RNA–Protein interactions for RNA: ENST00000263212.9

PPM1F-201, Transcript of protein phosphatase, Mg2+/Mn2+ dependent 1F, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PPM1F, Length 5,143 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPM1F-201ENST00000263212 RRP7BPQ9NSQ0 103 aa19.65■□□□□ 0.74
PPM1F-201ENST00000263212 SLC24A1O60721 1099 aa19.65■□□□□ 0.74
PPM1F-201ENST00000263212 NACADO15069 1562 aa19.64■□□□□ 0.74
PPM1F-201ENST00000263212 KDM2AQ9Y2K7 1162 aa19.64■□□□□ 0.73
PPM1F-201ENST00000263212 KIF27Q86VH2 1401 aa19.63■□□□□ 0.73
PPM1F-201ENST00000263212 CHGAP10645 457 aaKnown RBP19.61■□□□□ 0.73
PPM1F-201ENST00000263212 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.6■□□□□ 0.73
PPM1F-201ENST00000263212 SUPT16HQ9Y5B9 1047 aaKnown RBP19.59■□□□□ 0.73
PPM1F-201ENST00000263212 DDRGK1Q96HY6 314 aa19.57■□□□□ 0.72
PPM1F-201ENST00000263212 BAZ1AQ9NRL2 1556 aaPredicted RBP19.55■□□□□ 0.72
PPM1F-201ENST00000263212 TIMELESSQ9UNS1 1208 aa19.54■□□□□ 0.72
PPM1F-201ENST00000263212 PPP4R2Q9NY27 417 aa19.53■□□□□ 0.72
PPM1F-201ENST00000263212 GLIPR1L2Q4G1C9 344 aa19.53■□□□□ 0.72
PPM1F-201ENST00000263212 BAZ1BQ9UIG0 1483 aaKnown RBP19.53■□□□□ 0.72
PPM1F-201ENST00000263212 CCNB3Q8WWL7 1395 aa19.52■□□□□ 0.72
PPM1F-201ENST00000263212 SIN3AQ96ST3 1273 aa19.51■□□□□ 0.71
PPM1F-201ENST00000263212 CECR2Q9BXF3 1484 aa19.46■□□□□ 0.71
PPM1F-201ENST00000263212 STAG3Q9UJ98 1225 aa19.46■□□□□ 0.71
PPM1F-201ENST00000263212 BECN1Q14457 450 aa19.46■□□□□ 0.71
PPM1F-201ENST00000263212 SOGA1O94964 1423 aa19.45■□□□□ 0.7
PPM1F-201ENST00000263212 CCER2I3L3R5 266 aa19.45■□□□□ 0.7
PPM1F-201ENST00000263212 VPS8Q8N3P4 1428 aa19.43■□□□□ 0.7
PPM1F-201ENST00000263212 CHMP7Q8WUX9 453 aaPredicted RBP19.43■□□□□ 0.7
PPM1F-201ENST00000263212 PPM1GO15355 546 aaPredicted RBP19.42■□□□□ 0.7
PPM1F-201ENST00000263212 ESF1Q9H501 851 aaKnown RBP19.42■□□□□ 0.7
PPM1F-201ENST00000263212 FHAD1B1AJZ9 1412 aa19.42■□□□□ 0.7
PPM1F-201ENST00000263212 NPM1P06748 294 aaKnown RBP eCLIP19.4■□□□□ 0.7
PPM1F-201ENST00000263212 PLEKHD1A6NEE1 506 aa19.4■□□□□ 0.7
PPM1F-201ENST00000263212 CDCA8Q53HL2 280 aa19.39■□□□□ 0.69
PPM1F-201ENST00000263212 CARD11Q9BXL7 1154 aa19.38■□□□□ 0.69
PPM1F-201ENST00000263212 CFDP1Q9UEE9 299 aaPredicted RBP19.38■□□□□ 0.69
PPM1F-201ENST00000263212 ARXQ96QS3 562 aa19.37■□□□□ 0.69
PPM1F-201ENST00000263212 MYH16Q9H6N6 1097 aa19.35■□□□□ 0.69
PPM1F-201ENST00000263212 NOP58Q9Y2X3 529 aaKnown RBP19.34■□□□□ 0.69
PPM1F-201ENST00000263212 RGL3Q3MIN7 710 aa19.33■□□□□ 0.69
PPM1F-201ENST00000263212 KNSTRNQ9Y448 316 aa19.33■□□□□ 0.69
PPM1F-201ENST00000263212 SETD5Q9C0A6 1442 aa19.33■□□□□ 0.69
PPM1F-201ENST00000263212 B4GALNT3Q6L9W6 998 aa19.28■□□□□ 0.68
PPM1F-201ENST00000263212 ERICH6BQ5W0A0 696 aa19.28■□□□□ 0.68
PPM1F-201ENST00000263212 CFAP53Q96M91 514 aa19.28■□□□□ 0.68
PPM1F-201ENST00000263212 CARMIL1Q5VZK9 1371 aa19.27■□□□□ 0.68
PPM1F-201ENST00000263212 RBM19Q9Y4C8 960 aaKnown RBP19.27■□□□□ 0.67
PPM1F-201ENST00000263212 MROH2BQ7Z745 1585 aa19.26■□□□□ 0.67
PPM1F-201ENST00000263212 SENP3-EIF4A1A0A087X0R7 540 aa19.26■□□□□ 0.67
PPM1F-201ENST00000263212 GOLGA6L22H0YM25 854 aa19.24■□□□□ 0.67
PPM1F-201ENST00000263212 CCDC88BA6NC98 1476 aa19.24■□□□□ 0.67
PPM1F-201ENST00000263212 TRIM44Q96DX7 344 aaPredicted RBP19.24■□□□□ 0.67
PPM1F-201ENST00000263212 KANK4Q5T7N3 995 aaPredicted RBP19.22■□□□□ 0.67
PPM1F-201ENST00000263212 ABCC8Q09428 1581 aa19.2■□□□□ 0.66
PPM1F-201ENST00000263212 CUX2O14529 1486 aa19.2■□□□□ 0.66
PPM1F-201ENST00000263212 LAS1LQ9Y4W2 734 aaKnown RBP19.2■□□□□ 0.66
PPM1F-201ENST00000263212 HSPA5P11021 654 aaKnown RBP19.19■□□□□ 0.66
PPM1F-201ENST00000263212 ARHGAP35Q9NRY4 1499 aa19.18■□□□□ 0.66
PPM1F-201ENST00000263212 RAB3GAP2Q9H2M9 1393 aa19.17■□□□□ 0.66
PPM1F-201ENST00000263212 KCNH8Q96L42 1107 aa19.17■□□□□ 0.66
PPM1F-201ENST00000263212 FTSJ3Q8IY81 847 aaKnown RBP19.15■□□□□ 0.66
PPM1F-201ENST00000263212 RGS3P49796 1198 aa19.15■□□□□ 0.66
PPM1F-201ENST00000263212 NCLP19338 710 aaKnown RBP19.14■□□□□ 0.65
PPM1F-201ENST00000263212 TSHZ2Q9NRE2 1034 aa19.13■□□□□ 0.65
PPM1F-201ENST00000263212 PPP1R15AO75807 674 aaPredicted RBP19.12■□□□□ 0.65
PPM1F-201ENST00000263212 TMF1P82094 1093 aa19.11■□□□□ 0.65
PPM1F-201ENST00000263212 MS4A1P11836 297 aa19.1■□□□□ 0.65
PPM1F-201ENST00000263212 CC2D1BQ5T0F9 858 aaKnown RBP19.1■□□□□ 0.65
PPM1F-201ENST00000263212 NUDCQ9Y266 331 aa19.09■□□□□ 0.65
PPM1F-201ENST00000263212 DCAF11Q8TEB1 546 aa19.09■□□□□ 0.65
PPM1F-201ENST00000263212 DEKP35659 375 aaKnown RBP19.08■□□□□ 0.65
PPM1F-201ENST00000263212 NEUROD2Q15784 382 aa19.08■□□□□ 0.64
PPM1F-201ENST00000263212 MAPK8IP3Q9UPT6 1336 aa19.07■□□□□ 0.64
PPM1F-201ENST00000263212 FRAT1Q92837 279 aaPredicted RBP19.06■□□□□ 0.64
PPM1F-201ENST00000263212 CHMP4BQ9H444 224 aaKnown RBP19.06■□□□□ 0.64
PPM1F-201ENST00000263212 CASC1Q6TDU7 716 aa19.05■□□□□ 0.64
PPM1F-201ENST00000263212 TOP2AP11388 1531 aaKnown RBP19.03■□□□□ 0.64
PPM1F-201ENST00000263212 FMN1Q68DA7 1419 aa19.01■□□□□ 0.63
PPM1F-201ENST00000263212 RTN4Q9NQC3 1192 aaKnown RBP19■□□□□ 0.63
PPM1F-201ENST00000263212 KTN1Q86UP2 1357 aaKnown RBP18.99■□□□□ 0.63
PPM1F-201ENST00000263212 TCERG1O14776 1098 aaKnown RBP18.99■□□□□ 0.63
PPM1F-201ENST00000263212 MPHOSPH9Q99550 1183 aa18.99■□□□□ 0.63
PPM1F-201ENST00000263212 RALBP1Q15311 655 aa18.99■□□□□ 0.63
PPM1F-201ENST00000263212 DHX57Q6P158 1386 aaKnown RBP18.98■□□□□ 0.63
PPM1F-201ENST00000263212 PKD2Q13563 968 aa18.98■□□□□ 0.63
PPM1F-201ENST00000263212 PTMAP06454 111 aaKnown RBP18.98■□□□□ 0.63
PPM1F-201ENST00000263212 SMARCA2P51531 1590 aa18.98■□□□□ 0.63
PPM1F-201ENST00000263212 RCAN3Q9UKA8 241 aa18.97■□□□□ 0.63
PPM1F-201ENST00000263212 EIF4G1Q04637 1599 aaKnown RBP18.97■□□□□ 0.63
PPM1F-201ENST00000263212 WIZO95785 1651 aa18.96■□□□□ 0.63
PPM1F-201ENST00000263212 PLPPR3Q6T4P5 718 aa18.95■□□□□ 0.62
PPM1F-201ENST00000263212 PNNQ9H307 717 aaKnown RBP18.95■□□□□ 0.62
PPM1F-201ENST00000263212 NAP1L5Q96NT1 182 aaPredicted RBP18.94■□□□□ 0.62
PPM1F-201ENST00000263212 HSP90AB1P08238 724 aaKnown RBP18.94■□□□□ 0.62
PPM1F-201ENST00000263212 L1TD1Q5T7N2 865 aaKnown RBP18.94■□□□□ 0.62
PPM1F-201ENST00000263212 FOXD1Q16676 465 aa18.93■□□□□ 0.62
PPM1F-201ENST00000263212 TNNT2P45379 298 aaPredicted RBP18.92■□□□□ 0.62
PPM1F-201ENST00000263212 SENP3Q9H4L4 574 aaPredicted RBP18.91■□□□□ 0.62
PPM1F-201ENST00000263212 HSCBQ8IWL3 235 aa18.91■□□□□ 0.62
PPM1F-201ENST00000263212 RAPGEF2Q9Y4G8 1499 aa18.9■□□□□ 0.62
PPM1F-201ENST00000263212 U2SURPO15042 1029 aaKnown RBP18.89■□□□□ 0.62
PPM1F-201ENST00000263212 POGKQ9P215 609 aa18.89■□□□□ 0.62
PPM1F-201ENST00000263212 L3MBTL2Q969R5 705 aa18.89■□□□□ 0.61
PPM1F-201ENST00000263212 DNTTIP2Q5QJE6 756 aaKnown RBP18.88■□□□□ 0.61
PPM1F-201ENST00000263212 IPO9Q96P70 1041 aaKnown RBP18.88■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms