RNA–Protein interactions for RNA: ENSMUST00000215817.1

Upf1-202, Transcript of Regulator of nonsense transcripts 1, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Upf1, Length 4,518 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Upf1-202ENSMUST00000215817 Rapgef2Q8CHG7 1496 aa21.97■■□□□ 1.11
Upf1-202ENSMUST00000215817 Aebp1Q640N1 1128 aa21.97■■□□□ 1.11
Upf1-202ENSMUST00000215817 Ppp1r18Q8BQ30 594 aa21.95■■□□□ 1.1
Upf1-202ENSMUST00000215817 Atp1b4Q99ME6 356 aa21.94■■□□□ 1.1
Upf1-202ENSMUST00000215817 Cdk11bP24788 784 aaKnown RBP21.93■■□□□ 1.1
Upf1-202ENSMUST00000215817 Urb2E9Q7L1 1524 aaKnown RBP21.93■■□□□ 1.1
Upf1-202ENSMUST00000215817 Kif27Q7M6Z4 1394 aa21.91■■□□□ 1.1
Upf1-202ENSMUST00000215817 Pabpn1Q8CCS6 302 aaKnown RBP21.9■■□□□ 1.1
Upf1-202ENSMUST00000215817 Safb2Q80YR5 991 aaKnown RBP21.88■■□□□ 1.09
Upf1-202ENSMUST00000215817 Myt1Q8CFC2 1127 aa21.86■■□□□ 1.09
Upf1-202ENSMUST00000215817 Rad54l2Q99NG0 1466 aa21.84■■□□□ 1.09
Upf1-202ENSMUST00000215817 Carmil1Q6EDY6 1374 aa21.83■■□□□ 1.09
Upf1-202ENSMUST00000215817 Gm13695A2AK44 830 aa21.83■■□□□ 1.09
Upf1-202ENSMUST00000215817 Amer1Q7TS75 1132 aa21.8■■□□□ 1.08
Upf1-202ENSMUST00000215817 Duox2A2AQ99 1517 aa21.8■■□□□ 1.08
Upf1-202ENSMUST00000215817 Efcab5A0JP43 1406 aa21.77■■□□□ 1.08
Upf1-202ENSMUST00000215817 Rrp7aQ9D1C9 280 aaKnown RBP21.76■■□□□ 1.07
Upf1-202ENSMUST00000215817 PogzQ8BZH4 1409 aaKnown RBP21.71■■□□□ 1.07
Upf1-202ENSMUST00000215817 Plb1Q3TTY0 1478 aa21.71■■□□□ 1.07
Upf1-202ENSMUST00000215817 WrnO09053 1401 aa21.67■■□□□ 1.06
Upf1-202ENSMUST00000215817 Clstn2Q9ER65 966 aa21.65■■□□□ 1.06
Upf1-202ENSMUST00000215817 Shroom4Q1W617 1475 aa21.65■■□□□ 1.06
Upf1-202ENSMUST00000215817 Ccer2J3QPU5 274 aa21.64■■□□□ 1.06
Upf1-202ENSMUST00000215817 Prdm10Q3UTQ7 1184 aa21.63■■□□□ 1.05
Upf1-202ENSMUST00000215817 Grin2bQ01097 1482 aa21.63■■□□□ 1.05
Upf1-202ENSMUST00000215817 Soga1E1U8D0 1418 aa21.63■■□□□ 1.05
Upf1-202ENSMUST00000215817 Mtus2Q3UHD3 1353 aa21.62■■□□□ 1.05
Upf1-202ENSMUST00000215817 Mapk8ip2Q9ERE9 830 aa21.61■■□□□ 1.05
Upf1-202ENSMUST00000215817 PtprkP35822 1457 aa21.61■■□□□ 1.05
Upf1-202ENSMUST00000215817 DiexfQ8BTT6 772 aaKnown RBP21.61■■□□□ 1.05
Upf1-202ENSMUST00000215817 Jph4Q80WT0 628 aa21.6■■□□□ 1.05
Upf1-202ENSMUST00000215817 Top2aQ01320 1528 aaKnown RBP21.6■■□□□ 1.05
Upf1-202ENSMUST00000215817 MyclP10166 368 aa21.58■■□□□ 1.05
Upf1-202ENSMUST00000215817 P3h3Q8CG70 732 aa21.58■■□□□ 1.05
Upf1-202ENSMUST00000215817 CntlnA2AM05 1397 aa21.54■■□□□ 1.04
Upf1-202ENSMUST00000215817 Camsap1A2AHC3 1581 aa21.53■■□□□ 1.04
Upf1-202ENSMUST00000215817 NrkQ9R0G8 1455 aa21.52■■□□□ 1.04
Upf1-202ENSMUST00000215817 Lamc3Q9R0B6 1581 aa21.52■■□□□ 1.04
Upf1-202ENSMUST00000215817 Fyco1Q8VDC1 1437 aa21.51■■□□□ 1.03
Upf1-202ENSMUST00000215817 Supt5hO55201 1082 aaKnown RBP21.51■■□□□ 1.03
Upf1-202ENSMUST00000215817 Lemd3Q9WU40 921 aa21.51■■□□□ 1.03
Upf1-202ENSMUST00000215817 Anp32bQ9EST5 272 aaKnown RBP21.5■■□□□ 1.03
Upf1-202ENSMUST00000215817 Top2bQ64511 1612 aa21.5■■□□□ 1.03
Upf1-202ENSMUST00000215817 Rgl3Q3UYI5 709 aa21.5■■□□□ 1.03
Upf1-202ENSMUST00000215817 Cabp1Q9JLK7 227 aa21.5■■□□□ 1.03
Upf1-202ENSMUST00000215817 Hdac5Q9Z2V6 1113 aa21.47■■□□□ 1.03
Upf1-202ENSMUST00000215817 NrdcQ8BHG1 1161 aa21.43■■□□□ 1.02
Upf1-202ENSMUST00000215817 Fgd6Q69ZL1 1399 aa21.43■■□□□ 1.02
Upf1-202ENSMUST00000215817 Ift140E9PY46 1464 aa21.43■■□□□ 1.02
Upf1-202ENSMUST00000215817 Fam135aQ6NS59 1506 aa21.43■■□□□ 1.02
Upf1-202ENSMUST00000215817 Arhgap35Q91YM2 1499 aa21.42■■□□□ 1.02
Upf1-202ENSMUST00000215817 Crocc2F6XLV1 1638 aa21.42■■□□□ 1.02
Upf1-202ENSMUST00000215817 Thoc2B1AZI6 1594 aaKnown RBP21.41■■□□□ 1.02
Upf1-202ENSMUST00000215817 Sart1Q9Z315 806 aaKnown RBP21.38■■□□□ 1.01
Upf1-202ENSMUST00000215817 Kdm2aP59997 1161 aa21.37■■□□□ 1.01
Upf1-202ENSMUST00000215817 MlecQ6ZQI3 291 aaKnown RBP21.37■■□□□ 1.01
Upf1-202ENSMUST00000215817 Grwd1Q810D6 446 aaKnown RBP21.37■■□□□ 1.01
Upf1-202ENSMUST00000215817 Stk24Q99KH8 431 aa21.37■■□□□ 1.01
Upf1-202ENSMUST00000215817 Ccnb3Q810T2 1396 aa21.37■■□□□ 1.01
Upf1-202ENSMUST00000215817 Cc2d2bA0A286YDU8 1405 aa21.36■■□□□ 1.01
Upf1-202ENSMUST00000215817 Mroh2bQ7M6Y6 1581 aa21.34■■□□□ 1.01
Upf1-202ENSMUST00000215817 Dhx57Q6P5D3 1388 aaKnown RBP21.34■■□□□ 1.01
Upf1-202ENSMUST00000215817 Map4P27546 1125 aaKnown RBP21.33■■□□□ 1.01
Upf1-202ENSMUST00000215817 Mroh3A0A1D5RM54 893 aa21.32■■□□□ 1
Upf1-202ENSMUST00000215817 Stra8P70278 393 aa21.3■■□□□ 1
Upf1-202ENSMUST00000215817 Gm7298A0A0N4SVU1 1476 aa21.29■■□□□ 1
Upf1-202ENSMUST00000215817 Kif3bQ61771 747 aa21.29■■□□□ 1
Upf1-202ENSMUST00000215817 EprsQ8CGC7 1512 aaKnown RBP21.28■■□□□ 1
Upf1-202ENSMUST00000215817 Tdrd9Q14BI7 1383 aa21.25■□□□□ 0.99
Upf1-202ENSMUST00000215817 Mia2Q91ZV0 1396 aa21.25■□□□□ 0.99
Upf1-202ENSMUST00000215817 Arhgap31A6X8Z5 1425 aa21.25■□□□□ 0.99
Upf1-202ENSMUST00000215817 Trak1Q6PD31 939 aa21.25■□□□□ 0.99
Upf1-202ENSMUST00000215817 CadpsQ80TJ1 1355 aa21.24■□□□□ 0.99
Upf1-202ENSMUST00000215817 Grin2aP35436 1464 aa21.21■□□□□ 0.99
Upf1-202ENSMUST00000215817 Gm14025A2AP89 1413 aa21.21■□□□□ 0.99
Upf1-202ENSMUST00000215817 Hspa5P20029 655 aaKnown RBP21.2■□□□□ 0.98
Upf1-202ENSMUST00000215817 Nop58Q6DFW4 536 aaKnown RBP21.2■□□□□ 0.98
Upf1-202ENSMUST00000215817 Polr1aO35134 1717 aaKnown RBP21.18■□□□□ 0.98
Upf1-202ENSMUST00000215817 Pkd2O35245 966 aa21.16■□□□□ 0.98
Upf1-202ENSMUST00000215817 Eif5bQ05D44 1216 aaKnown RBP21.16■□□□□ 0.98
Upf1-202ENSMUST00000215817 ClspnQ80YR7 1315 aa21.16■□□□□ 0.98
Upf1-202ENSMUST00000215817 Neo1P97798 1493 aa21.15■□□□□ 0.98
Upf1-202ENSMUST00000215817 Srpk2O54781 681 aaKnown RBP21.13■□□□□ 0.97
Upf1-202ENSMUST00000215817 Map3k1P53349 1493 aa21.13■□□□□ 0.97
Upf1-202ENSMUST00000215817 Plekhh2Q8C115 1491 aa21.13■□□□□ 0.97
Upf1-202ENSMUST00000215817 SynmQ70IV5 1561 aa21.13■□□□□ 0.97
Upf1-202ENSMUST00000215817 Ncoa2Q61026 1462 aa21.12■□□□□ 0.97
Upf1-202ENSMUST00000215817 Gm20521D3Z5F7 333 aa21.11■□□□□ 0.97
Upf1-202ENSMUST00000215817 Mphosph9A6H5Y1 991 aa21.1■□□□□ 0.97
Upf1-202ENSMUST00000215817 Kif21aQ9QXL2 1672 aa21.08■□□□□ 0.97
Upf1-202ENSMUST00000215817 Nlrp6Q91WS2 869 aa21.08■□□□□ 0.96
Upf1-202ENSMUST00000215817 Sall2Q9QX96 1004 aa21.06■□□□□ 0.96
Upf1-202ENSMUST00000215817 Arap1Q4LDD4 1452 aa21.06■□□□□ 0.96
Upf1-202ENSMUST00000215817 Disp1Q3TDN0 1521 aa21.05■□□□□ 0.96
Upf1-202ENSMUST00000215817 Naip1Q9QWK5 1403 aa21.05■□□□□ 0.96
Upf1-202ENSMUST00000215817 Arid4bA2CG63 1314 aaKnown RBP21.04■□□□□ 0.96
Upf1-202ENSMUST00000215817 Nup155Q99P88 1391 aaKnown RBP21.04■□□□□ 0.96
Upf1-202ENSMUST00000215817 IqubQ8CDK3 788 aa20.99■□□□□ 0.95
Upf1-202ENSMUST00000215817 Card11Q8CIS0 1159 aa20.99■□□□□ 0.95
Upf1-202ENSMUST00000215817 TchhA0A0B4J1F9 1599 aa20.99■□□□□ 0.95
Retrieved 100 of 22,080 RNA–protein pairs in 25.9 ms