RNA–Protein interactions for RNA: ENST00000220959.8

UBR5-201, Transcript of ubiquitin protein ligase E3 component n-recognin 5, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene UBR5, Length 9,418 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR5-201ENST00000220959 BECN1Q14457 450 aa19.62■□□□□ 0.73
UBR5-201ENST00000220959 MRS2Q9HD23 443 aa19.6■□□□□ 0.73
UBR5-201ENST00000220959 GOLGA6L22H0YM25 854 aa19.6■□□□□ 0.73
UBR5-201ENST00000220959 PPP1R15AO75807 674 aaPredicted RBP19.6■□□□□ 0.73
UBR5-201ENST00000220959 SENP3Q9H4L4 574 aaPredicted RBP19.57■□□□□ 0.72
UBR5-201ENST00000220959 ANP32EQ9BTT0 268 aa19.55■□□□□ 0.72
UBR5-201ENST00000220959 DDRGK1Q96HY6 314 aa19.55■□□□□ 0.72
UBR5-201ENST00000220959 CASC1Q6TDU7 716 aa19.53■□□□□ 0.72
UBR5-201ENST00000220959 TNNT2P45379 298 aaPredicted RBP19.51■□□□□ 0.71
UBR5-201ENST00000220959 PTMAP06454 111 aaKnown RBP19.51■□□□□ 0.71
UBR5-201ENST00000220959 NPHP1O15259 732 aa19.5■□□□□ 0.71
UBR5-201ENST00000220959 DNTTIP2Q5QJE6 756 aaKnown RBP19.48■□□□□ 0.71
UBR5-201ENST00000220959 IRX6P78412 446 aaPredicted RBP19.47■□□□□ 0.71
UBR5-201ENST00000220959 TPRNQ4KMQ1 711 aa19.46■□□□□ 0.71
UBR5-201ENST00000220959 CFAP53Q96M91 514 aa19.45■□□□□ 0.7
UBR5-201ENST00000220959 PPM1GO15355 546 aaPredicted RBP19.42■□□□□ 0.7
UBR5-201ENST00000220959 CHMP7Q8WUX9 453 aaPredicted RBP19.42■□□□□ 0.7
UBR5-201ENST00000220959 ARID4BQ4LE39 1312 aaPredicted RBP19.42■□□□□ 0.7
UBR5-201ENST00000220959 MTUS2Q5JR59 1369 aa19.41■□□□□ 0.7
UBR5-201ENST00000220959 EIF4G2P78344 907 aaKnown RBP eCLIP19.41■□□□□ 0.7
UBR5-201ENST00000220959 FTSJ3Q8IY81 847 aaKnown RBP19.39■□□□□ 0.7
UBR5-201ENST00000220959 TAOK2Q9UL54 1235 aa19.39■□□□□ 0.7
UBR5-201ENST00000220959 LAS1LQ9Y4W2 734 aaKnown RBP19.37■□□□□ 0.69
UBR5-201ENST00000220959 KCNH8Q96L42 1107 aa19.36■□□□□ 0.69
UBR5-201ENST00000220959 LMOD2Q6P5Q4 547 aa19.34■□□□□ 0.69
UBR5-201ENST00000220959 HIRIP3Q9BW71 556 aaPredicted RBP19.34■□□□□ 0.69
UBR5-201ENST00000220959 GOLGA2Q08379 1002 aa19.33■□□□□ 0.68
UBR5-201ENST00000220959 NCBP3Q53F19 620 aaKnown RBP19.33■□□□□ 0.68
UBR5-201ENST00000220959 CDCA8Q53HL2 280 aa19.32■□□□□ 0.68
UBR5-201ENST00000220959 PLCB2Q00722 1185 aa19.32■□□□□ 0.68
UBR5-201ENST00000220959 RGL3Q3MIN7 710 aa19.32■□□□□ 0.68
UBR5-201ENST00000220959 GOLGA6L6A8MZA4 724 aa19.32■□□□□ 0.68
UBR5-201ENST00000220959 FGD1P98174 961 aa19.32■□□□□ 0.68
UBR5-201ENST00000220959 KNSTRNQ9Y448 316 aa19.3■□□□□ 0.68
UBR5-201ENST00000220959 OS9Q13438 667 aaPredicted RBP19.29■□□□□ 0.68
UBR5-201ENST00000220959 MAPK8IP3Q9UPT6 1336 aa19.29■□□□□ 0.68
UBR5-201ENST00000220959 NAP1L2Q9ULW6 460 aaPredicted RBP19.28■□□□□ 0.68
UBR5-201ENST00000220959 RRP7BPQ9NSQ0 103 aa19.28■□□□□ 0.68
UBR5-201ENST00000220959 KCNJ4P48050 445 aa19.26■□□□□ 0.67
UBR5-201ENST00000220959 NUDCQ9Y266 331 aa19.25■□□□□ 0.67
UBR5-201ENST00000220959 NRDCO43847 1150 aa19.25■□□□□ 0.67
UBR5-201ENST00000220959 CLSTN1O94985 981 aa19.23■□□□□ 0.67
UBR5-201ENST00000220959 NEUROD2Q15784 382 aa19.22■□□□□ 0.67
UBR5-201ENST00000220959 PLEKHD1A6NEE1 506 aa19.22■□□□□ 0.67
UBR5-201ENST00000220959 CHMP4BQ9H444 224 aaKnown RBP19.21■□□□□ 0.67
UBR5-201ENST00000220959 HSP90AB1P08238 724 aaKnown RBP19.21■□□□□ 0.67
UBR5-201ENST00000220959 POGKQ9P215 609 aa19.21■□□□□ 0.67
UBR5-201ENST00000220959 ERICH6BQ5W0A0 696 aa19.18■□□□□ 0.66
UBR5-201ENST00000220959 NAP1L5Q96NT1 182 aaPredicted RBP19.17■□□□□ 0.66
UBR5-201ENST00000220959 PNNQ9H307 717 aaKnown RBP19.17■□□□□ 0.66
UBR5-201ENST00000220959 SCRIBQ14160 1630 aa19.17■□□□□ 0.66
UBR5-201ENST00000220959 SENP3-EIF4A1A0A087X0R7 540 aa19.15■□□□□ 0.66
UBR5-201ENST00000220959 GOLGA6L4A6NEF3 574 aa19.15■□□□□ 0.66
UBR5-201ENST00000220959 MIER1Q8N108 512 aa19.15■□□□□ 0.66
UBR5-201ENST00000220959 FRAT1Q92837 279 aaPredicted RBP19.14■□□□□ 0.65
UBR5-201ENST00000220959 ISY1Q9ULR0 285 aaKnown RBP19.14■□□□□ 0.65
UBR5-201ENST00000220959 MS4A1P11836 297 aa19.13■□□□□ 0.65
UBR5-201ENST00000220959 RSF1Q96T23 1441 aaPredicted RBP19.12■□□□□ 0.65
UBR5-201ENST00000220959 CARD11Q9BXL7 1154 aa19.12■□□□□ 0.65
UBR5-201ENST00000220959 U2SURPO15042 1029 aaKnown RBP19.1■□□□□ 0.65
UBR5-201ENST00000220959 L1TD1Q5T7N2 865 aaKnown RBP19.1■□□□□ 0.65
UBR5-201ENST00000220959 RGS3P49796 1198 aa19.09■□□□□ 0.65
UBR5-201ENST00000220959 CHAF1AQ13111 956 aaPredicted RBP19.08■□□□□ 0.65
UBR5-201ENST00000220959 SUPT16HQ9Y5B9 1047 aaKnown RBP19.08■□□□□ 0.64
UBR5-201ENST00000220959 MCCP23508 829 aa19.05■□□□□ 0.64
UBR5-201ENST00000220959 DRC7Q8IY82 874 aa19.04■□□□□ 0.64
UBR5-201ENST00000220959 CFDP1Q9UEE9 299 aaPredicted RBP19.04■□□□□ 0.64
UBR5-201ENST00000220959 GNL2Q13823 731 aaKnown RBP19.02■□□□□ 0.64
UBR5-201ENST00000220959 KIAA2012Q0VF49 1180 aa19.02■□□□□ 0.63
UBR5-201ENST00000220959 HSCBQ8IWL3 235 aa19.01■□□□□ 0.63
UBR5-201ENST00000220959 DCAF1Q9Y4B6 1507 aa19■□□□□ 0.63
UBR5-201ENST00000220959 CC2D1BQ5T0F9 858 aaKnown RBP18.99■□□□□ 0.63
UBR5-201ENST00000220959 HDGFP51858 240 aaKnown RBP18.99■□□□□ 0.63
UBR5-201ENST00000220959 SOX12O15370 315 aa18.98■□□□□ 0.63
UBR5-201ENST00000220959 MSNP26038 577 aaKnown RBP18.97■□□□□ 0.63
UBR5-201ENST00000220959 PRM3Q9NNZ6 103 aa18.96■□□□□ 0.63
UBR5-201ENST00000220959 CFAP44Q96MT7 982 aa18.96■□□□□ 0.63
UBR5-201ENST00000220959 RTF1Q92541 710 aaKnown RBP18.96■□□□□ 0.63
UBR5-201ENST00000220959 CLIP1P30622 1438 aa18.96■□□□□ 0.63
UBR5-201ENST00000220959 TMX4Q9H1E5 349 aaPredicted RBP18.94■□□□□ 0.62
UBR5-201ENST00000220959 ZCCHC6Q5VYS8 1495 aaKnown RBP18.94■□□□□ 0.62
UBR5-201ENST00000220959 RTN4Q9NQC3 1192 aaKnown RBP18.93■□□□□ 0.62
UBR5-201ENST00000220959 TRHP20396 242 aaPredicted RBP18.93■□□□□ 0.62
UBR5-201ENST00000220959 PPP4R2Q9NY27 417 aa18.93■□□□□ 0.62
UBR5-201ENST00000220959 NOC3LQ8WTT2 800 aaKnown RBP18.92■□□□□ 0.62
UBR5-201ENST00000220959 SRPK2P78362 688 aaKnown RBP18.91■□□□□ 0.62
UBR5-201ENST00000220959 KIAA1211Q6ZU35 1233 aa18.9■□□□□ 0.62
UBR5-201ENST00000220959 NOP58Q9Y2X3 529 aaKnown RBP18.9■□□□□ 0.62
UBR5-201ENST00000220959 TMF1P82094 1093 aa18.89■□□□□ 0.62
UBR5-201ENST00000220959 MLECQ14165 292 aa18.86■□□□□ 0.61
UBR5-201ENST00000220959 KANK1Q14678 1352 aa18.85■□□□□ 0.61
UBR5-201ENST00000220959 SPRYD3Q8NCJ5 442 aa18.85■□□□□ 0.61
UBR5-201ENST00000220959 MORC1Q86VD1 984 aa18.83■□□□□ 0.6
UBR5-201ENST00000220959 ZNF330Q9Y3S2 320 aaPredicted RBP18.83■□□□□ 0.6
UBR5-201ENST00000220959 AMER1Q5JTC6 1135 aaPredicted RBP18.82■□□□□ 0.6
UBR5-201ENST00000220959 HTATSF1O43719 755 aaKnown RBP18.81■□□□□ 0.6
UBR5-201ENST00000220959 PAK3O75914 559 aaPredicted RBP18.81■□□□□ 0.6
UBR5-201ENST00000220959 APBB1O00213 710 aa18.8■□□□□ 0.6
UBR5-201ENST00000220959 CSB-PGBD3P0DP91 1061 aa18.79■□□□□ 0.6
UBR5-201ENST00000220959 G3V3G9 751 aa18.79■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms