RNA–Protein interactions for RNA: ENST00000296137.6

FYCO1-201, Transcript of FYVE and coiled-coil domain containing 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene FYCO1, Length 8,504 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FYCO1-201ENST00000296137 PKNOX2Q96KN3 472 aa14.49□□□□□ -0.09
FYCO1-201ENST00000296137 PNNQ9H307 717 aaKnown RBP14.49□□□□□ -0.09
FYCO1-201ENST00000296137 IRX6P78412 446 aaPredicted RBP14.47□□□□□ -0.09
FYCO1-201ENST00000296137 GOLGA6L6A8MZA4 724 aa14.45□□□□□ -0.1
FYCO1-201ENST00000296137 FAM9BQ8IZU0 186 aa14.45□□□□□ -0.1
FYCO1-201ENST00000296137 MIER1Q8N108 512 aa14.43□□□□□ -0.1
FYCO1-201ENST00000296137 A0A0U1RQG5 324 aaPredicted RBP14.43□□□□□ -0.1
FYCO1-201ENST00000296137 ZRSR1Q15695 479 aaKnown RBP14.42□□□□□ -0.1
FYCO1-201ENST00000296137 ARID3AQ99856 593 aa14.41□□□□□ -0.1
FYCO1-201ENST00000296137 SUPT16HQ9Y5B9 1047 aaKnown RBP14.4□□□□□ -0.1
FYCO1-201ENST00000296137 APPP05067 770 aa14.4□□□□□ -0.1
FYCO1-201ENST00000296137 NRDCO43847 1150 aa14.37□□□□□ -0.11
FYCO1-201ENST00000296137 RBM19Q9Y4C8 960 aaKnown RBP14.37□□□□□ -0.11
FYCO1-201ENST00000296137 DDX10Q13206 875 aaKnown RBP14.36□□□□□ -0.11
FYCO1-201ENST00000296137 SETQ01105 290 aaPredicted RBP14.34□□□□□ -0.11
FYCO1-201ENST00000296137 MYH16Q9H6N6 1097 aa14.31□□□□□ -0.12
FYCO1-201ENST00000296137 TMC1Q8TDI8 760 aa14.31□□□□□ -0.12
FYCO1-201ENST00000296137 PLCB2Q00722 1185 aa14.3□□□□□ -0.12
FYCO1-201ENST00000296137 PPP4R2Q9NY27 417 aa14.28□□□□□ -0.12
FYCO1-201ENST00000296137 KIAA2012Q0VF49 1180 aa14.27□□□□□ -0.12
FYCO1-201ENST00000296137 TONSLQ96HA7 1378 aa14.27□□□□□ -0.13
FYCO1-201ENST00000296137 SALL2Q9Y467 1007 aaPredicted RBP14.25□□□□□ -0.13
FYCO1-201ENST00000296137 CASC1Q6TDU7 716 aa14.25□□□□□ -0.13
FYCO1-201ENST00000296137 TIMELESSQ9UNS1 1208 aa14.24□□□□□ -0.13
FYCO1-201ENST00000296137 GOLGA6L1Q8N7Z2 621 aa14.24□□□□□ -0.13
FYCO1-201ENST00000296137 MRS2Q9HD23 443 aa14.23□□□□□ -0.13
FYCO1-201ENST00000296137 HSP90AB1P08238 724 aaKnown RBP14.22□□□□□ -0.13
FYCO1-201ENST00000296137 DRC7Q8IY82 874 aa14.22□□□□□ -0.13
FYCO1-201ENST00000296137 ZNF771Q7L3S4 317 aaPredicted RBP14.19□□□□□ -0.14
FYCO1-201ENST00000296137 GOLGA6L3A6NEY3 463 aa14.18□□□□□ -0.14
FYCO1-201ENST00000296137 TPRNQ4KMQ1 711 aa14.18□□□□□ -0.14
FYCO1-201ENST00000296137 USP35Q9P2H5 1018 aa14.18□□□□□ -0.14
FYCO1-201ENST00000296137 WDR43Q15061 677 aaKnown RBP eCLIP14.17□□□□□ -0.14
FYCO1-201ENST00000296137 HSCBQ8IWL3 235 aa14.15□□□□□ -0.14
FYCO1-201ENST00000296137 ESF1Q9H501 851 aaKnown RBP14.14□□□□□ -0.15
FYCO1-201ENST00000296137 ZBTB7CA1YPR0 619 aa14.11□□□□□ -0.15
FYCO1-201ENST00000296137 GBP4Q96PP9 640 aa14.11□□□□□ -0.15
FYCO1-201ENST00000296137 TSHZ2Q9NRE2 1034 aa14.1□□□□□ -0.15
FYCO1-201ENST00000296137 GZF1Q9H116 711 aaPredicted RBP14.1□□□□□ -0.15
FYCO1-201ENST00000296137 IPO9Q96P70 1041 aaKnown RBP14.09□□□□□ -0.15
FYCO1-201ENST00000296137 NOM1Q5C9Z4 860 aaKnown RBP14.08□□□□□ -0.15
FYCO1-201ENST00000296137 FBLN2P98095 1184 aa14.08□□□□□ -0.16
FYCO1-201ENST00000296137 B4GALNT3Q6L9W6 998 aa14.08□□□□□ -0.16
FYCO1-201ENST00000296137 NOC3LQ8WTT2 800 aaKnown RBP14.06□□□□□ -0.16
FYCO1-201ENST00000296137 ANO8Q9HCE9 1232 aaPredicted RBP14.05□□□□□ -0.16
FYCO1-201ENST00000296137 MTERF4Q7Z6M4 381 aaKnown RBP14.05□□□□□ -0.16
FYCO1-201ENST00000296137 SYAP1Q96A49 352 aaPredicted RBP14.05□□□□□ -0.16
FYCO1-201ENST00000296137 GSE1Q14687 1217 aa14.04□□□□□ -0.16
FYCO1-201ENST00000296137 GOLGA6L4A6NEF3 574 aa14.03□□□□□ -0.16
FYCO1-201ENST00000296137 RGS3P49796 1198 aa14.03□□□□□ -0.16
FYCO1-201ENST00000296137 TEX35Q5T0J7 233 aa14.03□□□□□ -0.16
FYCO1-201ENST00000296137 HTATSF1O43719 755 aaKnown RBP14.03□□□□□ -0.16
FYCO1-201ENST00000296137 MAP7D2Q96T17 732 aa14.02□□□□□ -0.17
FYCO1-201ENST00000296137 FTSJ3Q8IY81 847 aaKnown RBP14□□□□□ -0.17
FYCO1-201ENST00000296137 FAM13BQ9NYF5 915 aa13.99□□□□□ -0.17
FYCO1-201ENST00000296137 SPRYD3Q8NCJ5 442 aa13.99□□□□□ -0.17
FYCO1-201ENST00000296137 CCDC66A2RUB6 948 aa13.97□□□□□ -0.17
FYCO1-201ENST00000296137 GPS2Q13227 327 aa13.97□□□□□ -0.17
FYCO1-201ENST00000296137 STAG3Q9UJ98 1225 aa13.97□□□□□ -0.17
FYCO1-201ENST00000296137 PHF14O94880 888 aa13.96□□□□□ -0.17
FYCO1-201ENST00000296137 PDZRN4Q6ZMN7 1036 aaPredicted RBP13.96□□□□□ -0.17
FYCO1-201ENST00000296137 PDE4CQ08493 712 aa13.96□□□□□ -0.18
FYCO1-201ENST00000296137 TAF3Q5VWG9 929 aa13.93□□□□□ -0.18
FYCO1-201ENST00000296137 CSPP1Q1MSJ5 1256 aa13.92□□□□□ -0.18
FYCO1-201ENST00000296137 CWC15Q9P013 229 aaKnown RBP13.92□□□□□ -0.18
FYCO1-201ENST00000296137 SLKQ9H2G2 1235 aaPredicted RBP13.91□□□□□ -0.18
FYCO1-201ENST00000296137 CFAP44Q96MT7 982 aa13.91□□□□□ -0.18
FYCO1-201ENST00000296137 DDX11L8A8MPP1 907 aa13.9□□□□□ -0.18
FYCO1-201ENST00000296137 UBE2Q2Q8WVN8 375 aa13.9□□□□□ -0.18
FYCO1-201ENST00000296137 TCERG1O14776 1098 aaKnown RBP13.9□□□□□ -0.18
FYCO1-201ENST00000296137 RRP9O43818 475 aaKnown RBP13.89□□□□□ -0.19
FYCO1-201ENST00000296137 FANCIQ9NVI1 1328 aa13.88□□□□□ -0.19
FYCO1-201ENST00000296137 TPM2P07951 284 aa13.88□□□□□ -0.19
FYCO1-201ENST00000296137 ABCC9O60706 1549 aa13.88□□□□□ -0.19
FYCO1-201ENST00000296137 FAM43AQ8N2R8 423 aa13.88□□□□□ -0.19
FYCO1-201ENST00000296137 TPM4P67936 248 aa13.88□□□□□ -0.19
FYCO1-201ENST00000296137 MCCP23508 829 aa13.87□□□□□ -0.19
FYCO1-201ENST00000296137 PLPPR3Q6T4P5 718 aa13.87□□□□□ -0.19
FYCO1-201ENST00000296137 EIF4G2P78344 907 aaKnown RBP eCLIP13.86□□□□□ -0.19
FYCO1-201ENST00000296137 CALD1Q05682 793 aaKnown RBP13.86□□□□□ -0.19
FYCO1-201ENST00000296137 RDXP35241 583 aaKnown RBP13.86□□□□□ -0.19
FYCO1-201ENST00000296137 STK11IPQ8N1F8 1099 aa13.86□□□□□ -0.19
FYCO1-201ENST00000296137 CHMP4BQ9H444 224 aaKnown RBP13.86□□□□□ -0.19
FYCO1-201ENST00000296137 PATL2C9JE40 543 aaKnown RBP13.83□□□□□ -0.19
FYCO1-201ENST00000296137 FGD1P98174 961 aa13.83□□□□□ -0.2
FYCO1-201ENST00000296137 HIRIP3Q9BW71 556 aaPredicted RBP13.83□□□□□ -0.2
FYCO1-201ENST00000296137 NPM1P06748 294 aaKnown RBP eCLIP13.82□□□□□ -0.2
FYCO1-201ENST00000296137 RRP12Q5JTH9 1297 aaKnown RBP13.82□□□□□ -0.2
FYCO1-201ENST00000296137 MS4A1P11836 297 aa13.81□□□□□ -0.2
FYCO1-201ENST00000296137 PABPN1Q86U42 306 aaKnown RBP eCLIP13.81□□□□□ -0.2
FYCO1-201ENST00000296137 TAF7LQ5H9L4 462 aa13.8□□□□□ -0.2
FYCO1-201ENST00000296137 SKOR2Q2VWA4 1001 aaPredicted RBP13.8□□□□□ -0.2
FYCO1-201ENST00000296137 TULP1O00294 542 aaPredicted RBP13.8□□□□□ -0.2
FYCO1-201ENST00000296137 KCNJ4P48050 445 aa13.78□□□□□ -0.2
FYCO1-201ENST00000296137 CCDC70Q6NSX1 233 aa13.77□□□□□ -0.21
FYCO1-201ENST00000296137 A0A0G2JS52 829 aa13.76□□□□□ -0.21
FYCO1-201ENST00000296137 ZNF777Q9ULD5 760 aaPredicted RBP13.76□□□□□ -0.21
FYCO1-201ENST00000296137 CHGAP10645 457 aaKnown RBP13.76□□□□□ -0.21
FYCO1-201ENST00000296137 CCDC191Q8NCU4 936 aa13.74□□□□□ -0.21
FYCO1-201ENST00000296137 H0YHG0 523 aa13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 281.3 ms