RNA–Protein interactions for RNA: ENST00000219476.7

TSC2-201, Transcript of TSC complex subunit 2, humanhuman

APPRIS P3 TSL 5 BASIC

Gene TSC2, Length 6,156 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSC2-201ENST00000219476 TPRNQ4KMQ1 711 aa21.87■■□□□ 1.09
TSC2-201ENST00000219476 CASC1Q6TDU7 716 aa21.87■■□□□ 1.09
TSC2-201ENST00000219476 NBR1Q14596 966 aa21.87■■□□□ 1.09
TSC2-201ENST00000219476 ARID4BQ4LE39 1312 aaPredicted RBP21.87■■□□□ 1.09
TSC2-201ENST00000219476 GOLGA2Q08379 1002 aa21.84■■□□□ 1.09
TSC2-201ENST00000219476 PRM3Q9NNZ6 103 aa21.82■■□□□ 1.08
TSC2-201ENST00000219476 BECN1Q14457 450 aa21.81■■□□□ 1.08
TSC2-201ENST00000219476 KDM2AQ9Y2K7 1162 aa21.8■■□□□ 1.08
TSC2-201ENST00000219476 DNTTIP2Q5QJE6 756 aaKnown RBP21.79■■□□□ 1.08
TSC2-201ENST00000219476 LMOD2Q6P5Q4 547 aa21.79■■□□□ 1.08
TSC2-201ENST00000219476 GOLGA6L6A8MZA4 724 aa21.78■■□□□ 1.08
TSC2-201ENST00000219476 ISY1Q9ULR0 285 aaKnown RBP21.75■■□□□ 1.07
TSC2-201ENST00000219476 ANP32EQ9BTT0 268 aa21.73■■□□□ 1.07
TSC2-201ENST00000219476 TSPY4P0CV99 314 aa21.72■■□□□ 1.07
TSC2-201ENST00000219476 TSPY10P0CW01 314 aa21.72■■□□□ 1.07
TSC2-201ENST00000219476 FGD1P98174 961 aa21.7■■□□□ 1.06
TSC2-201ENST00000219476 NAP1L2Q9ULW6 460 aaPredicted RBP21.69■■□□□ 1.06
TSC2-201ENST00000219476 ABCC9O60706 1549 aa21.68■■□□□ 1.06
TSC2-201ENST00000219476 PPM1GO15355 546 aaPredicted RBP21.67■■□□□ 1.06
TSC2-201ENST00000219476 CHIC2Q9UKJ5 165 aa21.67■■□□□ 1.06
TSC2-201ENST00000219476 CFAP53Q96M91 514 aa21.66■■□□□ 1.06
TSC2-201ENST00000219476 OS9Q13438 667 aaPredicted RBP21.66■■□□□ 1.06
TSC2-201ENST00000219476 DDRGK1Q96HY6 314 aa21.66■■□□□ 1.06
TSC2-201ENST00000219476 PLCB2Q00722 1185 aa21.63■■□□□ 1.05
TSC2-201ENST00000219476 NRDCO43847 1150 aa21.63■■□□□ 1.05
TSC2-201ENST00000219476 EIF4G2P78344 907 aaKnown RBP eCLIP21.61■■□□□ 1.05
TSC2-201ENST00000219476 MRS2Q9HD23 443 aa21.61■■□□□ 1.05
TSC2-201ENST00000219476 DDX10Q13206 875 aaKnown RBP21.6■■□□□ 1.05
TSC2-201ENST00000219476 LAS1LQ9Y4W2 734 aaKnown RBP21.59■■□□□ 1.05
TSC2-201ENST00000219476 KRI1Q8N9T8 703 aaKnown RBP21.59■■□□□ 1.05
TSC2-201ENST00000219476 FTSJ3Q8IY81 847 aaKnown RBP21.58■■□□□ 1.04
TSC2-201ENST00000219476 KCNJ4P48050 445 aa21.57■■□□□ 1.04
TSC2-201ENST00000219476 ACIN1Q9UKV3 1341 aaKnown RBP21.57■■□□□ 1.04
TSC2-201ENST00000219476 L1TD1Q5T7N2 865 aaKnown RBP21.56■■□□□ 1.04
TSC2-201ENST00000219476 TMX4Q9H1E5 349 aaPredicted RBP21.53■■□□□ 1.04
TSC2-201ENST00000219476 PNNQ9H307 717 aaKnown RBP21.51■■□□□ 1.03
TSC2-201ENST00000219476 MAPK8IP3Q9UPT6 1336 aa21.51■■□□□ 1.03
TSC2-201ENST00000219476 KIAA2012Q0VF49 1180 aa21.51■■□□□ 1.03
TSC2-201ENST00000219476 KCNH8Q96L42 1107 aa21.49■■□□□ 1.03
TSC2-201ENST00000219476 CHMP7Q8WUX9 453 aaPredicted RBP21.48■■□□□ 1.03
TSC2-201ENST00000219476 GOLGA6L4A6NEF3 574 aa21.46■■□□□ 1.03
TSC2-201ENST00000219476 NOC3LQ8WTT2 800 aaKnown RBP21.45■■□□□ 1.02
TSC2-201ENST00000219476 CHAF1AQ13111 956 aaPredicted RBP21.44■■□□□ 1.02
TSC2-201ENST00000219476 CSRNP3Q8WYN3 585 aa21.43■■□□□ 1.02
TSC2-201ENST00000219476 POGKQ9P215 609 aa21.42■■□□□ 1.02
TSC2-201ENST00000219476 GNL2Q13823 731 aaKnown RBP21.42■■□□□ 1.02
TSC2-201ENST00000219476 NUDCQ9Y266 331 aa21.41■■□□□ 1.02
TSC2-201ENST00000219476 IRX6P78412 446 aaPredicted RBP21.4■■□□□ 1.02
TSC2-201ENST00000219476 CDCA8Q53HL2 280 aa21.39■■□□□ 1.02
TSC2-201ENST00000219476 CHMP4BQ9H444 224 aaKnown RBP21.39■■□□□ 1.01
TSC2-201ENST00000219476 TRHP20396 242 aaPredicted RBP21.37■■□□□ 1.01
TSC2-201ENST00000219476 HSP90AB1P08238 724 aaKnown RBP21.37■■□□□ 1.01
TSC2-201ENST00000219476 KNSTRNQ9Y448 316 aa21.37■■□□□ 1.01
TSC2-201ENST00000219476 NAP1L5Q96NT1 182 aaPredicted RBP21.35■■□□□ 1.01
TSC2-201ENST00000219476 NEUROD2Q15784 382 aa21.34■■□□□ 1.01
TSC2-201ENST00000219476 DRC7Q8IY82 874 aa21.33■■□□□ 1
TSC2-201ENST00000219476 RGL3Q3MIN7 710 aa21.32■■□□□ 1
TSC2-201ENST00000219476 PDE4CQ08493 712 aa21.31■■□□□ 1
TSC2-201ENST00000219476 G3V3G9 751 aa21.3■■□□□ 1
TSC2-201ENST00000219476 DCAF8Q5TAQ9 597 aa21.3■■□□□ 1
TSC2-201ENST00000219476 MTUS2Q5JR59 1369 aa21.29■■□□□ 1
TSC2-201ENST00000219476 MCCP23508 829 aa21.27■■□□□ 1
TSC2-201ENST00000219476 A0A0U1RQG5 324 aaPredicted RBP21.26■□□□□ 0.99
TSC2-201ENST00000219476 CCDC9Q9Y3X0 531 aaKnown RBP21.25■□□□□ 0.99
TSC2-201ENST00000219476 ERICH6BQ5W0A0 696 aa21.24■□□□□ 0.99
TSC2-201ENST00000219476 FRAT1Q92837 279 aaPredicted RBP21.23■□□□□ 0.99
TSC2-201ENST00000219476 U2SURPO15042 1029 aaKnown RBP21.22■□□□□ 0.99
TSC2-201ENST00000219476 MS4A1P11836 297 aa21.22■□□□□ 0.99
TSC2-201ENST00000219476 ZNF330Q9Y3S2 320 aaPredicted RBP21.22■□□□□ 0.99
TSC2-201ENST00000219476 PLEKHD1A6NEE1 506 aa21.21■□□□□ 0.99
TSC2-201ENST00000219476 SOX12O15370 315 aa21.21■□□□□ 0.99
TSC2-201ENST00000219476 AMER1Q5JTC6 1135 aaPredicted RBP21.21■□□□□ 0.99
TSC2-201ENST00000219476 HDGFP51858 240 aaKnown RBP21.2■□□□□ 0.98
TSC2-201ENST00000219476 RRP7BPQ9NSQ0 103 aa21.17■□□□□ 0.98
TSC2-201ENST00000219476 CSB-PGBD3P0DP91 1061 aa21.17■□□□□ 0.98
TSC2-201ENST00000219476 CEP89Q96ST8 783 aa21.17■□□□□ 0.98
TSC2-201ENST00000219476 RTF1Q92541 710 aaKnown RBP21.15■□□□□ 0.98
TSC2-201ENST00000219476 RGS3P49796 1198 aa21.14■□□□□ 0.97
TSC2-201ENST00000219476 HSCBQ8IWL3 235 aa21.12■□□□□ 0.97
TSC2-201ENST00000219476 HIRIP3Q9BW71 556 aaPredicted RBP21.12■□□□□ 0.97
TSC2-201ENST00000219476 VPS53Q5VIR6 699 aa21.11■□□□□ 0.97
TSC2-201ENST00000219476 ZBTB4Q9P1Z0 1013 aaPredicted RBP21.11■□□□□ 0.97
TSC2-201ENST00000219476 SENP3-EIF4A1A0A087X0R7 540 aa21.11■□□□□ 0.97
TSC2-201ENST00000219476 MSNP26038 577 aaKnown RBP21.1■□□□□ 0.97
TSC2-201ENST00000219476 CNKSR2Q8WXI2 1034 aa21.1■□□□□ 0.97
TSC2-201ENST00000219476 MLECQ14165 292 aa21.09■□□□□ 0.97
TSC2-201ENST00000219476 KIAA1211Q6ZU35 1233 aa21.09■□□□□ 0.97
TSC2-201ENST00000219476 RASSF8Q8NHQ8 419 aa21.09■□□□□ 0.97
TSC2-201ENST00000219476 TPM4P67936 248 aa21.07■□□□□ 0.96
TSC2-201ENST00000219476 GORABQ5T7V8 394 aa21.07■□□□□ 0.96
TSC2-201ENST00000219476 FBXO3Q9UK99 471 aa21.06■□□□□ 0.96
TSC2-201ENST00000219476 CARD11Q9BXL7 1154 aa21.06■□□□□ 0.96
TSC2-201ENST00000219476 HTATSF1O43719 755 aaKnown RBP21.05■□□□□ 0.96
TSC2-201ENST00000219476 TAF7LQ5H9L4 462 aa21.05■□□□□ 0.96
TSC2-201ENST00000219476 CFAP44Q96MT7 982 aa21.05■□□□□ 0.96
TSC2-201ENST00000219476 ANO8Q9HCE9 1232 aaPredicted RBP21.05■□□□□ 0.96
TSC2-201ENST00000219476 CCDC34Q96HJ3 373 aa21.04■□□□□ 0.96
TSC2-201ENST00000219476 MARCH6O60337 910 aa21.04■□□□□ 0.96
TSC2-201ENST00000219476 PAK3O75914 559 aaPredicted RBP21.03■□□□□ 0.96
TSC2-201ENST00000219476 HSP90B1P14625 803 aaKnown RBP21.03■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms