RNA–Protein interactions for RNA: ENST00000311601.5

SH3PXD2B-201, Transcript of SH3 and PX domains 2B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SH3PXD2B, Length 7,777 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3PXD2B-201ENST00000311601 HNRNPUQ00839 825 aaKnown RBP eCLIP18.15■□□□□ 0.5
SH3PXD2B-201ENST00000311601 MLECQ14165 292 aa18.13■□□□□ 0.49
SH3PXD2B-201ENST00000311601 HIRIP3Q9BW71 556 aaPredicted RBP18.11■□□□□ 0.49
SH3PXD2B-201ENST00000311601 CFDP1Q9UEE9 299 aaPredicted RBP18.11■□□□□ 0.49
SH3PXD2B-201ENST00000311601 PPM1GO15355 546 aaPredicted RBP18.09■□□□□ 0.49
SH3PXD2B-201ENST00000311601 NACADO15069 1562 aa18.08■□□□□ 0.49
SH3PXD2B-201ENST00000311601 CLIP1P30622 1438 aa18.07■□□□□ 0.48
SH3PXD2B-201ENST00000311601 RSF1Q96T23 1441 aaPredicted RBP18.05■□□□□ 0.48
SH3PXD2B-201ENST00000311601 ANP32AP39687 249 aaKnown RBP18.05■□□□□ 0.48
SH3PXD2B-201ENST00000311601 UPF2Q9HAU5 1272 aaKnown RBP18.02■□□□□ 0.48
SH3PXD2B-201ENST00000311601 GOLGA6L2Q8N9W4 650 aaPredicted RBP18■□□□□ 0.47
SH3PXD2B-201ENST00000311601 MRS2Q9HD23 443 aa17.99■□□□□ 0.47
SH3PXD2B-201ENST00000311601 POGKQ9P215 609 aa17.99■□□□□ 0.47
SH3PXD2B-201ENST00000311601 EIF4G1Q04637 1599 aaKnown RBP17.98■□□□□ 0.47
SH3PXD2B-201ENST00000311601 NPHP1O15259 732 aa17.98■□□□□ 0.47
SH3PXD2B-201ENST00000311601 FKBP8Q14318 412 aa17.97■□□□□ 0.47
SH3PXD2B-201ENST00000311601 KIF27Q86VH2 1401 aa17.96■□□□□ 0.47
SH3PXD2B-201ENST00000311601 MYH16Q9H6N6 1097 aa17.96■□□□□ 0.47
SH3PXD2B-201ENST00000311601 WRNQ14191 1432 aaPredicted RBP eCLIP17.95■□□□□ 0.46
SH3PXD2B-201ENST00000311601 EIF4G2P78344 907 aaKnown RBP eCLIP17.94■□□□□ 0.46
SH3PXD2B-201ENST00000311601 SENP3-EIF4A1A0A087X0R7 540 aa17.91■□□□□ 0.46
SH3PXD2B-201ENST00000311601 GOLGA3Q08378 1498 aa17.89■□□□□ 0.46
SH3PXD2B-201ENST00000311601 LAS1LQ9Y4W2 734 aaKnown RBP17.88■□□□□ 0.45
SH3PXD2B-201ENST00000311601 CCDC136Q96JN2 1154 aa17.87■□□□□ 0.45
SH3PXD2B-201ENST00000311601 CFAP53Q96M91 514 aa17.87■□□□□ 0.45
SH3PXD2B-201ENST00000311601 SOX12O15370 315 aa17.87■□□□□ 0.45
SH3PXD2B-201ENST00000311601 TNNT2P45379 298 aaPredicted RBP17.86■□□□□ 0.45
SH3PXD2B-201ENST00000311601 ANP32BQ92688 251 aaKnown RBP17.86■□□□□ 0.45
SH3PXD2B-201ENST00000311601 KNSTRNQ9Y448 316 aa17.85■□□□□ 0.45
SH3PXD2B-201ENST00000311601 CARD11Q9BXL7 1154 aa17.84■□□□□ 0.45
SH3PXD2B-201ENST00000311601 GGT6Q6P531 493 aa17.83■□□□□ 0.44
SH3PXD2B-201ENST00000311601 DCAF1Q9Y4B6 1507 aa17.83■□□□□ 0.44
SH3PXD2B-201ENST00000311601 NEUROD2Q15784 382 aa17.82■□□□□ 0.44
SH3PXD2B-201ENST00000311601 CDCA8Q53HL2 280 aa17.82■□□□□ 0.44
SH3PXD2B-201ENST00000311601 CEP162Q5TB80 1403 aa17.79■□□□□ 0.44
SH3PXD2B-201ENST00000311601 IRX6P78412 446 aaPredicted RBP17.79■□□□□ 0.44
SH3PXD2B-201ENST00000311601 SAFB2Q14151 953 aaKnown RBP eCLIP17.79■□□□□ 0.44
SH3PXD2B-201ENST00000311601 CCNB3Q8WWL7 1395 aa17.79■□□□□ 0.44
SH3PXD2B-201ENST00000311601 HDGFP51858 240 aaKnown RBP17.78■□□□□ 0.44
SH3PXD2B-201ENST00000311601 KANK1Q14678 1352 aa17.77■□□□□ 0.44
SH3PXD2B-201ENST00000311601 TULP1O00294 542 aaPredicted RBP17.76■□□□□ 0.43
SH3PXD2B-201ENST00000311601 CUX2O14529 1486 aa17.76■□□□□ 0.43
SH3PXD2B-201ENST00000311601 EEA1Q15075 1411 aa17.76■□□□□ 0.43
SH3PXD2B-201ENST00000311601 BAZ1AQ9NRL2 1556 aaPredicted RBP17.75■□□□□ 0.43
SH3PXD2B-201ENST00000311601 MAPK8IP3Q9UPT6 1336 aa17.75■□□□□ 0.43
SH3PXD2B-201ENST00000311601 ACIN1Q9UKV3 1341 aaKnown RBP17.74■□□□□ 0.43
SH3PXD2B-201ENST00000311601 CECR2Q9BXF3 1484 aa17.74■□□□□ 0.43
SH3PXD2B-201ENST00000311601 STK26Q9P289 416 aa17.73■□□□□ 0.43
SH3PXD2B-201ENST00000311601 SRPK2P78362 688 aaKnown RBP17.72■□□□□ 0.43
SH3PXD2B-201ENST00000311601 U2SURPO15042 1029 aaKnown RBP17.72■□□□□ 0.43
SH3PXD2B-201ENST00000311601 CDK11BP21127 795 aaKnown RBP17.72■□□□□ 0.43
SH3PXD2B-201ENST00000311601 CARMIL1Q5VZK9 1371 aa17.7■□□□□ 0.42
SH3PXD2B-201ENST00000311601 NUDCQ9Y266 331 aa17.7■□□□□ 0.42
SH3PXD2B-201ENST00000311601 CEP164Q9UPV0 1460 aa17.7■□□□□ 0.42
SH3PXD2B-201ENST00000311601 TAOK2Q9UL54 1235 aa17.69■□□□□ 0.42
SH3PXD2B-201ENST00000311601 PAK3O75914 559 aaPredicted RBP17.69■□□□□ 0.42
SH3PXD2B-201ENST00000311601 CC2D1BQ5T0F9 858 aaKnown RBP17.68■□□□□ 0.42
SH3PXD2B-201ENST00000311601 FTSJ3Q8IY81 847 aaKnown RBP17.68■□□□□ 0.42
SH3PXD2B-201ENST00000311601 DCAF11Q8TEB1 546 aa17.68■□□□□ 0.42
SH3PXD2B-201ENST00000311601 PDS5BQ9NTI5 1447 aa17.67■□□□□ 0.42
SH3PXD2B-201ENST00000311601 CCDC9Q9Y3X0 531 aaKnown RBP17.65■□□□□ 0.42
SH3PXD2B-201ENST00000311601 GOLGA2Q08379 1002 aa17.64■□□□□ 0.41
SH3PXD2B-201ENST00000311601 CARMIL2Q6F5E8 1435 aa17.63■□□□□ 0.41
SH3PXD2B-201ENST00000311601 SIN3AQ96ST3 1273 aa17.62■□□□□ 0.41
SH3PXD2B-201ENST00000311601 OS9Q13438 667 aaPredicted RBP17.61■□□□□ 0.41
SH3PXD2B-201ENST00000311601 TDRD9Q8NDG6 1382 aaKnown RBP17.61■□□□□ 0.41
SH3PXD2B-201ENST00000311601 TPRNQ4KMQ1 711 aa17.6■□□□□ 0.41
SH3PXD2B-201ENST00000311601 FHAD1B1AJZ9 1412 aa17.6■□□□□ 0.41
SH3PXD2B-201ENST00000311601 SOGA1O94964 1423 aa17.59■□□□□ 0.41
SH3PXD2B-201ENST00000311601 CSB-PGBD3P0DP91 1061 aa17.59■□□□□ 0.41
SH3PXD2B-201ENST00000311601 MIER1Q8N108 512 aa17.58■□□□□ 0.41
SH3PXD2B-201ENST00000311601 FRAT1Q92837 279 aaPredicted RBP17.57■□□□□ 0.4
SH3PXD2B-201ENST00000311601 TMF1P82094 1093 aa17.55■□□□□ 0.4
SH3PXD2B-201ENST00000311601 AEBP2Q6ZN18 517 aaPredicted RBP17.55■□□□□ 0.4
SH3PXD2B-201ENST00000311601 TNIKQ9UKE5 1360 aa17.55■□□□□ 0.4
SH3PXD2B-201ENST00000311601 ZNF330Q9Y3S2 320 aaPredicted RBP17.55■□□□□ 0.4
SH3PXD2B-201ENST00000311601 NBR1Q14596 966 aa17.55■□□□□ 0.4
SH3PXD2B-201ENST00000311601 CYB5RLQ6IPT4 315 aa17.54■□□□□ 0.4
SH3PXD2B-201ENST00000311601 CASC1Q6TDU7 716 aa17.54■□□□□ 0.4
SH3PXD2B-201ENST00000311601 EFCAB2Q5VUJ9 269 aa17.52■□□□□ 0.4
SH3PXD2B-201ENST00000311601 PNNQ9H307 717 aaKnown RBP17.52■□□□□ 0.4
SH3PXD2B-201ENST00000311601 SMARCA2P51531 1590 aa17.51■□□□□ 0.39
SH3PXD2B-201ENST00000311601 NUTM2DQ5VT03 806 aaPredicted RBP17.51■□□□□ 0.39
SH3PXD2B-201ENST00000311601 NCLP19338 710 aaKnown RBP17.5■□□□□ 0.39
SH3PXD2B-201ENST00000311601 RTF1Q92541 710 aaKnown RBP17.5■□□□□ 0.39
SH3PXD2B-201ENST00000311601 FOXD1Q16676 465 aa17.5■□□□□ 0.39
SH3PXD2B-201ENST00000311601 MORC1Q86VD1 984 aa17.5■□□□□ 0.39
SH3PXD2B-201ENST00000311601 KIF3BO15066 747 aa17.49■□□□□ 0.39
SH3PXD2B-201ENST00000311601 NAP1L2Q9ULW6 460 aaPredicted RBP17.49■□□□□ 0.39
SH3PXD2B-201ENST00000311601 EID1Q9Y6B2 187 aa17.49■□□□□ 0.39
SH3PXD2B-201ENST00000311601 MYO15BQ96JP2 1530 aa17.48■□□□□ 0.39
SH3PXD2B-201ENST00000311601 HDGFL2Q7Z4V5 671 aaPredicted RBP17.48■□□□□ 0.39
SH3PXD2B-201ENST00000311601 ISY1Q9ULR0 285 aaKnown RBP17.47■□□□□ 0.39
SH3PXD2B-201ENST00000311601 PKD2Q13563 968 aa17.47■□□□□ 0.39
SH3PXD2B-201ENST00000311601 FGD1P98174 961 aa17.47■□□□□ 0.39
SH3PXD2B-201ENST00000311601 ABCC8Q09428 1581 aa17.46■□□□□ 0.39
SH3PXD2B-201ENST00000311601 ZRSR1Q15695 479 aaKnown RBP17.45■□□□□ 0.38
SH3PXD2B-201ENST00000311601 NUTM2FA1L443 756 aa17.45■□□□□ 0.38
SH3PXD2B-201ENST00000311601 KCNJ4P48050 445 aa17.45■□□□□ 0.38
SH3PXD2B-201ENST00000311601 HNRNPMP52272 730 aaKnown RBP eCLIP17.45■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms