RNA–Protein interactions for RNA: ENST00000297267.13

FNDC1-201, Transcript of fibronectin type III domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FNDC1, Length 6,552 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC1-201ENST00000297267 KCNH8Q96L42 1107 aa20.71■□□□□ 0.91
FNDC1-201ENST00000297267 UPF2Q9HAU5 1272 aaKnown RBP20.71■□□□□ 0.91
FNDC1-201ENST00000297267 SUPT16HQ9Y5B9 1047 aaKnown RBP20.7■□□□□ 0.9
FNDC1-201ENST00000297267 LAS1LQ9Y4W2 734 aaKnown RBP20.69■□□□□ 0.9
FNDC1-201ENST00000297267 TULP1O00294 542 aaPredicted RBP20.68■□□□□ 0.9
FNDC1-201ENST00000297267 PPM1GO15355 546 aaPredicted RBP20.66■□□□□ 0.9
FNDC1-201ENST00000297267 NEUROD2Q15784 382 aa20.66■□□□□ 0.9
FNDC1-201ENST00000297267 TNNT2P45379 298 aaPredicted RBP20.66■□□□□ 0.9
FNDC1-201ENST00000297267 SIN3AQ96ST3 1273 aa20.62■□□□□ 0.89
FNDC1-201ENST00000297267 DCAF1Q9Y4B6 1507 aa20.61■□□□□ 0.89
FNDC1-201ENST00000297267 NCLP19338 710 aaKnown RBP20.61■□□□□ 0.89
FNDC1-201ENST00000297267 SPRYD3Q8NCJ5 442 aa20.55■□□□□ 0.88
FNDC1-201ENST00000297267 CC2D1BQ5T0F9 858 aaKnown RBP20.54■□□□□ 0.88
FNDC1-201ENST00000297267 GOLGA6L2Q8N9W4 650 aaPredicted RBP20.53■□□□□ 0.88
FNDC1-201ENST00000297267 MTUS2Q5JR59 1369 aa20.51■□□□□ 0.87
FNDC1-201ENST00000297267 RGS3P49796 1198 aa20.48■□□□□ 0.87
FNDC1-201ENST00000297267 B4GALNT3Q6L9W6 998 aa20.48■□□□□ 0.87
FNDC1-201ENST00000297267 ARID4BQ4LE39 1312 aaPredicted RBP20.45■□□□□ 0.86
FNDC1-201ENST00000297267 ZCCHC6Q5VYS8 1495 aaKnown RBP20.44■□□□□ 0.86
FNDC1-201ENST00000297267 EIF4G2P78344 907 aaKnown RBP eCLIP20.43■□□□□ 0.86
FNDC1-201ENST00000297267 NPM1P06748 294 aaKnown RBP eCLIP20.42■□□□□ 0.86
FNDC1-201ENST00000297267 AMER1Q5JTC6 1135 aaPredicted RBP20.42■□□□□ 0.86
FNDC1-201ENST00000297267 FRAT1Q92837 279 aaPredicted RBP20.42■□□□□ 0.86
FNDC1-201ENST00000297267 CHMP7Q8WUX9 453 aaPredicted RBP20.42■□□□□ 0.86
FNDC1-201ENST00000297267 SOX12O15370 315 aa20.42■□□□□ 0.86
FNDC1-201ENST00000297267 CLIP1P30622 1438 aa20.41■□□□□ 0.86
FNDC1-201ENST00000297267 TSPY4P0CV99 314 aa20.39■□□□□ 0.86
FNDC1-201ENST00000297267 TSPY10P0CW01 314 aa20.39■□□□□ 0.86
FNDC1-201ENST00000297267 MYH16Q9H6N6 1097 aa20.38■□□□□ 0.85
FNDC1-201ENST00000297267 FOXD1Q16676 465 aa20.37■□□□□ 0.85
FNDC1-201ENST00000297267 CEP162Q5TB80 1403 aa20.35■□□□□ 0.85
FNDC1-201ENST00000297267 PPP1R15AO75807 674 aaPredicted RBP20.35■□□□□ 0.85
FNDC1-201ENST00000297267 PLCB2Q00722 1185 aa20.35■□□□□ 0.85
FNDC1-201ENST00000297267 LMOD2Q6P5Q4 547 aa20.33■□□□□ 0.85
FNDC1-201ENST00000297267 SAFB2Q14151 953 aaKnown RBP eCLIP20.33■□□□□ 0.84
FNDC1-201ENST00000297267 ANP32EQ9BTT0 268 aa20.32■□□□□ 0.84
FNDC1-201ENST00000297267 ARID3AQ99856 593 aa20.31■□□□□ 0.84
FNDC1-201ENST00000297267 CARD11Q9BXL7 1154 aa20.3■□□□□ 0.84
FNDC1-201ENST00000297267 TRIM44Q96DX7 344 aaPredicted RBP20.29■□□□□ 0.84
FNDC1-201ENST00000297267 FTSJ3Q8IY81 847 aaKnown RBP20.28■□□□□ 0.84
FNDC1-201ENST00000297267 NAP1L5Q96NT1 182 aaPredicted RBP20.27■□□□□ 0.84
FNDC1-201ENST00000297267 DNTTIP2Q5QJE6 756 aaKnown RBP20.25■□□□□ 0.83
FNDC1-201ENST00000297267 PTMAP06454 111 aaKnown RBP20.24■□□□□ 0.83
FNDC1-201ENST00000297267 GLIPR1L2Q4G1C9 344 aa20.23■□□□□ 0.83
FNDC1-201ENST00000297267 U2SURPO15042 1029 aaKnown RBP20.23■□□□□ 0.83
FNDC1-201ENST00000297267 NAP1L2Q9ULW6 460 aaPredicted RBP20.22■□□□□ 0.83
FNDC1-201ENST00000297267 APBB1O00213 710 aa20.21■□□□□ 0.83
FNDC1-201ENST00000297267 HAP1P54257 671 aaPredicted RBP20.21■□□□□ 0.83
FNDC1-201ENST00000297267 KNSTRNQ9Y448 316 aa20.21■□□□□ 0.83
FNDC1-201ENST00000297267 ZBTB4Q9P1Z0 1013 aaPredicted RBP20.2■□□□□ 0.82
FNDC1-201ENST00000297267 BECN1Q14457 450 aa20.2■□□□□ 0.82
FNDC1-201ENST00000297267 DDRGK1Q96HY6 314 aa20.18■□□□□ 0.82
FNDC1-201ENST00000297267 MLECQ14165 292 aa20.18■□□□□ 0.82
FNDC1-201ENST00000297267 CCDC180Q9P1Z9 1646 aa20.17■□□□□ 0.82
FNDC1-201ENST00000297267 NOP58Q9Y2X3 529 aaKnown RBP20.16■□□□□ 0.82
FNDC1-201ENST00000297267 EIF4G1Q04637 1599 aaKnown RBP20.12■□□□□ 0.81
FNDC1-201ENST00000297267 NCBP3Q53F19 620 aaKnown RBP20.12■□□□□ 0.81
FNDC1-201ENST00000297267 CFDP1Q9UEE9 299 aaPredicted RBP20.11■□□□□ 0.81
FNDC1-201ENST00000297267 DCAF11Q8TEB1 546 aa20.11■□□□□ 0.81
FNDC1-201ENST00000297267 GOLGA3Q08378 1498 aa20.11■□□□□ 0.81
FNDC1-201ENST00000297267 HSP90AB1P08238 724 aaKnown RBP20.11■□□□□ 0.81
FNDC1-201ENST00000297267 GZF1Q9H116 711 aaPredicted RBP20.09■□□□□ 0.81
FNDC1-201ENST00000297267 STK26Q9P289 416 aa20.08■□□□□ 0.81
FNDC1-201ENST00000297267 NUTM2DQ5VT03 806 aaPredicted RBP20.08■□□□□ 0.8
FNDC1-201ENST00000297267 DEKP35659 375 aaKnown RBP20.07■□□□□ 0.8
FNDC1-201ENST00000297267 CDK11BP21127 795 aaKnown RBP20.07■□□□□ 0.8
FNDC1-201ENST00000297267 PLEKHD1A6NEE1 506 aa20.06■□□□□ 0.8
FNDC1-201ENST00000297267 POGKQ9P215 609 aa20.06■□□□□ 0.8
FNDC1-201ENST00000297267 OS9Q13438 667 aaPredicted RBP20.06■□□□□ 0.8
FNDC1-201ENST00000297267 BAZ1BQ9UIG0 1483 aaKnown RBP20.05■□□□□ 0.8
FNDC1-201ENST00000297267 MAPK8IP3Q9UPT6 1336 aa20.04■□□□□ 0.8
FNDC1-201ENST00000297267 PPP4R2Q9NY27 417 aa20.04■□□□□ 0.8
FNDC1-201ENST00000297267 FOXD4L1Q9NU39 408 aa20.03■□□□□ 0.8
FNDC1-201ENST00000297267 RBM19Q9Y4C8 960 aaKnown RBP20.02■□□□□ 0.8
FNDC1-201ENST00000297267 CFAP53Q96M91 514 aa20.01■□□□□ 0.79
FNDC1-201ENST00000297267 GOLGA6L22H0YM25 854 aa20.01■□□□□ 0.79
FNDC1-201ENST00000297267 NPHP1O15259 732 aa20■□□□□ 0.79
FNDC1-201ENST00000297267 HSPA5P11021 654 aaKnown RBP19.99■□□□□ 0.79
FNDC1-201ENST00000297267 CASC1Q6TDU7 716 aa19.99■□□□□ 0.79
FNDC1-201ENST00000297267 SOGA1O94964 1423 aa19.99■□□□□ 0.79
FNDC1-201ENST00000297267 ERICH6BQ5W0A0 696 aa19.99■□□□□ 0.79
FNDC1-201ENST00000297267 RSF1Q96T23 1441 aaPredicted RBP19.99■□□□□ 0.79
FNDC1-201ENST00000297267 ABCC8Q09428 1581 aa19.98■□□□□ 0.79
FNDC1-201ENST00000297267 KANK4Q5T7N3 995 aaPredicted RBP19.98■□□□□ 0.79
FNDC1-201ENST00000297267 CCDC146Q8IYE0 955 aa19.97■□□□□ 0.79
FNDC1-201ENST00000297267 ZRSR1Q15695 479 aaKnown RBP19.96■□□□□ 0.79
FNDC1-201ENST00000297267 ANO8Q9HCE9 1232 aaPredicted RBP19.96■□□□□ 0.79
FNDC1-201ENST00000297267 SLKQ9H2G2 1235 aaPredicted RBP19.94■□□□□ 0.78
FNDC1-201ENST00000297267 SRPK2P78362 688 aaKnown RBP19.93■□□□□ 0.78
FNDC1-201ENST00000297267 KCNJ4P48050 445 aa19.93■□□□□ 0.78
FNDC1-201ENST00000297267 WRNQ14191 1432 aaPredicted RBP eCLIP19.93■□□□□ 0.78
FNDC1-201ENST00000297267 FGD1P98174 961 aa19.92■□□□□ 0.78
FNDC1-201ENST00000297267 NOL8Q76FK4 1167 aaKnown RBP19.92■□□□□ 0.78
FNDC1-201ENST00000297267 ZNF330Q9Y3S2 320 aaPredicted RBP19.91■□□□□ 0.78
FNDC1-201ENST00000297267 FOXD4L5Q5VV16 416 aaPredicted RBP19.89■□□□□ 0.77
FNDC1-201ENST00000297267 FOXD4L4Q8WXT5 416 aaPredicted RBP19.89■□□□□ 0.77
FNDC1-201ENST00000297267 SLC4A3P48751 1232 aa19.86■□□□□ 0.77
FNDC1-201ENST00000297267 CLSTN1O94985 981 aa19.86■□□□□ 0.77
FNDC1-201ENST00000297267 PAK3O75914 559 aaPredicted RBP19.85■□□□□ 0.77
FNDC1-201ENST00000297267 ISY1Q9ULR0 285 aaKnown RBP19.84■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms