RNA–Protein interactions for RNA: ENST00000299213.9

LARP6-201, Transcript of La ribonucleoprotein domain family member 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LARP6, Length 4,469 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LARP6-201ENST00000299213 SIN3AQ96ST3 1273 aa21.5■■□□□ 1.03
LARP6-201ENST00000299213 IRX6P78412 446 aaPredicted RBP21.46■■□□□ 1.03
LARP6-201ENST00000299213 NPM2Q86SE8 214 aaKnown RBP21.46■■□□□ 1.03
LARP6-201ENST00000299213 ANP32AP39687 249 aaKnown RBP21.43■■□□□ 1.02
LARP6-201ENST00000299213 NEFMP07197 916 aa21.42■■□□□ 1.02
LARP6-201ENST00000299213 NPM1P06748 294 aaKnown RBP eCLIP21.41■■□□□ 1.02
LARP6-201ENST00000299213 ZBTB47Q9UFB7 747 aaPredicted RBP21.39■■□□□ 1.02
LARP6-201ENST00000299213 PLEKHD1A6NEE1 506 aa21.39■■□□□ 1.01
LARP6-201ENST00000299213 SLC24A1O60721 1099 aa21.38■■□□□ 1.01
LARP6-201ENST00000299213 KCNH8Q96L42 1107 aa21.38■■□□□ 1.01
LARP6-201ENST00000299213 CARMIL1Q5VZK9 1371 aa21.38■■□□□ 1.01
LARP6-201ENST00000299213 CCNB3Q8WWL7 1395 aa21.38■■□□□ 1.01
LARP6-201ENST00000299213 KANK4Q5T7N3 995 aaPredicted RBP21.37■■□□□ 1.01
LARP6-201ENST00000299213 CUX2O14529 1486 aa21.37■■□□□ 1.01
LARP6-201ENST00000299213 CFDP1Q9UEE9 299 aaPredicted RBP21.36■■□□□ 1.01
LARP6-201ENST00000299213 CCDC136Q96JN2 1154 aa21.35■■□□□ 1.01
LARP6-201ENST00000299213 SENP3-EIF4A1A0A087X0R7 540 aa21.34■■□□□ 1.01
LARP6-201ENST00000299213 RGL3Q3MIN7 710 aa21.34■■□□□ 1.01
LARP6-201ENST00000299213 VPS8Q8N3P4 1428 aa21.33■■□□□ 1.01
LARP6-201ENST00000299213 STAG3Q9UJ98 1225 aa21.33■■□□□ 1
LARP6-201ENST00000299213 WIZO95785 1651 aa21.33■■□□□ 1
LARP6-201ENST00000299213 ESF1Q9H501 851 aaKnown RBP21.28■■□□□ 1
LARP6-201ENST00000299213 FHAD1B1AJZ9 1412 aa21.24■□□□□ 0.99
LARP6-201ENST00000299213 WDR43Q15061 677 aaKnown RBP eCLIP21.23■□□□□ 0.99
LARP6-201ENST00000299213 PLPPR3Q6T4P5 718 aa21.21■□□□□ 0.99
LARP6-201ENST00000299213 SENP3Q9H4L4 574 aaPredicted RBP21.21■□□□□ 0.99
LARP6-201ENST00000299213 SUPT16HQ9Y5B9 1047 aaKnown RBP21.18■□□□□ 0.98
LARP6-201ENST00000299213 TOP2AP11388 1531 aaKnown RBP21.16■□□□□ 0.98
LARP6-201ENST00000299213 CARD11Q9BXL7 1154 aa21.16■□□□□ 0.98
LARP6-201ENST00000299213 SMARCA2P51531 1590 aa21.12■□□□□ 0.97
LARP6-201ENST00000299213 RUSC2Q8N2Y8 1516 aa21.11■□□□□ 0.97
LARP6-201ENST00000299213 TDRD9Q8NDG6 1382 aaKnown RBP21.1■□□□□ 0.97
LARP6-201ENST00000299213 SETD5Q9C0A6 1442 aa21.1■□□□□ 0.97
LARP6-201ENST00000299213 GOLGA6L2Q8N9W4 650 aaPredicted RBP21.09■□□□□ 0.97
LARP6-201ENST00000299213 EIF4G1Q04637 1599 aaKnown RBP21.08■□□□□ 0.96
LARP6-201ENST00000299213 NBR1Q14596 966 aa21.06■□□□□ 0.96
LARP6-201ENST00000299213 RAPGEF2Q9Y4G8 1499 aa21.05■□□□□ 0.96
LARP6-201ENST00000299213 TIMELESSQ9UNS1 1208 aa21.05■□□□□ 0.96
LARP6-201ENST00000299213 RAB3GAP2Q9H2M9 1393 aa21.05■□□□□ 0.96
LARP6-201ENST00000299213 FOXD1Q16676 465 aa21.03■□□□□ 0.96
LARP6-201ENST00000299213 ERCC6Q03468 1493 aa21.02■□□□□ 0.95
LARP6-201ENST00000299213 UPF2Q9HAU5 1272 aaKnown RBP21.01■□□□□ 0.95
LARP6-201ENST00000299213 ATAD2BQ9ULI0 1458 aa21■□□□□ 0.95
LARP6-201ENST00000299213 ARHGAP35Q9NRY4 1499 aa21■□□□□ 0.95
LARP6-201ENST00000299213 KNSTRNQ9Y448 316 aa20.98■□□□□ 0.95
LARP6-201ENST00000299213 DCAF11Q8TEB1 546 aa20.97■□□□□ 0.95
LARP6-201ENST00000299213 HSP90AA1P07900 732 aaKnown RBP20.96■□□□□ 0.95
LARP6-201ENST00000299213 HSPA5P11021 654 aaKnown RBP20.95■□□□□ 0.94
LARP6-201ENST00000299213 SMARCA4P51532 1647 aa20.94■□□□□ 0.94
LARP6-201ENST00000299213 CADPSQ9ULU8 1353 aa20.94■□□□□ 0.94
LARP6-201ENST00000299213 FHOD3Q2V2M9 1422 aa20.9■□□□□ 0.94
LARP6-201ENST00000299213 CDCA8Q53HL2 280 aa20.9■□□□□ 0.94
LARP6-201ENST00000299213 PKD2Q13563 968 aa20.9■□□□□ 0.94
LARP6-201ENST00000299213 PPP1R15AO75807 674 aaPredicted RBP20.89■□□□□ 0.94
LARP6-201ENST00000299213 CC2D1BQ5T0F9 858 aaKnown RBP20.89■□□□□ 0.93
LARP6-201ENST00000299213 FMN1Q68DA7 1419 aa20.88■□□□□ 0.93
LARP6-201ENST00000299213 NEUROD2Q15784 382 aa20.87■□□□□ 0.93
LARP6-201ENST00000299213 MPHOSPH9Q99550 1183 aa20.87■□□□□ 0.93
LARP6-201ENST00000299213 CCER2I3L3R5 266 aa20.87■□□□□ 0.93
LARP6-201ENST00000299213 PDS5BQ9NTI5 1447 aa20.86■□□□□ 0.93
LARP6-201ENST00000299213 B4GALNT3Q6L9W6 998 aa20.86■□□□□ 0.93
LARP6-201ENST00000299213 PPP4R2Q9NY27 417 aa20.85■□□□□ 0.93
LARP6-201ENST00000299213 TNNT2P45379 298 aaPredicted RBP20.81■□□□□ 0.92
LARP6-201ENST00000299213 DHX57Q6P158 1386 aaKnown RBP20.79■□□□□ 0.92
LARP6-201ENST00000299213 PPM1GO15355 546 aaPredicted RBP20.79■□□□□ 0.92
LARP6-201ENST00000299213 CFAP53Q96M91 514 aa20.79■□□□□ 0.92
LARP6-201ENST00000299213 L3MBTL2Q969R5 705 aa20.78■□□□□ 0.92
LARP6-201ENST00000299213 ARXQ96QS3 562 aa20.77■□□□□ 0.92
LARP6-201ENST00000299213 PLEKHG5O94827 1062 aa20.77■□□□□ 0.92
LARP6-201ENST00000299213 TMF1P82094 1093 aa20.75■□□□□ 0.91
LARP6-201ENST00000299213 NUP155O75694 1391 aa20.73■□□□□ 0.91
LARP6-201ENST00000299213 ANP32EQ9BTT0 268 aa20.71■□□□□ 0.91
LARP6-201ENST00000299213 CARMIL2Q6F5E8 1435 aa20.71■□□□□ 0.91
LARP6-201ENST00000299213 RGS3P49796 1198 aa20.68■□□□□ 0.9
LARP6-201ENST00000299213 C14orf37Q86TY3 774 aa20.68■□□□□ 0.9
LARP6-201ENST00000299213 FRAT1Q92837 279 aaPredicted RBP20.68■□□□□ 0.9
LARP6-201ENST00000299213 POGKQ9P215 609 aa20.68■□□□□ 0.9
LARP6-201ENST00000299213 MYH16Q9H6N6 1097 aa20.67■□□□□ 0.9
LARP6-201ENST00000299213 EIF5BO60841 1220 aaKnown RBP20.67■□□□□ 0.9
LARP6-201ENST00000299213 ARID4BQ4LE39 1312 aaPredicted RBP20.66■□□□□ 0.9
LARP6-201ENST00000299213 ZBTB7CA1YPR0 619 aa20.65■□□□□ 0.9
LARP6-201ENST00000299213 ANP32BQ92688 251 aaKnown RBP20.65■□□□□ 0.9
LARP6-201ENST00000299213 HNRNPMP52272 730 aaKnown RBP eCLIP20.65■□□□□ 0.9
LARP6-201ENST00000299213 IGF1RP08069 1367 aa20.65■□□□□ 0.9
LARP6-201ENST00000299213 GGT6Q6P531 493 aa20.64■□□□□ 0.89
LARP6-201ENST00000299213 ANKRD30AQ9BXX3 1397 aa20.64■□□□□ 0.89
LARP6-201ENST00000299213 FANCD2Q9BXW9 1451 aa20.63■□□□□ 0.89
LARP6-201ENST00000299213 FTSJ3Q8IY81 847 aaKnown RBP20.62■□□□□ 0.89
LARP6-201ENST00000299213 LAS1LQ9Y4W2 734 aaKnown RBP20.62■□□□□ 0.89
LARP6-201ENST00000299213 U2SURPO15042 1029 aaKnown RBP20.62■□□□□ 0.89
LARP6-201ENST00000299213 SAFB2Q14151 953 aaKnown RBP eCLIP20.62■□□□□ 0.89
LARP6-201ENST00000299213 JPH4Q96JJ6 628 aa20.62■□□□□ 0.89
LARP6-201ENST00000299213 MAPK8IP3Q9UPT6 1336 aa20.61■□□□□ 0.89
LARP6-201ENST00000299213 DDRGK1Q96HY6 314 aa20.61■□□□□ 0.89
LARP6-201ENST00000299213 NUDCQ9Y266 331 aa20.61■□□□□ 0.89
LARP6-201ENST00000299213 RBM19Q9Y4C8 960 aaKnown RBP20.6■□□□□ 0.89
LARP6-201ENST00000299213 EFCAB2Q5VUJ9 269 aa20.59■□□□□ 0.89
LARP6-201ENST00000299213 KANK1Q14678 1352 aa20.59■□□□□ 0.89
LARP6-201ENST00000299213 ROCK2O75116 1388 aaKnown RBP20.58■□□□□ 0.88
LARP6-201ENST00000299213 BECN1Q14457 450 aa20.57■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 61.5 ms