RNA–Protein interactions for RNA: ENSMUST00000221370.1

Trim9-208, Transcript of E3 ubiquitin-protein ligase TRIM9, mousemouse

TSL 1 (best) BASIC

Gene Trim9, Length 2,393 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim9-208ENSMUST00000221370 Baz1bQ9Z277 1479 aa30.91■■■□□ 2.54
Trim9-208ENSMUST00000221370 Ankrd26Q811D2 1581 aa30.88■■■□□ 2.53
Trim9-208ENSMUST00000221370 Ap3b1Q9Z1T1 1105 aa30.87■■■□□ 2.53
Trim9-208ENSMUST00000221370 BlmO88700 1416 aa30.77■■■□□ 2.52
Trim9-208ENSMUST00000221370 Pcf11G3X9Z4 1553 aa30.76■■■□□ 2.51
Trim9-208ENSMUST00000221370 Eid3Q3V124 375 aa30.74■■■□□ 2.51
Trim9-208ENSMUST00000221370 Slx4Q6P1D7 1565 aa30.71■■■□□ 2.51
Trim9-208ENSMUST00000221370 Lmo7E9PYF4 1699 aaKnown RBP30.71■■■□□ 2.51
Trim9-208ENSMUST00000221370 CntlnA2AM05 1397 aa30.67■■■□□ 2.5
Trim9-208ENSMUST00000221370 Carmil1Q6EDY6 1374 aa30.64■■■□□ 2.5
Trim9-208ENSMUST00000221370 Efcab5A0JP43 1406 aa30.64■■■□□ 2.49
Trim9-208ENSMUST00000221370 Peg3Q3URU2 1571 aa30.6■■■□□ 2.49
Trim9-208ENSMUST00000221370 CenpbP27790 599 aa30.6■■■□□ 2.49
Trim9-208ENSMUST00000221370 UacaQ8CGB3 1411 aa30.55■■■□□ 2.48
Trim9-208ENSMUST00000221370 Phldb1Q6PDH0 1371 aaKnown RBP30.54■■■□□ 2.48
Trim9-208ENSMUST00000221370 Cux1P53564 1515 aa30.53■■■□□ 2.48
Trim9-208ENSMUST00000221370 Fhad1A6PWD2 1420 aa30.53■■■□□ 2.48
Trim9-208ENSMUST00000221370 Ankrd36D3Z4K0 1415 aa30.53■■■□□ 2.48
Trim9-208ENSMUST00000221370 Ccer2J3QPU5 274 aa30.51■■■□□ 2.48
Trim9-208ENSMUST00000221370 Tnnt3Q9QZ47 272 aa30.51■■■□□ 2.47
Trim9-208ENSMUST00000221370 Fyco1Q8VDC1 1437 aa30.51■■■□□ 2.47
Trim9-208ENSMUST00000221370 3425401B19RikD3Z1D3 1412 aa30.5■■■□□ 2.47
Trim9-208ENSMUST00000221370 Mia2Q91ZV0 1396 aa30.5■■■□□ 2.47
Trim9-208ENSMUST00000221370 Cux2P70298 1426 aa30.49■■■□□ 2.47
Trim9-208ENSMUST00000221370 Urb2E9Q7L1 1524 aaKnown RBP30.47■■■□□ 2.47
Trim9-208ENSMUST00000221370 Myt1Q8CFC2 1127 aa30.43■■■□□ 2.46
Trim9-208ENSMUST00000221370 LrpprcQ6PB66 1392 aaKnown RBP30.43■■■□□ 2.46
Trim9-208ENSMUST00000221370 PogzQ8BZH4 1409 aaKnown RBP30.42■■■□□ 2.46
Trim9-208ENSMUST00000221370 Vps8Q0P5W1 1427 aa30.42■■■□□ 2.46
Trim9-208ENSMUST00000221370 Fam50aQ9WV03 339 aaKnown RBP30.41■■■□□ 2.46
Trim9-208ENSMUST00000221370 Rpap1Q80TE0 1409 aa30.39■■■□□ 2.45
Trim9-208ENSMUST00000221370 Duox2A2AQ99 1517 aa30.38■■■□□ 2.45
Trim9-208ENSMUST00000221370 Npm1Q61937 292 aaKnown RBP30.37■■■□□ 2.45
Trim9-208ENSMUST00000221370 Polr1aO35134 1717 aaKnown RBP30.33■■■□□ 2.45
Trim9-208ENSMUST00000221370 Crocc2F6XLV1 1638 aa30.32■■■□□ 2.44
Trim9-208ENSMUST00000221370 NclP09405 707 aaKnown RBP30.32■■■□□ 2.44
Trim9-208ENSMUST00000221370 SynmQ70IV5 1561 aa30.31■■■□□ 2.44
Trim9-208ENSMUST00000221370 Dhx29Q6PGC1 1365 aaKnown RBP30.31■■■□□ 2.44
Trim9-208ENSMUST00000221370 Lmod2Q3UHZ5 550 aa30.31■■■□□ 2.44
Trim9-208ENSMUST00000221370 Thoc2B1AZI6 1594 aaKnown RBP30.3■■■□□ 2.44
Trim9-208ENSMUST00000221370 Naip2Q9QUK4 1447 aa30.3■■■□□ 2.44
Trim9-208ENSMUST00000221370 Camsap2Q8C1B1 1461 aa30.3■■■□□ 2.44
Trim9-208ENSMUST00000221370 Gm1043A0A140LJC2 1431 aa30.29■■■□□ 2.44
Trim9-208ENSMUST00000221370 Gm13697A2AK42 830 aa30.29■■■□□ 2.44
Trim9-208ENSMUST00000221370 Stra8P70278 393 aa30.27■■■□□ 2.44
Trim9-208ENSMUST00000221370 Aebp1Q640N1 1128 aa30.25■■■□□ 2.43
Trim9-208ENSMUST00000221370 Gm7298A0A0N4SVU1 1476 aa30.24■■■□□ 2.43
Trim9-208ENSMUST00000221370 Hnrnpul2Q00PI9 745 aaKnown RBP30.22■■■□□ 2.43
Trim9-208ENSMUST00000221370 Ubl4bQ9CQ84 188 aa30.22■■■□□ 2.43
Trim9-208ENSMUST00000221370 Hspa5P20029 655 aaKnown RBP30.17■■■□□ 2.42
Trim9-208ENSMUST00000221370 Samd9lQ69Z37 1561 aa30.16■■■□□ 2.42
Trim9-208ENSMUST00000221370 Fam135aQ6NS59 1506 aa30.13■■■□□ 2.41
Trim9-208ENSMUST00000221370 Gm38655A0A286YDK6 273 aa30.12■■■□□ 2.41
Trim9-208ENSMUST00000221370 Znf710Q3U288 666 aa30.12■■■□□ 2.41
Trim9-208ENSMUST00000221370 A2mQ6GQT1 1474 aa30.1■■■□□ 2.41
Trim9-208ENSMUST00000221370 Lmtk2Q3TYD6 1471 aa30.08■■■□□ 2.41
Trim9-208ENSMUST00000221370 Fhod3Q76LL6 1578 aa30.07■■■□□ 2.4
Trim9-208ENSMUST00000221370 Cul7Q8VE73 1689 aa30.07■■■□□ 2.4
Trim9-208ENSMUST00000221370 Mapk8ip2Q9ERE9 830 aa30.04■■■□□ 2.4
Trim9-208ENSMUST00000221370 Naip5Q9R016 1403 aa30.03■■■□□ 2.4
Trim9-208ENSMUST00000221370 Dennd4bQ3U1Y4 1499 aa30.02■■■□□ 2.4
Trim9-208ENSMUST00000221370 Ncoa2Q61026 1462 aa30■■■□□ 2.39
Trim9-208ENSMUST00000221370 Kif21aQ9QXL2 1672 aa29.99■■■□□ 2.39
Trim9-208ENSMUST00000221370 Ccnb3Q810T2 1396 aa29.97■■■□□ 2.39
Trim9-208ENSMUST00000221370 Rad54l2Q99NG0 1466 aa29.97■■■□□ 2.39
Trim9-208ENSMUST00000221370 EprsQ8CGC7 1512 aaKnown RBP29.95■■■□□ 2.38
Trim9-208ENSMUST00000221370 SafbD3YXK2 937 aaKnown RBP29.92■■■□□ 2.38
Trim9-208ENSMUST00000221370 Abca5Q8K448 1642 aa29.91■■■□□ 2.38
Trim9-208ENSMUST00000221370 Smg6P61406 1418 aaKnown RBP29.89■■■□□ 2.38
Trim9-208ENSMUST00000221370 Gpatch8A2A6A1 1505 aa29.88■■■□□ 2.37
Trim9-208ENSMUST00000221370 Gcc2Q8CHG3 1679 aa29.88■■■□□ 2.37
Trim9-208ENSMUST00000221370 CadpsQ80TJ1 1355 aa29.86■■■□□ 2.37
Trim9-208ENSMUST00000221370 Pla2r1Q62028 1487 aa29.86■■■□□ 2.37
Trim9-208ENSMUST00000221370 Setbp1Q9Z180 1582 aa29.83■■■□□ 2.37
Trim9-208ENSMUST00000221370 Rfx7F8VPJ6 1459 aa29.83■■■□□ 2.37
Trim9-208ENSMUST00000221370 Kif27Q7M6Z4 1394 aa29.8■■■□□ 2.36
Trim9-208ENSMUST00000221370 Pprc1Q6NZN1 1644 aa29.77■■■□□ 2.36
Trim9-208ENSMUST00000221370 Chic2Q9D9G3 165 aa29.76■■■□□ 2.35
Trim9-208ENSMUST00000221370 Ube2uB1AUC4 352 aa29.75■■■□□ 2.35
Trim9-208ENSMUST00000221370 NexmifQ5DTT1 1515 aa29.75■■■□□ 2.35
Trim9-208ENSMUST00000221370 Magi3Q9EQJ9 1476 aa29.75■■■□□ 2.35
Trim9-208ENSMUST00000221370 Fam71e1A1L3C1 212 aa29.72■■■□□ 2.35
Trim9-208ENSMUST00000221370 Sin3aQ60520 1274 aaKnown RBP29.72■■■□□ 2.35
Trim9-208ENSMUST00000221370 Mphosph9A6H5Y1 991 aa29.71■■■□□ 2.35
Trim9-208ENSMUST00000221370 Anp32aO35381 247 aa29.7■■■□□ 2.34
Trim9-208ENSMUST00000221370 BC005561E9Q5E2 1589 aa29.69■■■□□ 2.34
Trim9-208ENSMUST00000221370 Adamts12Q811B3 1600 aa29.67■■■□□ 2.34
Trim9-208ENSMUST00000221370 Soga1E1U8D0 1418 aa29.66■■■□□ 2.34
Trim9-208ENSMUST00000221370 Grin2aP35436 1464 aa29.65■■■□□ 2.34
Trim9-208ENSMUST00000221370 Ift140E9PY46 1464 aa29.62■■■□□ 2.33
Trim9-208ENSMUST00000221370 Mug1P28665 1476 aa29.62■■■□□ 2.33
Trim9-208ENSMUST00000221370 Calr4Q3TQS0 420 aa29.62■■■□□ 2.33
Trim9-208ENSMUST00000221370 Rprd2Q6NXI6 1469 aaKnown RBP29.6■■■□□ 2.33
Trim9-208ENSMUST00000221370 Ncoa1P70365 1447 aa29.59■■■□□ 2.33
Trim9-208ENSMUST00000221370 WizO88286 1684 aaKnown RBP29.57■■■□□ 2.32
Trim9-208ENSMUST00000221370 Abcc5Q9R1X5 1436 aa29.55■■■□□ 2.32
Trim9-208ENSMUST00000221370 Usp47Q8BY87 1376 aa29.52■■■□□ 2.32
Trim9-208ENSMUST00000221370 Plekhh2Q8C115 1491 aa29.52■■■□□ 2.32
Trim9-208ENSMUST00000221370 Cabp1Q9JLK7 227 aa29.51■■■□□ 2.31
Trim9-208ENSMUST00000221370 Disp1Q3TDN0 1521 aa29.5■■■□□ 2.31
Retrieved 100 of 22,080 RNA–protein pairs in 28.3 ms