RNA–Protein interactions for RNA: ENST00000277541.6

NOTCH1-201, Transcript of notch 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NOTCH1, Length 9,371 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOTCH1-201ENST00000277541 ESF1Q9H501 851 aaKnown RBP17.88■□□□□ 0.45
NOTCH1-201ENST00000277541 EIF4G2P78344 907 aaKnown RBP eCLIP17.86■□□□□ 0.45
NOTCH1-201ENST00000277541 ZCCHC6Q5VYS8 1495 aaKnown RBP17.85■□□□□ 0.45
NOTCH1-201ENST00000277541 CLIP1P30622 1438 aa17.85■□□□□ 0.45
NOTCH1-201ENST00000277541 CASC1Q6TDU7 716 aa17.84■□□□□ 0.45
NOTCH1-201ENST00000277541 MYO15BQ96JP2 1530 aa17.84■□□□□ 0.45
NOTCH1-201ENST00000277541 STAG3Q9UJ98 1225 aa17.84■□□□□ 0.45
NOTCH1-201ENST00000277541 RTN4Q9NQC3 1192 aaKnown RBP17.82■□□□□ 0.44
NOTCH1-201ENST00000277541 PPP4R2Q9NY27 417 aa17.8■□□□□ 0.44
NOTCH1-201ENST00000277541 ZRSR1Q15695 479 aaKnown RBP17.8■□□□□ 0.44
NOTCH1-201ENST00000277541 SUPT16HQ9Y5B9 1047 aaKnown RBP17.79■□□□□ 0.44
NOTCH1-201ENST00000277541 LAS1LQ9Y4W2 734 aaKnown RBP17.78■□□□□ 0.44
NOTCH1-201ENST00000277541 CHGAP10645 457 aaKnown RBP17.76■□□□□ 0.43
NOTCH1-201ENST00000277541 GOLGA3Q08378 1498 aa17.76■□□□□ 0.43
NOTCH1-201ENST00000277541 MTUS2Q5JR59 1369 aa17.76■□□□□ 0.43
NOTCH1-201ENST00000277541 CEP162Q5TB80 1403 aa17.73■□□□□ 0.43
NOTCH1-201ENST00000277541 L1TD1Q5T7N2 865 aaKnown RBP17.73■□□□□ 0.43
NOTCH1-201ENST00000277541 GOLGA6L6A8MZA4 724 aa17.73■□□□□ 0.43
NOTCH1-201ENST00000277541 DEKP35659 375 aaKnown RBP17.73■□□□□ 0.43
NOTCH1-201ENST00000277541 EEA1Q15075 1411 aa17.72■□□□□ 0.43
NOTCH1-201ENST00000277541 CHAF1AQ13111 956 aaPredicted RBP17.72■□□□□ 0.43
NOTCH1-201ENST00000277541 FTSJ3Q8IY81 847 aaKnown RBP17.71■□□□□ 0.43
NOTCH1-201ENST00000277541 HIRIP3Q9BW71 556 aaPredicted RBP17.71■□□□□ 0.43
NOTCH1-201ENST00000277541 CHIC2Q9UKJ5 165 aa17.71■□□□□ 0.43
NOTCH1-201ENST00000277541 KDM2AQ9Y2K7 1162 aa17.68■□□□□ 0.42
NOTCH1-201ENST00000277541 MSNP26038 577 aaKnown RBP17.67■□□□□ 0.42
NOTCH1-201ENST00000277541 RSF1Q96T23 1441 aaPredicted RBP17.66■□□□□ 0.42
NOTCH1-201ENST00000277541 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.63■□□□□ 0.41
NOTCH1-201ENST00000277541 TSPY4P0CV99 314 aa17.63■□□□□ 0.41
NOTCH1-201ENST00000277541 TSPY10P0CW01 314 aa17.63■□□□□ 0.41
NOTCH1-201ENST00000277541 NRDCO43847 1150 aa17.62■□□□□ 0.41
NOTCH1-201ENST00000277541 HSP90AB1P08238 724 aaKnown RBP17.62■□□□□ 0.41
NOTCH1-201ENST00000277541 CDCA8Q53HL2 280 aa17.6■□□□□ 0.41
NOTCH1-201ENST00000277541 KNSTRNQ9Y448 316 aa17.6■□□□□ 0.41
NOTCH1-201ENST00000277541 CFAP53Q96M91 514 aa17.6■□□□□ 0.41
NOTCH1-201ENST00000277541 CHMP4BQ9H444 224 aaKnown RBP17.59■□□□□ 0.41
NOTCH1-201ENST00000277541 RBM19Q9Y4C8 960 aaKnown RBP17.58■□□□□ 0.4
NOTCH1-201ENST00000277541 NPM1P06748 294 aaKnown RBP eCLIP17.58■□□□□ 0.4
NOTCH1-201ENST00000277541 HSCBQ8IWL3 235 aa17.58■□□□□ 0.4
NOTCH1-201ENST00000277541 RGS3P49796 1198 aa17.57■□□□□ 0.4
NOTCH1-201ENST00000277541 PTMSP20962 102 aa17.54■□□□□ 0.4
NOTCH1-201ENST00000277541 MS4A1P11836 297 aa17.54■□□□□ 0.4
NOTCH1-201ENST00000277541 B4GALNT3Q6L9W6 998 aa17.53■□□□□ 0.4
NOTCH1-201ENST00000277541 CEP164Q9UPV0 1460 aa17.53■□□□□ 0.4
NOTCH1-201ENST00000277541 PLCB2Q00722 1185 aa17.52■□□□□ 0.39
NOTCH1-201ENST00000277541 TPRNQ4KMQ1 711 aa17.51■□□□□ 0.39
NOTCH1-201ENST00000277541 RRP7BPQ9NSQ0 103 aa17.5■□□□□ 0.39
NOTCH1-201ENST00000277541 CCER2I3L3R5 266 aa17.48■□□□□ 0.39
NOTCH1-201ENST00000277541 CFAP44Q96MT7 982 aa17.45■□□□□ 0.38
NOTCH1-201ENST00000277541 TNIKQ9UKE5 1360 aa17.45■□□□□ 0.38
NOTCH1-201ENST00000277541 MAPK8IP3Q9UPT6 1336 aa17.44■□□□□ 0.38
NOTCH1-201ENST00000277541 RB1CC1Q8TDY2 1594 aa17.44■□□□□ 0.38
NOTCH1-201ENST00000277541 CARD11Q9BXL7 1154 aa17.44■□□□□ 0.38
NOTCH1-201ENST00000277541 PNNQ9H307 717 aaKnown RBP17.43■□□□□ 0.38
NOTCH1-201ENST00000277541 GOLGA6L4A6NEF3 574 aa17.42■□□□□ 0.38
NOTCH1-201ENST00000277541 GBP4Q96PP9 640 aa17.42■□□□□ 0.38
NOTCH1-201ENST00000277541 DRC7Q8IY82 874 aa17.42■□□□□ 0.38
NOTCH1-201ENST00000277541 FRAT1Q92837 279 aaPredicted RBP17.42■□□□□ 0.38
NOTCH1-201ENST00000277541 KIAA2012Q0VF49 1180 aa17.4■□□□□ 0.38
NOTCH1-201ENST00000277541 MCCP23508 829 aa17.4■□□□□ 0.38
NOTCH1-201ENST00000277541 ZBTB4Q9P1Z0 1013 aaPredicted RBP17.39■□□□□ 0.37
NOTCH1-201ENST00000277541 PLPPR3Q6T4P5 718 aa17.39■□□□□ 0.37
NOTCH1-201ENST00000277541 SENP3-EIF4A1A0A087X0R7 540 aa17.37■□□□□ 0.37
NOTCH1-201ENST00000277541 FGD1P98174 961 aa17.36■□□□□ 0.37
NOTCH1-201ENST00000277541 NUDCQ9Y266 331 aa17.36■□□□□ 0.37
NOTCH1-201ENST00000277541 ARID4BQ4LE39 1312 aaPredicted RBP17.36■□□□□ 0.37
NOTCH1-201ENST00000277541 PPP1R15AO75807 674 aaPredicted RBP17.35■□□□□ 0.37
NOTCH1-201ENST00000277541 CCNB3Q8WWL7 1395 aa17.35■□□□□ 0.37
NOTCH1-201ENST00000277541 AMER1Q5JTC6 1135 aaPredicted RBP17.34■□□□□ 0.37
NOTCH1-201ENST00000277541 SYAP1Q96A49 352 aaPredicted RBP17.34■□□□□ 0.37
NOTCH1-201ENST00000277541 RSPH6AQ9H0K4 717 aa17.34■□□□□ 0.37
NOTCH1-201ENST00000277541 KCNJ4P48050 445 aa17.34■□□□□ 0.37
NOTCH1-201ENST00000277541 TCERG1O14776 1098 aaKnown RBP17.33■□□□□ 0.37
NOTCH1-201ENST00000277541 IPO9Q96P70 1041 aaKnown RBP17.33■□□□□ 0.36
NOTCH1-201ENST00000277541 TIMELESSQ9UNS1 1208 aa17.33■□□□□ 0.36
NOTCH1-201ENST00000277541 NEUROD2Q15784 382 aa17.32■□□□□ 0.36
NOTCH1-201ENST00000277541 CHMP7Q8WUX9 453 aaPredicted RBP17.32■□□□□ 0.36
NOTCH1-201ENST00000277541 WRNQ14191 1432 aaPredicted RBP eCLIP17.32■□□□□ 0.361e-6■■■■■ 58.5
NOTCH1-201ENST00000277541 KIF27Q86VH2 1401 aa17.32■□□□□ 0.36
NOTCH1-201ENST00000277541 C14orf37Q86TY3 774 aa17.32■□□□□ 0.36
NOTCH1-201ENST00000277541 FHAD1B1AJZ9 1412 aa17.32■□□□□ 0.36
NOTCH1-201ENST00000277541 GOLGA6L3A6NEY3 463 aa17.31■□□□□ 0.36
NOTCH1-201ENST00000277541 SPRYD3Q8NCJ5 442 aa17.31■□□□□ 0.36
NOTCH1-201ENST00000277541 TNNT3P45378 269 aaPredicted RBP17.3■□□□□ 0.36
NOTCH1-201ENST00000277541 OS9Q13438 667 aaPredicted RBP17.3■□□□□ 0.36
NOTCH1-201ENST00000277541 A0A0G2JS52 829 aa17.29■□□□□ 0.36
NOTCH1-201ENST00000277541 CC2D1BQ5T0F9 858 aaKnown RBP17.29■□□□□ 0.36
NOTCH1-201ENST00000277541 USP35Q9P2H5 1018 aa17.29■□□□□ 0.36
NOTCH1-201ENST00000277541 RGL3Q3MIN7 710 aa17.29■□□□□ 0.36
NOTCH1-201ENST00000277541 TSHZ2Q9NRE2 1034 aa17.28■□□□□ 0.36
NOTCH1-201ENST00000277541 HSP90AA2PQ14568 343 aaPredicted RBP17.27■□□□□ 0.36
NOTCH1-201ENST00000277541 KTN1Q86UP2 1357 aaKnown RBP17.26■□□□□ 0.35
NOTCH1-201ENST00000277541 GZF1Q9H116 711 aaPredicted RBP17.26■□□□□ 0.35
NOTCH1-201ENST00000277541 ZBTB7CA1YPR0 619 aa17.26■□□□□ 0.35
NOTCH1-201ENST00000277541 PLEKHD1A6NEE1 506 aa17.25■□□□□ 0.35
NOTCH1-201ENST00000277541 SIN3AQ96ST3 1273 aa17.24■□□□□ 0.35
NOTCH1-201ENST00000277541 SETD5Q9C0A6 1442 aa17.24■□□□□ 0.35
NOTCH1-201ENST00000277541 ARHGAP35Q9NRY4 1499 aa17.24■□□□□ 0.35
NOTCH1-201ENST00000277541 NAP1L2Q9ULW6 460 aaPredicted RBP17.23■□□□□ 0.35
NOTCH1-201ENST00000277541 ARID3AQ99856 593 aa17.23■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 74.6 ms