RNA–Protein interactions for RNA: ENST00000300482.9

TRPM2-202, Transcript of transient receptor potential cation channel subfamily M member 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TRPM2, Length 5,989 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRPM2-202ENST00000300482 ARXQ96QS3 562 aa24.2■■□□□ 1.46
TRPM2-202ENST00000300482 RB1CC1Q8TDY2 1594 aa24.17■■□□□ 1.46
TRPM2-202ENST00000300482 SLC24A1O60721 1099 aa24.16■■□□□ 1.46
TRPM2-202ENST00000300482 PPM1GO15355 546 aaPredicted RBP24.15■■□□□ 1.46
TRPM2-202ENST00000300482 NOP58Q9Y2X3 529 aaKnown RBP24.15■■□□□ 1.46
TRPM2-202ENST00000300482 BECN1Q14457 450 aa24.14■■□□□ 1.45
TRPM2-202ENST00000300482 WRNQ14191 1432 aaPredicted RBP eCLIP24.12■■□□□ 1.45
TRPM2-202ENST00000300482 KDM2AQ9Y2K7 1162 aa24.1■■□□□ 1.45
TRPM2-202ENST00000300482 RRP7BPQ9NSQ0 103 aa24.08■■□□□ 1.45
TRPM2-202ENST00000300482 RBM19Q9Y4C8 960 aaKnown RBP24.04■■□□□ 1.44
TRPM2-202ENST00000300482 CCER2I3L3R5 266 aa24.01■■□□□ 1.43
TRPM2-202ENST00000300482 SIN3AQ96ST3 1273 aa24■■□□□ 1.43
TRPM2-202ENST00000300482 TSPY4P0CV99 314 aa23.98■■□□□ 1.43
TRPM2-202ENST00000300482 TSPY10P0CW01 314 aa23.98■■□□□ 1.43
TRPM2-202ENST00000300482 PLPPR3Q6T4P5 718 aa23.98■■□□□ 1.43
TRPM2-202ENST00000300482 TRIM44Q96DX7 344 aaPredicted RBP23.97■■□□□ 1.43
TRPM2-202ENST00000300482 GRWD1Q9BQ67 446 aaKnown RBP eCLIP23.97■■□□□ 1.43
TRPM2-202ENST00000300482 LAS1LQ9Y4W2 734 aaKnown RBP23.96■■□□□ 1.43
TRPM2-202ENST00000300482 CHGAP10645 457 aaKnown RBP23.96■■□□□ 1.43
TRPM2-202ENST00000300482 ERICH6BQ5W0A0 696 aa23.96■■□□□ 1.43
TRPM2-202ENST00000300482 NPM1P06748 294 aaKnown RBP eCLIP23.94■■□□□ 1.42
TRPM2-202ENST00000300482 B4GALNT3Q6L9W6 998 aa23.94■■□□□ 1.42
TRPM2-202ENST00000300482 CCNB3Q8WWL7 1395 aa23.94■■□□□ 1.42
TRPM2-202ENST00000300482 DEKP35659 375 aaKnown RBP23.93■■□□□ 1.42
TRPM2-202ENST00000300482 TIMELESSQ9UNS1 1208 aa23.93■■□□□ 1.42
TRPM2-202ENST00000300482 RTN4Q9NQC3 1192 aaKnown RBP23.9■■□□□ 1.42
TRPM2-202ENST00000300482 TSHZ2Q9NRE2 1034 aa23.9■■□□□ 1.42
TRPM2-202ENST00000300482 KIF27Q86VH2 1401 aa23.9■■□□□ 1.42
TRPM2-202ENST00000300482 MYH16Q9H6N6 1097 aa23.86■■□□□ 1.41
TRPM2-202ENST00000300482 SENP3-EIF4A1A0A087X0R7 540 aa23.85■■□□□ 1.41
TRPM2-202ENST00000300482 GOLGA6L22H0YM25 854 aa23.85■■□□□ 1.41
TRPM2-202ENST00000300482 ESF1Q9H501 851 aaKnown RBP23.85■■□□□ 1.41
TRPM2-202ENST00000300482 SOGA1O94964 1423 aa23.82■■□□□ 1.4
TRPM2-202ENST00000300482 VPS8Q8N3P4 1428 aa23.81■■□□□ 1.4
TRPM2-202ENST00000300482 CARD11Q9BXL7 1154 aa23.79■■□□□ 1.4
TRPM2-202ENST00000300482 NACADO15069 1562 aa23.76■■□□□ 1.39
TRPM2-202ENST00000300482 BAZ1AQ9NRL2 1556 aaPredicted RBP23.76■■□□□ 1.39
TRPM2-202ENST00000300482 SETD5Q9C0A6 1442 aa23.75■■□□□ 1.39
TRPM2-202ENST00000300482 NAP1L5Q96NT1 182 aaPredicted RBP23.74■■□□□ 1.39
TRPM2-202ENST00000300482 KNSTRNQ9Y448 316 aa23.74■■□□□ 1.39
TRPM2-202ENST00000300482 STAG3Q9UJ98 1225 aa23.72■■□□□ 1.39
TRPM2-202ENST00000300482 NCLP19338 710 aaKnown RBP23.72■■□□□ 1.39
TRPM2-202ENST00000300482 CDCA8Q53HL2 280 aa23.72■■□□□ 1.39
TRPM2-202ENST00000300482 BAZ1BQ9UIG0 1483 aaKnown RBP23.72■■□□□ 1.39
TRPM2-202ENST00000300482 RGS3P49796 1198 aa23.71■■□□□ 1.39
TRPM2-202ENST00000300482 FHAD1B1AJZ9 1412 aa23.7■■□□□ 1.38
TRPM2-202ENST00000300482 CHMP7Q8WUX9 453 aaPredicted RBP23.69■■□□□ 1.38
TRPM2-202ENST00000300482 RGL3Q3MIN7 710 aa23.66■■□□□ 1.38
TRPM2-202ENST00000300482 CECR2Q9BXF3 1484 aa23.66■■□□□ 1.38
TRPM2-202ENST00000300482 CFAP53Q96M91 514 aa23.64■■□□□ 1.38
TRPM2-202ENST00000300482 FTSJ3Q8IY81 847 aaKnown RBP23.63■■□□□ 1.37
TRPM2-202ENST00000300482 TNNT2P45379 298 aaPredicted RBP23.63■■□□□ 1.37
TRPM2-202ENST00000300482 HSPA5P11021 654 aaKnown RBP23.63■■□□□ 1.37
TRPM2-202ENST00000300482 PTMAP06454 111 aaKnown RBP23.61■■□□□ 1.37
TRPM2-202ENST00000300482 CFDP1Q9UEE9 299 aaPredicted RBP23.61■■□□□ 1.37
TRPM2-202ENST00000300482 L1TD1Q5T7N2 865 aaKnown RBP23.6■■□□□ 1.37
TRPM2-202ENST00000300482 RAB3GAP2Q9H2M9 1393 aa23.58■■□□□ 1.36
TRPM2-202ENST00000300482 PLEKHD1A6NEE1 506 aa23.56■■□□□ 1.36
TRPM2-202ENST00000300482 ABCC8Q09428 1581 aa23.56■■□□□ 1.36
TRPM2-202ENST00000300482 KANK4Q5T7N3 995 aaPredicted RBP23.56■■□□□ 1.36
TRPM2-202ENST00000300482 CASC1Q6TDU7 716 aa23.55■■□□□ 1.36
TRPM2-202ENST00000300482 CCDC88BA6NC98 1476 aa23.54■■□□□ 1.36
TRPM2-202ENST00000300482 CC2D1BQ5T0F9 858 aaKnown RBP23.54■■□□□ 1.36
TRPM2-202ENST00000300482 ARHGAP35Q9NRY4 1499 aa23.53■■□□□ 1.36
TRPM2-202ENST00000300482 DNTTIP2Q5QJE6 756 aaKnown RBP23.53■■□□□ 1.36
TRPM2-202ENST00000300482 ERCC6Q03468 1493 aa23.53■■□□□ 1.36
TRPM2-202ENST00000300482 TCERG1O14776 1098 aaKnown RBP23.52■■□□□ 1.36
TRPM2-202ENST00000300482 FRAT1Q92837 279 aaPredicted RBP23.52■■□□□ 1.36
TRPM2-202ENST00000300482 IPO9Q96P70 1041 aaKnown RBP23.5■■□□□ 1.35
TRPM2-202ENST00000300482 HSP90AB1P08238 724 aaKnown RBP23.49■■□□□ 1.35
TRPM2-202ENST00000300482 MS4A1P11836 297 aa23.48■■□□□ 1.35
TRPM2-202ENST00000300482 NEUROD2Q15784 382 aa23.48■■□□□ 1.35
TRPM2-202ENST00000300482 PPP1R15AO75807 674 aaPredicted RBP23.46■■□□□ 1.35
TRPM2-202ENST00000300482 MROH2BQ7Z745 1585 aa23.46■■□□□ 1.35
TRPM2-202ENST00000300482 HSCBQ8IWL3 235 aa23.45■■□□□ 1.34
TRPM2-202ENST00000300482 CARMIL1Q5VZK9 1371 aa23.45■■□□□ 1.34
TRPM2-202ENST00000300482 RCAN3Q9UKA8 241 aa23.43■■□□□ 1.34
TRPM2-202ENST00000300482 TMF1P82094 1093 aa23.43■■□□□ 1.34
TRPM2-202ENST00000300482 CHMP4BQ9H444 224 aaKnown RBP23.42■■□□□ 1.34
TRPM2-202ENST00000300482 MAPK8IP3Q9UPT6 1336 aa23.42■■□□□ 1.34
TRPM2-202ENST00000300482 NUDCQ9Y266 331 aa23.41■■□□□ 1.34
TRPM2-202ENST00000300482 KTN1Q86UP2 1357 aaKnown RBP23.39■■□□□ 1.33
TRPM2-202ENST00000300482 DCAF11Q8TEB1 546 aa23.39■■□□□ 1.33
TRPM2-202ENST00000300482 DHX57Q6P158 1386 aaKnown RBP23.38■■□□□ 1.33
TRPM2-202ENST00000300482 CUX2O14529 1486 aa23.38■■□□□ 1.33
TRPM2-202ENST00000300482 RALBP1Q15311 655 aa23.35■■□□□ 1.33
TRPM2-202ENST00000300482 MSNP26038 577 aaKnown RBP23.34■■□□□ 1.33
TRPM2-202ENST00000300482 KCNH8Q96L42 1107 aa23.32■■□□□ 1.32
TRPM2-202ENST00000300482 FANCIQ9NVI1 1328 aa23.31■■□□□ 1.32
TRPM2-202ENST00000300482 ZRSR1Q15695 479 aaKnown RBP23.29■■□□□ 1.32
TRPM2-202ENST00000300482 SPRYD3Q8NCJ5 442 aa23.29■■□□□ 1.32
TRPM2-202ENST00000300482 ZBTB4Q9P1Z0 1013 aaPredicted RBP23.28■■□□□ 1.32
TRPM2-202ENST00000300482 TPRNQ4KMQ1 711 aa23.28■■□□□ 1.32
TRPM2-202ENST00000300482 USP35Q9P2H5 1018 aa23.28■■□□□ 1.32
TRPM2-202ENST00000300482 MPHOSPH9Q99550 1183 aa23.27■■□□□ 1.32
TRPM2-202ENST00000300482 PTMSP20962 102 aa23.26■■□□□ 1.31
TRPM2-202ENST00000300482 FMN1Q68DA7 1419 aa23.26■■□□□ 1.31
TRPM2-202ENST00000300482 PLCB2Q00722 1185 aa23.25■■□□□ 1.31
TRPM2-202ENST00000300482 FOXD1Q16676 465 aa23.25■■□□□ 1.31
TRPM2-202ENST00000300482 PNNQ9H307 717 aaKnown RBP23.24■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 9.7 ms