RNA–Protein interactions for RNA: ENST00000239231.6

PANK3-201, Transcript of pantothenate kinase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PANK3, Length 10,506 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PANK3-201ENST00000239231 RRP7BPQ9NSQ0 103 aa16.31■□□□□ 0.2
PANK3-201ENST00000239231 EIF5BO60841 1220 aaKnown RBP16.3■□□□□ 0.2
PANK3-201ENST00000239231 PPM1GO15355 546 aaPredicted RBP16.3■□□□□ 0.2
PANK3-201ENST00000239231 MRS2Q9HD23 443 aa16.29■□□□□ 0.2
PANK3-201ENST00000239231 ACIN1Q9UKV3 1341 aaKnown RBP16.28■□□□□ 0.2
PANK3-201ENST00000239231 RGL3Q3MIN7 710 aa16.28■□□□□ 0.2
PANK3-201ENST00000239231 LMOD2Q6P5Q4 547 aa16.27■□□□□ 0.2
PANK3-201ENST00000239231 TULP1O00294 542 aaPredicted RBP16.26■□□□□ 0.19
PANK3-201ENST00000239231 NBR1Q14596 966 aa16.25■□□□□ 0.19
PANK3-201ENST00000239231 NPHP1O15259 732 aa16.24■□□□□ 0.19
PANK3-201ENST00000239231 IRX6P78412 446 aaPredicted RBP16.23■□□□□ 0.19
PANK3-201ENST00000239231 SENP3-EIF4A1A0A087X0R7 540 aa16.21■□□□□ 0.19
PANK3-201ENST00000239231 PLEKHD1A6NEE1 506 aa16.21■□□□□ 0.19
PANK3-201ENST00000239231 ERCC6Q03468 1493 aa16.2■□□□□ 0.18
PANK3-201ENST00000239231 TRHP20396 242 aaPredicted RBP16.19■□□□□ 0.18
PANK3-201ENST00000239231 LAS1LQ9Y4W2 734 aaKnown RBP16.16■□□□□ 0.18
PANK3-201ENST00000239231 TAOK2Q9UL54 1235 aa16.15■□□□□ 0.18
PANK3-201ENST00000239231 TPRNQ4KMQ1 711 aa16.15■□□□□ 0.18
PANK3-201ENST00000239231 EIF4G2P78344 907 aaKnown RBP eCLIP16.14■□□□□ 0.17
PANK3-201ENST00000239231 RB1CC1Q8TDY2 1594 aa16.14■□□□□ 0.17
PANK3-201ENST00000239231 ZCCHC6Q5VYS8 1495 aaKnown RBP16.12■□□□□ 0.17
PANK3-201ENST00000239231 CLIP1P30622 1438 aa16.11■□□□□ 0.17
PANK3-201ENST00000239231 CCDC180Q9P1Z9 1646 aa16.11■□□□□ 0.17
PANK3-201ENST00000239231 CFAP53Q96M91 514 aa16.1■□□□□ 0.17
PANK3-201ENST00000239231 KNSTRNQ9Y448 316 aa16.09■□□□□ 0.17
PANK3-201ENST00000239231 POGKQ9P215 609 aa16.09■□□□□ 0.17
PANK3-201ENST00000239231 NEUROD2Q15784 382 aa16.09■□□□□ 0.17
PANK3-201ENST00000239231 CFDP1Q9UEE9 299 aaPredicted RBP16.09■□□□□ 0.17
PANK3-201ENST00000239231 TNNT2P45379 298 aaPredicted RBP16.08■□□□□ 0.17
PANK3-201ENST00000239231 RSF1Q96T23 1441 aaPredicted RBP16.08■□□□□ 0.16
PANK3-201ENST00000239231 FTSJ3Q8IY81 847 aaKnown RBP16.07■□□□□ 0.16
PANK3-201ENST00000239231 MLECQ14165 292 aa16.06■□□□□ 0.16
PANK3-201ENST00000239231 NCLP19338 710 aaKnown RBP16.06■□□□□ 0.16
PANK3-201ENST00000239231 SOX12O15370 315 aa16.03■□□□□ 0.16
PANK3-201ENST00000239231 ZRSR1Q15695 479 aaKnown RBP16.02■□□□□ 0.16
PANK3-201ENST00000239231 CASC1Q6TDU7 716 aa16.02■□□□□ 0.16
PANK3-201ENST00000239231 CARD11Q9BXL7 1154 aa16.01■□□□□ 0.15
PANK3-201ENST00000239231 MAPK8IP3Q9UPT6 1336 aa16.01■□□□□ 0.15
PANK3-201ENST00000239231 CDCA8Q53HL2 280 aa16■□□□□ 0.15
PANK3-201ENST00000239231 BAZ1BQ9UIG0 1483 aaKnown RBP16■□□□□ 0.15
PANK3-201ENST00000239231 BECN1Q14457 450 aa15.99■□□□□ 0.15
PANK3-201ENST00000239231 GOLGA2Q08379 1002 aa15.99■□□□□ 0.15
PANK3-201ENST00000239231 EIF4G1Q04637 1599 aaKnown RBP15.98■□□□□ 0.15
PANK3-201ENST00000239231 OS9Q13438 667 aaPredicted RBP15.97■□□□□ 0.15
PANK3-201ENST00000239231 MIER1Q8N108 512 aa15.96■□□□□ 0.15
PANK3-201ENST00000239231 DCAF1Q9Y4B6 1507 aa15.96■□□□□ 0.15
PANK3-201ENST00000239231 U2SURPO15042 1029 aaKnown RBP15.95■□□□□ 0.14
PANK3-201ENST00000239231 CC2D1BQ5T0F9 858 aaKnown RBP15.94■□□□□ 0.14
PANK3-201ENST00000239231 GOLGA6L22H0YM25 854 aa15.94■□□□□ 0.14
PANK3-201ENST00000239231 NAP1L2Q9ULW6 460 aaPredicted RBP15.94■□□□□ 0.14
PANK3-201ENST00000239231 GOLGA3Q08378 1498 aa15.93■□□□□ 0.14
PANK3-201ENST00000239231 NUDCQ9Y266 331 aa15.93■□□□□ 0.14
PANK3-201ENST00000239231 FRAT1Q92837 279 aaPredicted RBP15.93■□□□□ 0.14
PANK3-201ENST00000239231 NCBP3Q53F19 620 aaKnown RBP15.93■□□□□ 0.14
PANK3-201ENST00000239231 TRIM44Q96DX7 344 aaPredicted RBP15.93■□□□□ 0.14
PANK3-201ENST00000239231 SAFB2Q14151 953 aaKnown RBP eCLIP15.92■□□□□ 0.14
PANK3-201ENST00000239231 FGD1P98174 961 aa15.91■□□□□ 0.14
PANK3-201ENST00000239231 GLIPR1L2Q4G1C9 344 aa15.89■□□□□ 0.13
PANK3-201ENST00000239231 DDRGK1Q96HY6 314 aa15.88■□□□□ 0.13
PANK3-201ENST00000239231 KIF27Q86VH2 1401 aa15.88■□□□□ 0.13
PANK3-201ENST00000239231 CEP162Q5TB80 1403 aa15.88■□□□□ 0.13
PANK3-201ENST00000239231 PTMAP06454 111 aaKnown RBP15.88■□□□□ 0.13
PANK3-201ENST00000239231 KCNJ4P48050 445 aa15.88■□□□□ 0.13
PANK3-201ENST00000239231 SRPK2P78362 688 aaKnown RBP15.88■□□□□ 0.13
PANK3-201ENST00000239231 ISY1Q9ULR0 285 aaKnown RBP15.85■□□□□ 0.13
PANK3-201ENST00000239231 KANK1Q14678 1352 aa15.85■□□□□ 0.13
PANK3-201ENST00000239231 CLSTN1O94985 981 aa15.85■□□□□ 0.13
PANK3-201ENST00000239231 WRNQ14191 1432 aaPredicted RBP eCLIP15.84■□□□□ 0.13
PANK3-201ENST00000239231 PAK3O75914 559 aaPredicted RBP15.84■□□□□ 0.13
PANK3-201ENST00000239231 PLCB2Q00722 1185 aa15.83■□□□□ 0.12
PANK3-201ENST00000239231 DNTTIP2Q5QJE6 756 aaKnown RBP15.83■□□□□ 0.12
PANK3-201ENST00000239231 RGS3P49796 1198 aa15.83■□□□□ 0.12
PANK3-201ENST00000239231 STK26Q9P289 416 aa15.83■□□□□ 0.12
PANK3-201ENST00000239231 DCAF11Q8TEB1 546 aa15.82■□□□□ 0.12
PANK3-201ENST00000239231 HDGFP51858 240 aaKnown RBP15.82■□□□□ 0.12
PANK3-201ENST00000239231 SUPT16HQ9Y5B9 1047 aaKnown RBP15.81■□□□□ 0.12
PANK3-201ENST00000239231 CCNB3Q8WWL7 1395 aa15.81■□□□□ 0.12
PANK3-201ENST00000239231 GGT6Q6P531 493 aa15.8■□□□□ 0.12
PANK3-201ENST00000239231 ZNF330Q9Y3S2 320 aaPredicted RBP15.8■□□□□ 0.12
PANK3-201ENST00000239231 PNNQ9H307 717 aaKnown RBP15.79■□□□□ 0.12
PANK3-201ENST00000239231 SIN3AQ96ST3 1273 aa15.77■□□□□ 0.12
PANK3-201ENST00000239231 NACADO15069 1562 aa15.76■□□□□ 0.11
PANK3-201ENST00000239231 RTF1Q92541 710 aaKnown RBP15.75■□□□□ 0.11
PANK3-201ENST00000239231 CCDC9Q9Y3X0 531 aaKnown RBP15.75■□□□□ 0.11
PANK3-201ENST00000239231 HSP90AB1P08238 724 aaKnown RBP15.75■□□□□ 0.11
PANK3-201ENST00000239231 TMF1P82094 1093 aa15.75■□□□□ 0.11
PANK3-201ENST00000239231 ANP32EQ9BTT0 268 aa15.75■□□□□ 0.11
PANK3-201ENST00000239231 CSB-PGBD3P0DP91 1061 aa15.74■□□□□ 0.11
PANK3-201ENST00000239231 EEA1Q15075 1411 aa15.74■□□□□ 0.11
PANK3-201ENST00000239231 CEP164Q9UPV0 1460 aa15.73■□□□□ 0.11
PANK3-201ENST00000239231 CHMP4BQ9H444 224 aaKnown RBP15.72■□□□□ 0.11
PANK3-201ENST00000239231 MORC1Q86VD1 984 aa15.71■□□□□ 0.11
PANK3-201ENST00000239231 APBB1O00213 710 aa15.69■□□□□ 0.1
PANK3-201ENST00000239231 MS4A1P11836 297 aa15.67■□□□□ 0.1
PANK3-201ENST00000239231 GOLGA6L6A8MZA4 724 aa15.67■□□□□ 0.1
PANK3-201ENST00000239231 GOLGA6L4A6NEF3 574 aa15.67■□□□□ 0.1
PANK3-201ENST00000239231 TMX4Q9H1E5 349 aaPredicted RBP15.66■□□□□ 0.1
PANK3-201ENST00000239231 GNL2Q13823 731 aaKnown RBP15.66■□□□□ 0.1
PANK3-201ENST00000239231 CUX2O14529 1486 aa15.66■□□□□ 0.1
PANK3-201ENST00000239231 MYO15BQ96JP2 1530 aa15.66■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms