RNA–Protein interactions for RNA: ENST00000265909.8

SNX19-201, Transcript of sorting nexin 19, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX19, Length 6,535 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX19-201ENST00000265909 NCLP19338 710 aaKnown RBP19.29■□□□□ 0.68
SNX19-201ENST00000265909 GLIPR1L2Q4G1C9 344 aa19.28■□□□□ 0.68
SNX19-201ENST00000265909 MRS2Q9HD23 443 aa19.27■□□□□ 0.68
SNX19-201ENST00000265909 CSRNP3Q8WYN3 585 aa19.26■□□□□ 0.67
SNX19-201ENST00000265909 PPM1GO15355 546 aaPredicted RBP19.25■□□□□ 0.67
SNX19-201ENST00000265909 PPP1R15AO75807 674 aaPredicted RBP19.22■□□□□ 0.67
SNX19-201ENST00000265909 LAS1LQ9Y4W2 734 aaKnown RBP19.18■□□□□ 0.66
SNX19-201ENST00000265909 KCNH8Q96L42 1107 aa19.18■□□□□ 0.66
SNX19-201ENST00000265909 LMOD2Q6P5Q4 547 aa19.16■□□□□ 0.66
SNX19-201ENST00000265909 ARID4BQ4LE39 1312 aaPredicted RBP19.15■□□□□ 0.66
SNX19-201ENST00000265909 NPHP1O15259 732 aa19.15■□□□□ 0.66
SNX19-201ENST00000265909 RGL3Q3MIN7 710 aa19.14■□□□□ 0.65
SNX19-201ENST00000265909 TRIM44Q96DX7 344 aaPredicted RBP19.12■□□□□ 0.65
SNX19-201ENST00000265909 NEUROD2Q15784 382 aa19.11■□□□□ 0.65
SNX19-201ENST00000265909 RRP7BPQ9NSQ0 103 aa19.11■□□□□ 0.65
SNX19-201ENST00000265909 PTMAP06454 111 aaKnown RBP19.1■□□□□ 0.65
SNX19-201ENST00000265909 TSPY4P0CV99 314 aa19.08■□□□□ 0.65
SNX19-201ENST00000265909 TSPY10P0CW01 314 aa19.08■□□□□ 0.65
SNX19-201ENST00000265909 PLCB2Q00722 1185 aa19.08■□□□□ 0.65
SNX19-201ENST00000265909 ZRSR1Q15695 479 aaKnown RBP19.08■□□□□ 0.64
SNX19-201ENST00000265909 DNTTIP2Q5QJE6 756 aaKnown RBP19.08■□□□□ 0.64
SNX19-201ENST00000265909 TNNT2P45379 298 aaPredicted RBP19.05■□□□□ 0.64
SNX19-201ENST00000265909 RTN4Q9NQC3 1192 aaKnown RBP19.04■□□□□ 0.64
SNX19-201ENST00000265909 NAP1L2Q9ULW6 460 aaPredicted RBP19.04■□□□□ 0.64
SNX19-201ENST00000265909 MIER1Q8N108 512 aa19.02■□□□□ 0.64
SNX19-201ENST00000265909 CLSTN1O94985 981 aa19.01■□□□□ 0.63
SNX19-201ENST00000265909 BECN1Q14457 450 aa19.01■□□□□ 0.63
SNX19-201ENST00000265909 CHMP7Q8WUX9 453 aaPredicted RBP18.99■□□□□ 0.63
SNX19-201ENST00000265909 AMER1Q5JTC6 1135 aaPredicted RBP18.98■□□□□ 0.63
SNX19-201ENST00000265909 FTSJ3Q8IY81 847 aaKnown RBP18.98■□□□□ 0.63
SNX19-201ENST00000265909 GOLGA6L22H0YM25 854 aa18.96■□□□□ 0.63
SNX19-201ENST00000265909 SOX12O15370 315 aa18.96■□□□□ 0.63
SNX19-201ENST00000265909 CASC1Q6TDU7 716 aa18.93■□□□□ 0.62
SNX19-201ENST00000265909 MTUS2Q5JR59 1369 aa18.93■□□□□ 0.62
SNX19-201ENST00000265909 OS9Q13438 667 aaPredicted RBP18.92■□□□□ 0.62
SNX19-201ENST00000265909 FRAT1Q92837 279 aaPredicted RBP18.92■□□□□ 0.62
SNX19-201ENST00000265909 RGS3P49796 1198 aa18.91■□□□□ 0.62
SNX19-201ENST00000265909 DDRGK1Q96HY6 314 aa18.91■□□□□ 0.62
SNX19-201ENST00000265909 ISY1Q9ULR0 285 aaKnown RBP18.9■□□□□ 0.62
SNX19-201ENST00000265909 EIF4G2P78344 907 aaKnown RBP eCLIP18.89■□□□□ 0.62
SNX19-201ENST00000265909 NAP1L5Q96NT1 182 aaPredicted RBP18.89■□□□□ 0.61
SNX19-201ENST00000265909 FGD1P98174 961 aa18.89■□□□□ 0.61
SNX19-201ENST00000265909 SPRYD3Q8NCJ5 442 aa18.87■□□□□ 0.61
SNX19-201ENST00000265909 CFAP53Q96M91 514 aa18.86■□□□□ 0.61
SNX19-201ENST00000265909 GOLGA2Q08379 1002 aa18.86■□□□□ 0.61
SNX19-201ENST00000265909 SUPT16HQ9Y5B9 1047 aaKnown RBP18.85■□□□□ 0.61
SNX19-201ENST00000265909 CC2D1BQ5T0F9 858 aaKnown RBP18.85■□□□□ 0.61
SNX19-201ENST00000265909 KNSTRNQ9Y448 316 aa18.84■□□□□ 0.61
SNX19-201ENST00000265909 KCNJ4P48050 445 aa18.83■□□□□ 0.61
SNX19-201ENST00000265909 SCRIBQ14160 1630 aa18.83■□□□□ 0.6
SNX19-201ENST00000265909 U2SURPO15042 1029 aaKnown RBP18.83■□□□□ 0.6
SNX19-201ENST00000265909 MAPK8IP3Q9UPT6 1336 aa18.82■□□□□ 0.6
SNX19-201ENST00000265909 POGKQ9P215 609 aa18.81■□□□□ 0.6
SNX19-201ENST00000265909 HSP90AB1P08238 724 aaKnown RBP18.8■□□□□ 0.6
SNX19-201ENST00000265909 MLECQ14165 292 aa18.78■□□□□ 0.6
SNX19-201ENST00000265909 CARD11Q9BXL7 1154 aa18.75■□□□□ 0.59
SNX19-201ENST00000265909 ERICH6BQ5W0A0 696 aa18.75■□□□□ 0.59
SNX19-201ENST00000265909 SAFB2Q14151 953 aaKnown RBP eCLIP18.75■□□□□ 0.59
SNX19-201ENST00000265909 APBB1O00213 710 aa18.73■□□□□ 0.59
SNX19-201ENST00000265909 TRHP20396 242 aaPredicted RBP18.72■□□□□ 0.59
SNX19-201ENST00000265909 PDE4CQ08493 712 aa18.71■□□□□ 0.59
SNX19-201ENST00000265909 ZNF330Q9Y3S2 320 aaPredicted RBP18.71■□□□□ 0.59
SNX19-201ENST00000265909 ANO8Q9HCE9 1232 aaPredicted RBP18.7■□□□□ 0.58
SNX19-201ENST00000265909 ARID3AQ99856 593 aa18.7■□□□□ 0.58
SNX19-201ENST00000265909 PLEKHD1A6NEE1 506 aa18.69■□□□□ 0.58
SNX19-201ENST00000265909 ANP32EQ9BTT0 268 aa18.67■□□□□ 0.58
SNX19-201ENST00000265909 GOLGA6L6A8MZA4 724 aa18.67■□□□□ 0.58
SNX19-201ENST00000265909 DRC7Q8IY82 874 aa18.67■□□□□ 0.58
SNX19-201ENST00000265909 GOLGA6L4A6NEF3 574 aa18.66■□□□□ 0.58
SNX19-201ENST00000265909 NUDCQ9Y266 331 aa18.66■□□□□ 0.58
SNX19-201ENST00000265909 PRM3Q9NNZ6 103 aa18.65■□□□□ 0.58
SNX19-201ENST00000265909 B4GALNT3Q6L9W6 998 aa18.63■□□□□ 0.57
SNX19-201ENST00000265909 ZBTB4Q9P1Z0 1013 aaPredicted RBP18.62■□□□□ 0.57
SNX19-201ENST00000265909 CFDP1Q9UEE9 299 aaPredicted RBP18.61■□□□□ 0.57
SNX19-201ENST00000265909 GNL2Q13823 731 aaKnown RBP18.6■□□□□ 0.57
SNX19-201ENST00000265909 SIN3AQ96ST3 1273 aa18.6■□□□□ 0.57
SNX19-201ENST00000265909 CDCA8Q53HL2 280 aa18.58■□□□□ 0.56
SNX19-201ENST00000265909 ZCCHC6Q5VYS8 1495 aaKnown RBP18.58■□□□□ 0.56
SNX19-201ENST00000265909 SRPK2P78362 688 aaKnown RBP18.58■□□□□ 0.56
SNX19-201ENST00000265909 STK26Q9P289 416 aa18.58■□□□□ 0.56
SNX19-201ENST00000265909 PAK3O75914 559 aaPredicted RBP18.57■□□□□ 0.56
SNX19-201ENST00000265909 HSCBQ8IWL3 235 aa18.54■□□□□ 0.56
SNX19-201ENST00000265909 NOP58Q9Y2X3 529 aaKnown RBP18.54■□□□□ 0.56
SNX19-201ENST00000265909 CLIP1P30622 1438 aa18.53■□□□□ 0.56
SNX19-201ENST00000265909 CCDC9Q9Y3X0 531 aaKnown RBP18.52■□□□□ 0.56
SNX19-201ENST00000265909 NRDCO43847 1150 aa18.49■□□□□ 0.55
SNX19-201ENST00000265909 PNNQ9H307 717 aaKnown RBP18.49■□□□□ 0.55
SNX19-201ENST00000265909 GZF1Q9H116 711 aaPredicted RBP18.49■□□□□ 0.55
SNX19-201ENST00000265909 DCAF11Q8TEB1 546 aa18.49■□□□□ 0.55
SNX19-201ENST00000265909 CSB-PGBD3P0DP91 1061 aa18.48■□□□□ 0.55
SNX19-201ENST00000265909 NOC3LQ8WTT2 800 aaKnown RBP18.48■□□□□ 0.55
SNX19-201ENST00000265909 MSNP26038 577 aaKnown RBP18.48■□□□□ 0.55
SNX19-201ENST00000265909 CHAF1AQ13111 956 aaPredicted RBP18.48■□□□□ 0.55
SNX19-201ENST00000265909 RTF1Q92541 710 aaKnown RBP18.48■□□□□ 0.55
SNX19-201ENST00000265909 CHMP3Q9Y3E7 222 aa18.48■□□□□ 0.55
SNX19-201ENST00000265909 CREBRFQ8IUR6 639 aa18.47■□□□□ 0.55
SNX19-201ENST00000265909 HSP90B1P14625 803 aaKnown RBP18.45■□□□□ 0.54
SNX19-201ENST00000265909 PPP4R2Q9NY27 417 aa18.45■□□□□ 0.54
SNX19-201ENST00000265909 MCCP23508 829 aa18.45■□□□□ 0.54
SNX19-201ENST00000265909 MORC1Q86VD1 984 aa18.45■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms