RNA–Protein interactions for RNA: ENST00000286398.11

SMC2-201, Transcript of structural maintenance of chromosomes 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC2, Length 5,992 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC2-201ENST00000286398 ZRSR1Q15695 479 aaKnown RBP11.94□□□□□ -0.5
SMC2-201ENST00000286398 TPRNQ4KMQ1 711 aa11.93□□□□□ -0.5
SMC2-201ENST00000286398 SUPT16HQ9Y5B9 1047 aaKnown RBP11.92□□□□□ -0.5
SMC2-201ENST00000286398 ARID3AQ99856 593 aa11.91□□□□□ -0.5
SMC2-201ENST00000286398 TNNT3P45378 269 aaPredicted RBP11.91□□□□□ -0.5
SMC2-201ENST00000286398 PLCB2Q00722 1185 aa11.9□□□□□ -0.5
SMC2-201ENST00000286398 HIRIP3Q9BW71 556 aaPredicted RBP11.9□□□□□ -0.5
SMC2-201ENST00000286398 CHGAP10645 457 aaKnown RBP11.9□□□□□ -0.51
SMC2-201ENST00000286398 DCAF1Q9Y4B6 1507 aa11.89□□□□□ -0.51
SMC2-201ENST00000286398 PPP4R2Q9NY27 417 aa11.87□□□□□ -0.51
SMC2-201ENST00000286398 FBLN2P98095 1184 aa11.86□□□□□ -0.51
SMC2-201ENST00000286398 CHAF1AQ13111 956 aaPredicted RBP11.84□□□□□ -0.51
SMC2-201ENST00000286398 MSNP26038 577 aaKnown RBP11.84□□□□□ -0.51
SMC2-201ENST00000286398 L1TD1Q5T7N2 865 aaKnown RBP11.84□□□□□ -0.51
SMC2-201ENST00000286398 EIF4G2P78344 907 aaKnown RBP eCLIP11.83□□□□□ -0.51
SMC2-201ENST00000286398 RGS3P49796 1198 aa11.83□□□□□ -0.52
SMC2-201ENST00000286398 NRDCO43847 1150 aa11.82□□□□□ -0.52
SMC2-201ENST00000286398 SENP3-EIF4A1A0A087X0R7 540 aa11.81□□□□□ -0.52
SMC2-201ENST00000286398 KDM2AQ9Y2K7 1162 aa11.81□□□□□ -0.52
SMC2-201ENST00000286398 STAG3Q9UJ98 1225 aa11.81□□□□□ -0.52
SMC2-201ENST00000286398 CASC1Q6TDU7 716 aa11.8□□□□□ -0.52
SMC2-201ENST00000286398 ZBTB7CA1YPR0 619 aa11.8□□□□□ -0.52
SMC2-201ENST00000286398 GOLGA6L6A8MZA4 724 aa11.8□□□□□ -0.52
SMC2-201ENST00000286398 HSP90AB1P08238 724 aaKnown RBP11.79□□□□□ -0.52
SMC2-201ENST00000286398 CHIC2Q9UKJ5 165 aa11.79□□□□□ -0.52
SMC2-201ENST00000286398 PNNQ9H307 717 aaKnown RBP11.78□□□□□ -0.52
SMC2-201ENST00000286398 RBM19Q9Y4C8 960 aaKnown RBP11.78□□□□□ -0.52
SMC2-201ENST00000286398 B4GALNT3Q6L9W6 998 aa11.78□□□□□ -0.52
SMC2-201ENST00000286398 VSIG10Q8N0Z9 540 aa11.77□□□□□ -0.53
SMC2-201ENST00000286398 TULP1O00294 542 aaPredicted RBP11.76□□□□□ -0.53
SMC2-201ENST00000286398 FTSJ3Q8IY81 847 aaKnown RBP11.76□□□□□ -0.53
SMC2-201ENST00000286398 CALRP27797 417 aaKnown RBP11.75□□□□□ -0.53
SMC2-201ENST00000286398 ESF1Q9H501 851 aaKnown RBP11.75□□□□□ -0.53
SMC2-201ENST00000286398 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.73□□□□□ -0.533e-6■■■■□ 19.3
SMC2-201ENST00000286398 HSCBQ8IWL3 235 aa11.71□□□□□ -0.53
SMC2-201ENST00000286398 GOLGA6L4A6NEF3 574 aa11.71□□□□□ -0.54
SMC2-201ENST00000286398 HSP90AA2PQ14568 343 aaPredicted RBP11.69□□□□□ -0.54
SMC2-201ENST00000286398 DRC7Q8IY82 874 aa11.69□□□□□ -0.54
SMC2-201ENST00000286398 FRAT1Q92837 279 aaPredicted RBP11.68□□□□□ -0.54
SMC2-201ENST00000286398 CFAP53Q96M91 514 aa11.67□□□□□ -0.54
SMC2-201ENST00000286398 KIAA2012Q0VF49 1180 aa11.67□□□□□ -0.54
SMC2-201ENST00000286398 A0A0U1RQG5 324 aaPredicted RBP11.67□□□□□ -0.54
SMC2-201ENST00000286398 FGD1P98174 961 aa11.67□□□□□ -0.54
SMC2-201ENST00000286398 PABPN1Q86U42 306 aaKnown RBP eCLIP11.66□□□□□ -0.54
SMC2-201ENST00000286398 SPRYD3Q8NCJ5 442 aa11.66□□□□□ -0.54
SMC2-201ENST00000286398 TAOK2Q9UL54 1235 aa11.66□□□□□ -0.54
SMC2-201ENST00000286398 NEUROD2Q15784 382 aa11.66□□□□□ -0.54
SMC2-201ENST00000286398 TSPY4P0CV99 314 aa11.65□□□□□ -0.54
SMC2-201ENST00000286398 TSPY10P0CW01 314 aa11.65□□□□□ -0.54
SMC2-201ENST00000286398 GZF1Q9H116 711 aaPredicted RBP11.65□□□□□ -0.54
SMC2-201ENST00000286398 KNSTRNQ9Y448 316 aa11.64□□□□□ -0.55
SMC2-201ENST00000286398 KCNJ4P48050 445 aa11.63□□□□□ -0.55
SMC2-201ENST00000286398 CHMP4BQ9H444 224 aaKnown RBP11.62□□□□□ -0.55
SMC2-201ENST00000286398 A0A0G2JS52 829 aa11.62□□□□□ -0.55
SMC2-201ENST00000286398 MS4A1P11836 297 aa11.61□□□□□ -0.55
SMC2-201ENST00000286398 GBP4Q96PP9 640 aa11.61□□□□□ -0.55
SMC2-201ENST00000286398 NAP1L2Q9ULW6 460 aaPredicted RBP11.6□□□□□ -0.55
SMC2-201ENST00000286398 SLKQ9H2G2 1235 aaPredicted RBP11.6□□□□□ -0.55
SMC2-201ENST00000286398 TSHZ2Q9NRE2 1034 aa11.6□□□□□ -0.55
SMC2-201ENST00000286398 PLPPR3Q6T4P5 718 aa11.6□□□□□ -0.55
SMC2-201ENST00000286398 NOC3LQ8WTT2 800 aaKnown RBP11.6□□□□□ -0.55
SMC2-201ENST00000286398 RRP7BPQ9NSQ0 103 aa11.59□□□□□ -0.55
SMC2-201ENST00000286398 GOLGA6L3A6NEY3 463 aa11.59□□□□□ -0.55
SMC2-201ENST00000286398 MAPK8IP3Q9UPT6 1336 aa11.59□□□□□ -0.55
SMC2-201ENST00000286398 CDCA8Q53HL2 280 aa11.59□□□□□ -0.55
SMC2-201ENST00000286398 MTUS2Q5JR59 1369 aa11.59□□□□□ -0.55
SMC2-201ENST00000286398 PTMSP20962 102 aa11.58□□□□□ -0.55
SMC2-201ENST00000286398 NCBP3Q53F19 620 aaKnown RBP11.58□□□□□ -0.56
SMC2-201ENST00000286398 SETQ01105 290 aaPredicted RBP11.57□□□□□ -0.56
SMC2-201ENST00000286398 RSPH6AQ9H0K4 717 aa11.57□□□□□ -0.56
SMC2-201ENST00000286398 RGL3Q3MIN7 710 aa11.56□□□□□ -0.56
SMC2-201ENST00000286398 GOLGA6L1Q8N7Z2 621 aa11.56□□□□□ -0.56
SMC2-201ENST00000286398 MCCP23508 829 aa11.56□□□□□ -0.56
SMC2-201ENST00000286398 OS9Q13438 667 aaPredicted RBP11.56□□□□□ -0.56
SMC2-201ENST00000286398 APPP05067 770 aa11.56□□□□□ -0.56
SMC2-201ENST00000286398 PODXL2Q9NZ53 605 aa11.55□□□□□ -0.56
SMC2-201ENST00000286398 NUDCQ9Y266 331 aa11.55□□□□□ -0.56
SMC2-201ENST00000286398 CARD11Q9BXL7 1154 aa11.55□□□□□ -0.56
SMC2-201ENST00000286398 C14orf37Q86TY3 774 aa11.55□□□□□ -0.56
SMC2-201ENST00000286398 PLEKHG5O94827 1062 aa11.54□□□□□ -0.56
SMC2-201ENST00000286398 IPO9Q96P70 1041 aaKnown RBP11.54□□□□□ -0.56
SMC2-201ENST00000286398 TIMELESSQ9UNS1 1208 aa11.54□□□□□ -0.56
SMC2-201ENST00000286398 TCERG1O14776 1098 aaKnown RBP11.53□□□□□ -0.56
SMC2-201ENST00000286398 SYAP1Q96A49 352 aaPredicted RBP11.53□□□□□ -0.56
SMC2-201ENST00000286398 CFAP44Q96MT7 982 aa11.53□□□□□ -0.56
SMC2-201ENST00000286398 SENP3Q9H4L4 574 aaPredicted RBP11.51□□□□□ -0.57
SMC2-201ENST00000286398 ZNF771Q7L3S4 317 aaPredicted RBP11.51□□□□□ -0.57
SMC2-201ENST00000286398 PKNOX2Q96KN3 472 aa11.51□□□□□ -0.57
SMC2-201ENST00000286398 CCER2I3L3R5 266 aa11.51□□□□□ -0.57
SMC2-201ENST00000286398 CLIP1P30622 1438 aa11.5□□□□□ -0.57
SMC2-201ENST00000286398 CC2D1BQ5T0F9 858 aaKnown RBP11.49□□□□□ -0.57
SMC2-201ENST00000286398 PATL2C9JE40 543 aaKnown RBP11.49□□□□□ -0.57
SMC2-201ENST00000286398 CALD1Q05682 793 aaKnown RBP11.49□□□□□ -0.57
SMC2-201ENST00000286398 SIN3AQ96ST3 1273 aa11.48□□□□□ -0.57
SMC2-201ENST00000286398 NPM1P06748 294 aaKnown RBP eCLIP11.48□□□□□ -0.57
SMC2-201ENST00000286398 U2SURPO15042 1029 aaKnown RBP11.47□□□□□ -0.57
SMC2-201ENST00000286398 USP35Q9P2H5 1018 aa11.47□□□□□ -0.57
SMC2-201ENST00000286398 HTATSF1O43719 755 aaKnown RBP11.46□□□□□ -0.58
SMC2-201ENST00000286398 PPP1R15AO75807 674 aaPredicted RBP11.46□□□□□ -0.58
SMC2-201ENST00000286398 GNL2Q13823 731 aaKnown RBP11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms