RNA–Protein interactions for RNA: ENST00000231061.8

SPARC-201, Transcript of secreted protein acidic and cysteine rich, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPARC, Length 3,701 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPARC-201ENST00000231061 EIF4G1Q04637 1599 aaKnown RBP12.03□□□□□ -0.48
SPARC-201ENST00000231061 CLSPNQ9HAW4 1339 aa12.02□□□□□ -0.48
SPARC-201ENST00000231061 TMEM132AQ24JP5 1023 aa12.02□□□□□ -0.49
SPARC-201ENST00000231061 MYT1LQ9UL68 1186 aa12.01□□□□□ -0.49
SPARC-201ENST00000231061 ZMYND15Q9H091 742 aa12.01□□□□□ -0.49
SPARC-201ENST00000231061 FBXO3Q9UK99 471 aa11.99□□□□□ -0.49
SPARC-201ENST00000231061 SMARCA2P51531 1590 aa11.99□□□□□ -0.49
SPARC-201ENST00000231061 SOGA1O94964 1423 aa11.98□□□□□ -0.49
SPARC-201ENST00000231061 IGSF3O75054 1194 aa11.98□□□□□ -0.49
SPARC-201ENST00000231061 CNKSR2Q8WXI2 1034 aa11.98□□□□□ -0.49
SPARC-201ENST00000231061 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.98□□□□□ -0.49
SPARC-201ENST00000231061 CEP162Q5TB80 1403 aa11.97□□□□□ -0.49
SPARC-201ENST00000231061 VSIG10Q8N0Z9 540 aa11.94□□□□□ -0.5
SPARC-201ENST00000231061 UNC13AQ9UPW8 1703 aa11.91□□□□□ -0.5
SPARC-201ENST00000231061 TNIKQ9UKE5 1360 aa11.91□□□□□ -0.5
SPARC-201ENST00000231061 RUSC2Q8N2Y8 1516 aa11.9□□□□□ -0.5
SPARC-201ENST00000231061 PLCB2Q00722 1185 aa11.9□□□□□ -0.5
SPARC-201ENST00000231061 RSPH6AQ9H0K4 717 aa11.9□□□□□ -0.5
SPARC-201ENST00000231061 GLIPR1L2Q4G1C9 344 aa11.89□□□□□ -0.51
SPARC-201ENST00000231061 WRNQ14191 1432 aaPredicted RBP eCLIP11.89□□□□□ -0.51
SPARC-201ENST00000231061 ERICH6BQ5W0A0 696 aa11.88□□□□□ -0.51
SPARC-201ENST00000231061 EEA1Q15075 1411 aa11.88□□□□□ -0.51
SPARC-201ENST00000231061 RSPH4AQ5TD94 716 aa11.86□□□□□ -0.51
SPARC-201ENST00000231061 GOLGA3Q08378 1498 aa11.85□□□□□ -0.51
SPARC-201ENST00000231061 DIEXFQ68CQ4 756 aaKnown RBP11.83□□□□□ -0.52
SPARC-201ENST00000231061 BICRAQ9NZM4 1560 aa11.8□□□□□ -0.52
SPARC-201ENST00000231061 HSP90B1P14625 803 aaKnown RBP11.8□□□□□ -0.52
SPARC-201ENST00000231061 HNRNPUL2Q1KMD3 747 aaKnown RBP11.8□□□□□ -0.52
SPARC-201ENST00000231061 PRDM10Q9NQV6 1147 aa11.8□□□□□ -0.52
SPARC-201ENST00000231061 ZNF326Q5BKZ1 582 aaKnown RBP11.8□□□□□ -0.52
SPARC-201ENST00000231061 BRPF3Q9ULD4 1205 aa11.79□□□□□ -0.52
SPARC-201ENST00000231061 NAP1L2Q9ULW6 460 aaPredicted RBP11.78□□□□□ -0.52
SPARC-201ENST00000231061 CHMP4BQ9H444 224 aaKnown RBP11.78□□□□□ -0.52
SPARC-201ENST00000231061 CEP164Q9UPV0 1460 aa11.77□□□□□ -0.53
SPARC-201ENST00000231061 BAZ1BQ9UIG0 1483 aaKnown RBP11.76□□□□□ -0.53
SPARC-201ENST00000231061 CLIP1P30622 1438 aa11.75□□□□□ -0.53
SPARC-201ENST00000231061 SYNJ1O43426 1573 aa11.75□□□□□ -0.53
SPARC-201ENST00000231061 ATAD2BQ9ULI0 1458 aa11.74□□□□□ -0.53
SPARC-201ENST00000231061 ZFP91Q96JP5 570 aaPredicted RBP11.72□□□□□ -0.53
SPARC-201ENST00000231061 PEG3Q9GZU2 1588 aa11.71□□□□□ -0.53
SPARC-201ENST00000231061 CCDC9Q9Y3X0 531 aaKnown RBP11.71□□□□□ -0.53
SPARC-201ENST00000231061 ZNF316A6NFI3 1004 aaPredicted RBP11.7□□□□□ -0.54
SPARC-201ENST00000231061 CNPY4Q8N129 248 aa11.7□□□□□ -0.54
SPARC-201ENST00000231061 BCCIPQ9P287 314 aaKnown RBP eCLIP11.69□□□□□ -0.54
SPARC-201ENST00000231061 RAPGEF2Q9Y4G8 1499 aa11.68□□□□□ -0.54
SPARC-201ENST00000231061 KIF21BO75037 1637 aa11.67□□□□□ -0.54
SPARC-201ENST00000231061 TSHZ2Q9NRE2 1034 aa11.67□□□□□ -0.54
SPARC-201ENST00000231061 YTHDC1Q96MU7 727 aaKnown RBP11.67□□□□□ -0.54
SPARC-201ENST00000231061 VPS8Q8N3P4 1428 aa11.67□□□□□ -0.54
SPARC-201ENST00000231061 IL27Q8NEV9 243 aa11.64□□□□□ -0.55
SPARC-201ENST00000231061 TMED8Q6PL24 325 aaPredicted RBP11.63□□□□□ -0.55
SPARC-201ENST00000231061 ZNF592Q92610 1267 aa11.62□□□□□ -0.55
SPARC-201ENST00000231061 BBXQ8WY36 941 aaPredicted RBP11.62□□□□□ -0.55
SPARC-201ENST00000231061 SECISBP2LQ93073 1101 aaKnown RBP11.6□□□□□ -0.55
SPARC-201ENST00000231061 FBLN2P98095 1184 aa11.6□□□□□ -0.55
SPARC-201ENST00000231061 ZNF526Q8TF50 670 aaPredicted RBP11.59□□□□□ -0.55
SPARC-201ENST00000231061 ARID3AQ99856 593 aa11.58□□□□□ -0.56
SPARC-201ENST00000231061 WWC1Q8IX03 1113 aa11.57□□□□□ -0.56
SPARC-201ENST00000231061 KDM2AQ9Y2K7 1162 aa11.57□□□□□ -0.56
SPARC-201ENST00000231061 TOP2BQ02880 1626 aa11.56□□□□□ -0.56
SPARC-201ENST00000231061 NCLP19338 710 aaKnown RBP11.56□□□□□ -0.56
SPARC-201ENST00000231061 MIER1Q8N108 512 aa11.55□□□□□ -0.56
SPARC-201ENST00000231061 GTF3C5Q9Y5Q8 519 aaPredicted RBP11.55□□□□□ -0.56
SPARC-201ENST00000231061 KANK4Q5T7N3 995 aaPredicted RBP11.51□□□□□ -0.57
SPARC-201ENST00000231061 ITGAEP38570 1179 aa11.51□□□□□ -0.57
SPARC-201ENST00000231061 KIF27Q86VH2 1401 aa11.5□□□□□ -0.57
SPARC-201ENST00000231061 PRXQ9BXM0 1461 aa11.49□□□□□ -0.57
SPARC-201ENST00000231061 KCNG1Q9UIX4 513 aa11.49□□□□□ -0.57
SPARC-201ENST00000231061 ARAP1Q96P48 1450 aa11.49□□□□□ -0.57
SPARC-201ENST00000231061 BIVM-ERCC5R4GMW8 1640 aa11.49□□□□□ -0.57
SPARC-201ENST00000231061 ERICH3Q5RHP9 1530 aa11.48□□□□□ -0.57
SPARC-201ENST00000231061 ZNF428Q96B54 188 aa11.48□□□□□ -0.57
SPARC-201ENST00000231061 CUX1P39880 1505 aa11.48□□□□□ -0.57
SPARC-201ENST00000231061 IPO4Q8TEX9 1081 aaKnown RBP11.47□□□□□ -0.57
SPARC-201ENST00000231061 FOXD1Q16676 465 aa11.46□□□□□ -0.57
SPARC-201ENST00000231061 NCAPD3P42695 1498 aa11.46□□□□□ -0.58
SPARC-201ENST00000231061 PLCD3Q8N3E9 789 aa11.45□□□□□ -0.58
SPARC-201ENST00000231061 TICAM2Q86XR7 235 aa11.45□□□□□ -0.58
SPARC-201ENST00000231061 DHX57Q6P158 1386 aaKnown RBP11.44□□□□□ -0.58
SPARC-201ENST00000231061 HMGXB3Q12766 1538 aa11.44□□□□□ -0.58
SPARC-201ENST00000231061 CWC22Q9HCG8 908 aaKnown RBP11.43□□□□□ -0.58
SPARC-201ENST00000231061 TEX2Q8IWB9 1127 aa11.42□□□□□ -0.58
SPARC-201ENST00000231061 FAM43BQ6ZT52 329 aaPredicted RBP11.42□□□□□ -0.58
SPARC-201ENST00000231061 ATP1B4Q9UN42 357 aaPredicted RBP11.4□□□□□ -0.58
SPARC-201ENST00000231061 CFTRP13569 1480 aa11.4□□□□□ -0.58
SPARC-201ENST00000231061 PATL2C9JE40 543 aaKnown RBP11.4□□□□□ -0.58
SPARC-201ENST00000231061 CANXP27824 592 aaKnown RBP11.4□□□□□ -0.58
SPARC-201ENST00000231061 GTF2E1P29083 439 aaPredicted RBP11.4□□□□□ -0.58
SPARC-201ENST00000231061 FTSJ3Q8IY81 847 aaKnown RBP11.4□□□□□ -0.58
SPARC-201ENST00000231061 CUX2O14529 1486 aa11.4□□□□□ -0.58
SPARC-201ENST00000231061 CCNB3Q8WWL7 1395 aa11.39□□□□□ -0.59
SPARC-201ENST00000231061 ARHGAP35Q9NRY4 1499 aa11.38□□□□□ -0.59
SPARC-201ENST00000231061 HMGB1P09429 215 aaKnown RBP11.38□□□□□ -0.59
SPARC-201ENST00000231061 USP35Q9P2H5 1018 aa11.37□□□□□ -0.59
SPARC-201ENST00000231061 RRBP1Q9P2E9 1410 aaKnown RBP11.37□□□□□ -0.59
SPARC-201ENST00000231061 P3H3Q8IVL6 736 aa11.36□□□□□ -0.59
SPARC-201ENST00000231061 CERS3Q8IU89 383 aa11.35□□□□□ -0.59
SPARC-201ENST00000231061 PSMD1Q99460 953 aa11.35□□□□□ -0.59
SPARC-201ENST00000231061 FAM50AQ14320 339 aaKnown RBP11.34□□□□□ -0.59
SPARC-201ENST00000231061 RTL5Q5HYW3 569 aaPredicted RBP11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 8.9 ms