RNA–Protein interactions for RNA: ENST00000295890.8

COX18-201, Transcript of cytochrome c oxidase assembly factor COX18, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene COX18, Length 6,846 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COX18-201ENST00000295890 SENP3-EIF4A1A0A087X0R7 540 aa16.59■□□□□ 0.25
COX18-201ENST00000295890 TMC1Q8TDI8 760 aa16.59■□□□□ 0.25
COX18-201ENST00000295890 RRP7BPQ9NSQ0 103 aa16.59■□□□□ 0.25
COX18-201ENST00000295890 LMOD2Q6P5Q4 547 aa16.57■□□□□ 0.24
COX18-201ENST00000295890 DDX10Q13206 875 aaKnown RBP16.57■□□□□ 0.24
COX18-201ENST00000295890 TPRNQ4KMQ1 711 aa16.55■□□□□ 0.24
COX18-201ENST00000295890 UPF2Q9HAU5 1272 aaKnown RBP16.54■□□□□ 0.24
COX18-201ENST00000295890 RGL3Q3MIN7 710 aa16.54■□□□□ 0.24
COX18-201ENST00000295890 TULP1O00294 542 aaPredicted RBP16.53■□□□□ 0.24
COX18-201ENST00000295890 HIRIP3Q9BW71 556 aaPredicted RBP16.49■□□□□ 0.23
COX18-201ENST00000295890 PPM1GO15355 546 aaPredicted RBP16.49■□□□□ 0.23
COX18-201ENST00000295890 MLECQ14165 292 aa16.48■□□□□ 0.23
COX18-201ENST00000295890 ZCCHC6Q5VYS8 1495 aaKnown RBP16.47■□□□□ 0.23
COX18-201ENST00000295890 GOLGA6L2Q8N9W4 650 aaPredicted RBP16.47■□□□□ 0.23
COX18-201ENST00000295890 MYH16Q9H6N6 1097 aa16.46■□□□□ 0.22
COX18-201ENST00000295890 CCDC136Q96JN2 1154 aa16.45■□□□□ 0.22
COX18-201ENST00000295890 NPHP1O15259 732 aa16.45■□□□□ 0.22
COX18-201ENST00000295890 CFDP1Q9UEE9 299 aaPredicted RBP16.44■□□□□ 0.22
COX18-201ENST00000295890 TAOK2Q9UL54 1235 aa16.42■□□□□ 0.22
COX18-201ENST00000295890 BAZ1BQ9UIG0 1483 aaKnown RBP16.42■□□□□ 0.22
COX18-201ENST00000295890 MRS2Q9HD23 443 aa16.41■□□□□ 0.22
COX18-201ENST00000295890 RSF1Q96T23 1441 aaPredicted RBP16.4■□□□□ 0.22
COX18-201ENST00000295890 POGKQ9P215 609 aa16.39■□□□□ 0.22
COX18-201ENST00000295890 CLIP1P30622 1438 aa16.39■□□□□ 0.21
COX18-201ENST00000295890 CDK11BP21127 795 aaKnown RBP16.38■□□□□ 0.21
COX18-201ENST00000295890 GLIPR1L2Q4G1C9 344 aa16.38■□□□□ 0.21
COX18-201ENST00000295890 CCDC180Q9P1Z9 1646 aa16.38■□□□□ 0.21
COX18-201ENST00000295890 CFAP53Q96M91 514 aa16.33■□□□□ 0.2
COX18-201ENST00000295890 EIF4G2P78344 907 aaKnown RBP eCLIP16.32■□□□□ 0.2
COX18-201ENST00000295890 LAS1LQ9Y4W2 734 aaKnown RBP16.31■□□□□ 0.2
COX18-201ENST00000295890 NCLP19338 710 aaKnown RBP16.3■□□□□ 0.2
COX18-201ENST00000295890 EIF4G1Q04637 1599 aaKnown RBP16.29■□□□□ 0.2
COX18-201ENST00000295890 KNSTRNQ9Y448 316 aa16.27■□□□□ 0.2
COX18-201ENST00000295890 SOX12O15370 315 aa16.27■□□□□ 0.2
COX18-201ENST00000295890 TNNT2P45379 298 aaPredicted RBP16.26■□□□□ 0.19
COX18-201ENST00000295890 RTN4Q9NQC3 1192 aaKnown RBP16.25■□□□□ 0.19
COX18-201ENST00000295890 KIF27Q86VH2 1401 aa16.25■□□□□ 0.19
COX18-201ENST00000295890 NEUROD2Q15784 382 aa16.25■□□□□ 0.19
COX18-201ENST00000295890 CDCA8Q53HL2 280 aa16.25■□□□□ 0.19
COX18-201ENST00000295890 CARD11Q9BXL7 1154 aa16.24■□□□□ 0.19
COX18-201ENST00000295890 NCBP3Q53F19 620 aaKnown RBP16.24■□□□□ 0.19
COX18-201ENST00000295890 WRNQ14191 1432 aaPredicted RBP eCLIP16.23■□□□□ 0.19
COX18-201ENST00000295890 MAPK8IP3Q9UPT6 1336 aa16.22■□□□□ 0.19
COX18-201ENST00000295890 GOLGA3Q08378 1498 aa16.22■□□□□ 0.19
COX18-201ENST00000295890 NACADO15069 1562 aa16.2■□□□□ 0.18
COX18-201ENST00000295890 HDGFP51858 240 aaKnown RBP16.2■□□□□ 0.18
COX18-201ENST00000295890 TRIM44Q96DX7 344 aaPredicted RBP16.19■□□□□ 0.18
COX18-201ENST00000295890 GGT6Q6P531 493 aa16.19■□□□□ 0.18
COX18-201ENST00000295890 SAFB2Q14151 953 aaKnown RBP eCLIP16.18■□□□□ 0.18
COX18-201ENST00000295890 KANK1Q14678 1352 aa16.18■□□□□ 0.18
COX18-201ENST00000295890 CCNB3Q8WWL7 1395 aa16.17■□□□□ 0.18
COX18-201ENST00000295890 MIER1Q8N108 512 aa16.16■□□□□ 0.18
COX18-201ENST00000295890 NUDCQ9Y266 331 aa16.16■□□□□ 0.18
COX18-201ENST00000295890 U2SURPO15042 1029 aaKnown RBP16.16■□□□□ 0.18
COX18-201ENST00000295890 DNTTIP2Q5QJE6 756 aaKnown RBP16.15■□□□□ 0.18
COX18-201ENST00000295890 FTSJ3Q8IY81 847 aaKnown RBP16.15■□□□□ 0.18
COX18-201ENST00000295890 PTMAP06454 111 aaKnown RBP16.15■□□□□ 0.18
COX18-201ENST00000295890 AMER1Q5JTC6 1135 aaPredicted RBP16.15■□□□□ 0.18
COX18-201ENST00000295890 PLCB2Q00722 1185 aa16.14■□□□□ 0.17
COX18-201ENST00000295890 GOLGA2Q08379 1002 aa16.14■□□□□ 0.17
COX18-201ENST00000295890 SRPK2P78362 688 aaKnown RBP16.14■□□□□ 0.17
COX18-201ENST00000295890 OS9Q13438 667 aaPredicted RBP16.12■□□□□ 0.17
COX18-201ENST00000295890 CEP162Q5TB80 1403 aa16.11■□□□□ 0.17
COX18-201ENST00000295890 STK26Q9P289 416 aa16.11■□□□□ 0.17
COX18-201ENST00000295890 CCDC9Q9Y3X0 531 aaKnown RBP16.11■□□□□ 0.17
COX18-201ENST00000295890 PAK3O75914 559 aaPredicted RBP16.11■□□□□ 0.17
COX18-201ENST00000295890 CC2D1BQ5T0F9 858 aaKnown RBP16.11■□□□□ 0.17
COX18-201ENST00000295890 EEA1Q15075 1411 aa16.08■□□□□ 0.16
COX18-201ENST00000295890 CASC1Q6TDU7 716 aa16.08■□□□□ 0.16
COX18-201ENST00000295890 CSB-PGBD3P0DP91 1061 aa16.07■□□□□ 0.16
COX18-201ENST00000295890 ZRSR1Q15695 479 aaKnown RBP16.07■□□□□ 0.16
COX18-201ENST00000295890 DCAF1Q9Y4B6 1507 aa16.07■□□□□ 0.16
COX18-201ENST00000295890 DCAF11Q8TEB1 546 aa16.06■□□□□ 0.16
COX18-201ENST00000295890 CUX2O14529 1486 aa16.05■□□□□ 0.16
COX18-201ENST00000295890 BECN1Q14457 450 aa16.05■□□□□ 0.16
COX18-201ENST00000295890 NAP1L5Q96NT1 182 aaPredicted RBP16.05■□□□□ 0.16
COX18-201ENST00000295890 FRAT1Q92837 279 aaPredicted RBP16.04■□□□□ 0.16
COX18-201ENST00000295890 NAP1L2Q9ULW6 460 aaPredicted RBP16.04■□□□□ 0.16
COX18-201ENST00000295890 ZNF330Q9Y3S2 320 aaPredicted RBP16.03■□□□□ 0.16
COX18-201ENST00000295890 CEP164Q9UPV0 1460 aa16.02■□□□□ 0.16
COX18-201ENST00000295890 ISY1Q9ULR0 285 aaKnown RBP16.02■□□□□ 0.15
COX18-201ENST00000295890 CARMIL1Q5VZK9 1371 aa16.01■□□□□ 0.15
COX18-201ENST00000295890 RGS3P49796 1198 aa16.01■□□□□ 0.15
COX18-201ENST00000295890 GOLGA6L22H0YM25 854 aa16.01■□□□□ 0.15
COX18-201ENST00000295890 SUPT16HQ9Y5B9 1047 aaKnown RBP16■□□□□ 0.15
COX18-201ENST00000295890 SIN3AQ96ST3 1273 aa15.99■□□□□ 0.15
COX18-201ENST00000295890 TMF1P82094 1093 aa15.99■□□□□ 0.15
COX18-201ENST00000295890 FGD1P98174 961 aa15.99■□□□□ 0.15
COX18-201ENST00000295890 PNNQ9H307 717 aaKnown RBP15.99■□□□□ 0.15
COX18-201ENST00000295890 CARMIL2Q6F5E8 1435 aa15.98■□□□□ 0.15
COX18-201ENST00000295890 AEBP2Q6ZN18 517 aaPredicted RBP15.98■□□□□ 0.15
COX18-201ENST00000295890 SPRYD3Q8NCJ5 442 aa15.98■□□□□ 0.15
COX18-201ENST00000295890 DDRGK1Q96HY6 314 aa15.98■□□□□ 0.15
COX18-201ENST00000295890 CECR2Q9BXF3 1484 aa15.98■□□□□ 0.15
COX18-201ENST00000295890 RTF1Q92541 710 aaKnown RBP15.97■□□□□ 0.15
COX18-201ENST00000295890 KCNJ4P48050 445 aa15.96■□□□□ 0.15
COX18-201ENST00000295890 CLSTN1O94985 981 aa15.96■□□□□ 0.15
COX18-201ENST00000295890 PDS5BQ9NTI5 1447 aa15.95■□□□□ 0.14
COX18-201ENST00000295890 MORC1Q86VD1 984 aa15.95■□□□□ 0.14
COX18-201ENST00000295890 BAZ1AQ9NRL2 1556 aaPredicted RBP15.95■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms