RNA–Protein interactions for RNA: ENST00000299366.11

CDH23-202, Transcript of cadherin related 23, humanhuman

TSL 5 BASIC

Gene CDH23, Length 3,954 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH23-202ENST00000299366 CHGAP10645 457 aaKnown RBP20.18■□□□□ 0.82
CDH23-202ENST00000299366 CANXP27824 592 aaKnown RBP20.18■□□□□ 0.82
CDH23-202ENST00000299366 RUSC2Q8N2Y8 1516 aa20.17■□□□□ 0.82
CDH23-202ENST00000299366 ANP32AP39687 249 aaKnown RBP20.16■□□□□ 0.82
CDH23-202ENST00000299366 RGL3Q3MIN7 710 aa20.14■□□□□ 0.81
CDH23-202ENST00000299366 WIZO95785 1651 aa20.13■□□□□ 0.81
CDH23-202ENST00000299366 EIF4G2P78344 907 aaKnown RBP eCLIP20.11■□□□□ 0.81
CDH23-202ENST00000299366 FOXD1Q16676 465 aa20.08■□□□□ 0.81
CDH23-202ENST00000299366 EEA1Q15075 1411 aa20.07■□□□□ 0.8
CDH23-202ENST00000299366 CEP164Q9UPV0 1460 aa20.07■□□□□ 0.8
CDH23-202ENST00000299366 SLC24A1O60721 1099 aa20.06■□□□□ 0.8
CDH23-202ENST00000299366 ARXQ96QS3 562 aa20.06■□□□□ 0.8
CDH23-202ENST00000299366 RBM19Q9Y4C8 960 aaKnown RBP20.04■□□□□ 0.8
CDH23-202ENST00000299366 BAZ1BQ9UIG0 1483 aaKnown RBP20.03■□□□□ 0.8
CDH23-202ENST00000299366 NACADO15069 1562 aa20.02■□□□□ 0.8
CDH23-202ENST00000299366 B4GALNT3Q6L9W6 998 aa20.02■□□□□ 0.79
CDH23-202ENST00000299366 CCNB3Q8WWL7 1395 aa19.99■□□□□ 0.79
CDH23-202ENST00000299366 PLPPR3Q6T4P5 718 aa19.99■□□□□ 0.79
CDH23-202ENST00000299366 TSPY4P0CV99 314 aa19.97■□□□□ 0.79
CDH23-202ENST00000299366 TSPY10P0CW01 314 aa19.97■□□□□ 0.79
CDH23-202ENST00000299366 KIF27Q86VH2 1401 aa19.97■□□□□ 0.79
CDH23-202ENST00000299366 BAZ1AQ9NRL2 1556 aaPredicted RBP19.95■□□□□ 0.78
CDH23-202ENST00000299366 CHMP7Q8WUX9 453 aaPredicted RBP19.94■□□□□ 0.78
CDH23-202ENST00000299366 ZBTB47Q9UFB7 747 aaPredicted RBP19.92■□□□□ 0.78
CDH23-202ENST00000299366 EIF5BO60841 1220 aaKnown RBP19.92■□□□□ 0.78
CDH23-202ENST00000299366 VPS8Q8N3P4 1428 aa19.9■□□□□ 0.78
CDH23-202ENST00000299366 DHX57Q6P158 1386 aaKnown RBP19.88■□□□□ 0.77
CDH23-202ENST00000299366 CFDP1Q9UEE9 299 aaPredicted RBP19.85■□□□□ 0.77
CDH23-202ENST00000299366 RAB3GAP2Q9H2M9 1393 aa19.84■□□□□ 0.77
CDH23-202ENST00000299366 CUX2O14529 1486 aa19.84■□□□□ 0.77
CDH23-202ENST00000299366 CARMIL1Q5VZK9 1371 aa19.83■□□□□ 0.76
CDH23-202ENST00000299366 CARD11Q9BXL7 1154 aa19.82■□□□□ 0.76
CDH23-202ENST00000299366 NEUROD2Q15784 382 aa19.8■□□□□ 0.76
CDH23-202ENST00000299366 RAPGEF2Q9Y4G8 1499 aa19.8■□□□□ 0.76
CDH23-202ENST00000299366 WDR43Q15061 677 aaKnown RBP eCLIP19.8■□□□□ 0.76
CDH23-202ENST00000299366 HSPA5P11021 654 aaKnown RBP19.78■□□□□ 0.76
CDH23-202ENST00000299366 LAS1LQ9Y4W2 734 aaKnown RBP19.76■□□□□ 0.75
CDH23-202ENST00000299366 CC2D1BQ5T0F9 858 aaKnown RBP19.76■□□□□ 0.75
CDH23-202ENST00000299366 RTN4Q9NQC3 1192 aaKnown RBP19.76■□□□□ 0.75
CDH23-202ENST00000299366 PLEKHG5O94827 1062 aa19.75■□□□□ 0.75
CDH23-202ENST00000299366 TNNT2P45379 298 aaPredicted RBP19.75■□□□□ 0.75
CDH23-202ENST00000299366 PLEKHD1A6NEE1 506 aa19.73■□□□□ 0.75
CDH23-202ENST00000299366 TDRD9Q8NDG6 1382 aaKnown RBP19.71■□□□□ 0.75
CDH23-202ENST00000299366 DCAF11Q8TEB1 546 aa19.7■□□□□ 0.74
CDH23-202ENST00000299366 SETD5Q9C0A6 1442 aa19.7■□□□□ 0.74
CDH23-202ENST00000299366 NEFMP07197 916 aa19.7■□□□□ 0.74
CDH23-202ENST00000299366 STAG3Q9UJ98 1225 aa19.69■□□□□ 0.74
CDH23-202ENST00000299366 RGS3P49796 1198 aa19.69■□□□□ 0.74
CDH23-202ENST00000299366 PPP1R15AO75807 674 aaPredicted RBP19.68■□□□□ 0.74
CDH23-202ENST00000299366 HSP90AA1P07900 732 aaKnown RBP19.66■□□□□ 0.74
CDH23-202ENST00000299366 PPP4R2Q9NY27 417 aa19.66■□□□□ 0.74
CDH23-202ENST00000299366 L3MBTL2Q969R5 705 aa19.61■□□□□ 0.73
CDH23-202ENST00000299366 DEKP35659 375 aaKnown RBP19.6■□□□□ 0.73
CDH23-202ENST00000299366 TOP2AP11388 1531 aaKnown RBP19.6■□□□□ 0.73
CDH23-202ENST00000299366 FHOD3Q2V2M9 1422 aa19.6■□□□□ 0.73
CDH23-202ENST00000299366 GOLGA6L2Q8N9W4 650 aaPredicted RBP19.59■□□□□ 0.73
CDH23-202ENST00000299366 EIF4G1Q04637 1599 aaKnown RBP19.59■□□□□ 0.73
CDH23-202ENST00000299366 PPM1GO15355 546 aaPredicted RBP19.59■□□□□ 0.73
CDH23-202ENST00000299366 PKD2Q13563 968 aa19.59■□□□□ 0.73
CDH23-202ENST00000299366 MPHOSPH9Q99550 1183 aa19.57■□□□□ 0.72
CDH23-202ENST00000299366 FRAT1Q92837 279 aaPredicted RBP19.56■□□□□ 0.72
CDH23-202ENST00000299366 UPF2Q9HAU5 1272 aaKnown RBP19.55■□□□□ 0.72
CDH23-202ENST00000299366 KNSTRNQ9Y448 316 aa19.55■□□□□ 0.72
CDH23-202ENST00000299366 CCER2I3L3R5 266 aa19.53■□□□□ 0.72
CDH23-202ENST00000299366 FHAD1B1AJZ9 1412 aa19.53■□□□□ 0.72
CDH23-202ENST00000299366 NPM1P06748 294 aaKnown RBP eCLIP19.51■□□□□ 0.71
CDH23-202ENST00000299366 SMARCA2P51531 1590 aa19.51■□□□□ 0.71
CDH23-202ENST00000299366 SAFB2Q14151 953 aaKnown RBP eCLIP19.5■□□□□ 0.71
CDH23-202ENST00000299366 NOP58Q9Y2X3 529 aaKnown RBP19.5■□□□□ 0.71
CDH23-202ENST00000299366 MSH5O43196 834 aa19.48■□□□□ 0.71
CDH23-202ENST00000299366 ARHGAP35Q9NRY4 1499 aa19.48■□□□□ 0.71
CDH23-202ENST00000299366 SMARCA4P51532 1647 aa19.46■□□□□ 0.71
CDH23-202ENST00000299366 ESF1Q9H501 851 aaKnown RBP19.46■□□□□ 0.71
CDH23-202ENST00000299366 KIF21BO75037 1637 aa19.45■□□□□ 0.7
CDH23-202ENST00000299366 ATAD2BQ9ULI0 1458 aa19.44■□□□□ 0.7
CDH23-202ENST00000299366 TPRNQ4KMQ1 711 aa19.43■□□□□ 0.7
CDH23-202ENST00000299366 TIMELESSQ9UNS1 1208 aa19.42■□□□□ 0.7
CDH23-202ENST00000299366 SPRYD3Q8NCJ5 442 aa19.41■□□□□ 0.7
CDH23-202ENST00000299366 ZBTB7CA1YPR0 619 aa19.37■□□□□ 0.69
CDH23-202ENST00000299366 HNRNPMP52272 730 aaKnown RBP eCLIP19.37■□□□□ 0.69
CDH23-202ENST00000299366 U2SURPO15042 1029 aaKnown RBP19.36■□□□□ 0.69
CDH23-202ENST00000299366 PLIN1O60240 522 aa19.35■□□□□ 0.69
CDH23-202ENST00000299366 NUP155O75694 1391 aa19.35■□□□□ 0.69
CDH23-202ENST00000299366 SOX12O15370 315 aa19.33■□□□□ 0.69
CDH23-202ENST00000299366 ZNF644Q9H582 1327 aaPredicted RBP19.33■□□□□ 0.68
CDH23-202ENST00000299366 ST20-MTHFSA0A0A6YYL1 179 aa19.33■□□□□ 0.68
CDH23-202ENST00000299366 SYNJ1O43426 1573 aa19.31■□□□□ 0.68
CDH23-202ENST00000299366 ARAP1Q96P48 1450 aa19.31■□□□□ 0.68
CDH23-202ENST00000299366 RCAN3Q9UKA8 241 aa19.31■□□□□ 0.68
CDH23-202ENST00000299366 CCDC146Q8IYE0 955 aa19.3■□□□□ 0.68
CDH23-202ENST00000299366 NUTM2DQ5VT03 806 aaPredicted RBP19.3■□□□□ 0.68
CDH23-202ENST00000299366 PRKRIP1Q9H875 184 aaPredicted RBP19.29■□□□□ 0.68
CDH23-202ENST00000299366 PHLDB1Q86UU1 1377 aa19.29■□□□□ 0.68
CDH23-202ENST00000299366 C14orf37Q86TY3 774 aa19.29■□□□□ 0.68
CDH23-202ENST00000299366 FTSJ3Q8IY81 847 aaKnown RBP19.29■□□□□ 0.68
CDH23-202ENST00000299366 FANCIQ9NVI1 1328 aa19.28■□□□□ 0.68
CDH23-202ENST00000299366 TMF1P82094 1093 aa19.28■□□□□ 0.68
CDH23-202ENST00000299366 CCDC184Q52MB2 194 aa19.28■□□□□ 0.68
CDH23-202ENST00000299366 SLC4A3P48751 1232 aa19.27■□□□□ 0.68
CDH23-202ENST00000299366 GGT6Q6P531 493 aa19.27■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms