 0.72
CHDH-201ENST00000315251 SUPT16HQ9Y5B9 1047 aaKnown RBP19.55■□□□□ 0.72
CHDH-201ENST00000315251 KCNJ4P48050 445 aa19.55■□□□□ 0.72
CHDH-201ENST00000315251 FRAT1Q92837 279 aaPredicted RBP19.54■□□□□ 0.72
CHDH-201ENST00000315251 KNSTRNQ9Y448 316 aa19.53■□□□□ 0.72
CHDH-201ENST00000315251 GOLGA2Q08379 1002 aa19.53■□□□□ 0.72
CHDH-201ENST00000315251 MAPK8IP3Q9UPT6 1336 aa19.49■□□□□ 0.71
CHDH-201ENST00000315251 CHMP7Q8WUX9 453 aaPredicted RBP19.46■□□□□ 0.71
CHDH-201ENST00000315251 ISY1Q9ULR0 285 aaKnown RBP19.46■□□□□ 0.71
CHDH-201ENST00000315251 GOLGA6L4A6NEF3 574 aa19.45■□□□□ 0.7
CHDH-201ENST00000315251 NRDCO43847 1150 aa19.45■□□□□ 0.7
CHDH-201ENST00000315251 SPRYD3Q8NCJ5 442 aa19.45■□□□□ 0.7
CHDH-201ENST00000315251 DRC7Q8IY82 874 aa19.44■□□□□ 0.7
CHDH-201ENST00000315251 CHAF1AQ13111 956 aaPredicted RBP19.42■□□□□ 0.7
CHDH-201ENST00000315251 U2SURPO15042 1029 aaKnown RBP19.4■□□□□ 0.7
CHDH-201ENST00000315251 CC2D1BQ5T0F9 858 aaKnown RBP19.38■□□□□ 0.69
CHDH-201ENST00000315251 POGKQ9P215 609 aa19.37■□□□□ 0.69
CHDH-201ENST00000315251 SOX12O15370 315 aa19.37■□□□□ 0.69
CHDH-201ENST00000315251 NOP58Q9Y2X3 529 aaKnown RBP19.37■□□□□ 0.69
CHDH-201ENST00000315251 CARD11Q9BXL7 1154 aa19.37■□□□□ 0.69
CHDH-201ENST00000315251 MSNP26038 577 aaKnown RBP19.36■□□□□ 0.69
CHDH-201ENST00000315251 NUDCQ9Y266 331 aa19.36■□□□□ 0.69
CHDH-201ENST00000315251 CDCA8Q53HL2 280 aa19.36■□□□□ 0.69
CHDH-201ENST00000315251 ARID3AQ99856 593 aa19.35■□□□□ 0.69
CHDH-201ENST00000315251 SCRIBQ14160 1630 aa19.35■□□□□ 0.69
CHDH-201ENST00000315251 HSCBQ8IWL3 235 aa19.33■□□□□ 0.68
CHDH-201ENST00000315251 GNL2Q13823 731 aaKnown RBP19.31■□□□□ 0.68
CHDH-201ENST00000315251 B4GALNT3Q6L9W6 998 aa19.31■□□□□ 0.68
CHDH-201ENST00000315251 PRM3Q9NNZ6 103 aa19.3■□□□□ 0.68
CHDH-201ENST00000315251 PNNQ9H307 717 aaKnown RBP19.29■□□□□ 0.68
CHDH-201ENST00000315251 NOC3LQ8WTT2 800 aaKnown RBP19.28■□□□□ 0.68
CHDH-201ENST00000315251 DCAF1Q9Y4B6 1507 aa19.27■□□□□ 0.67
CHDH-201ENST00000315251 APBB1O00213 710 aa19.26■□□□□ 0.67
CHDH-201ENST00000315251 PDE4CQ08493 712 aa19.26■□□□□ 0.67
CHDH-201ENST00000315251 PPP4R2Q9NY27 417 aa19.26■□□□□ 0.67
CHDH-201ENST00000315251 PLEKHD1A6NEE1 506 aa19.25■□□□□ 0.67
CHDH-201ENST00000315251 CHMP4BQ9H444 224 aaKnown RBP19.25■□□□□ 0.67
CHDH-201ENST00000315251 MCCP23508 829 aa19.24■□□□□ 0.67
CHDH-201ENST00000315251 KIAA2012Q0VF49 1180 aa19.24■□□□□ 0.67
CHDH-201ENST00000315251 L1TD1Q5T7N2 865 aaKnown RBP19.21■□□□□ 0.67
CHDH-201ENST00000315251 MS4A1P11836 297 aa19.2■□□□□ 0.66
CHDH-201ENST00000315251 CLIP1P30622 1438 aa19.18■□□□□ 0.66
CHDH-201ENST00000315251 GZF1Q9H116 711 aaPredicted RBP19.18■□□□□ 0.66
CHDH-201ENST00000315251 ZCCHC6Q5VYS8 1495 aaKnown RBP19.17■□□□□ 0.66
CHDH-201ENST00000315251 CFDP1Q9UEE9 299 aaPredicted RBP19.17■□□□□ 0.66
CHDH-201ENST00000315251 ZNF330Q9Y3S2 320 aaPredicted RBP19.17■□□□□ 0.66
CHDH-201ENST00000315251 SAFB2Q14151 953 aaKnown RBP eCLIP19.16■□□□□ 0.66
CHDH-201ENST00000315251 DEKP35659 375 aaKnown RBP19.14■□□□□ 0.65
CHDH-201ENST00000315251 KIAA1211Q6ZU35 1233 aa19.14■□□□□ 0.65
CHDH-201ENST00000315251 ANO8Q9HCE9 1232 aaPredicted RBP19.14■□□□□ 0.65
CHDH-201ENST00000315251 RSF1Q96T23 1441 aaPredicted RBP19.13■□□□□ 0.65
CHDH-201ENST00000315251 SRPK2P78362 688 aaKnown RBP19.13■□□□□ 0.65
CHDH-201ENST00000315251 RTF1Q92541 710 aaKnown RBP19.11■□□□□ 0.65
CHDH-201ENST00000315251 A0A0U1RQG5 324 aaPredicted RBP19.11■□□□□ 0.65
CHDH-201ENST00000315251 MLECQ14165 292 aa19.1■□□□□ 0.65
CHDH-201ENST00000315251 SIN3AQ96ST3 1273 aa19.1■□□□□ 0.65
CHDH-201ENST00000315251 CREBRFQ8IUR6 639 aa19.08■□□□□ 0.65
CHDH-201ENST00000315251 HSP90B1P14625 803 aaKnown RBP19.07■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms