RNA–Protein interactions for RNA: ENSMUST00000210594.1

Clcn4-206, Transcript of H(+)/Cl(-) exchange transporter 4, mousemouse

APPRIS ALT2 TSL 5 BASIC

Gene Clcn4, Length 2,539 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn4-206ENSMUST00000210594 Carmil1Q6EDY6 1374 aa27.8■■■□□ 2.04
Clcn4-206ENSMUST00000210594 Aebp2Q9Z248 504 aaKnown RBP27.8■■■□□ 2.04
Clcn4-206ENSMUST00000210594 Naip1Q9QWK5 1403 aa27.79■■■□□ 2.04
Clcn4-206ENSMUST00000210594 BlmO88700 1416 aa27.76■■■□□ 2.03
Clcn4-206ENSMUST00000210594 Pcf11G3X9Z4 1553 aa27.73■■■□□ 2.03
Clcn4-206ENSMUST00000210594 ClspnQ80YR7 1315 aa27.69■■■□□ 2.02
Clcn4-206ENSMUST00000210594 Cux1P53564 1515 aa27.67■■■□□ 2.02
Clcn4-206ENSMUST00000210594 Lmo7E9PYF4 1699 aaKnown RBP27.67■■■□□ 2.02
Clcn4-206ENSMUST00000210594 Neurod1Q60867 357 aa27.67■■■□□ 2.02
Clcn4-206ENSMUST00000210594 Slx4Q6P1D7 1565 aa27.65■■■□□ 2.02
Clcn4-206ENSMUST00000210594 CntlnA2AM05 1397 aa27.65■■■□□ 2.02
Clcn4-206ENSMUST00000210594 Kdm5bQ80Y84 1544 aa27.64■■■□□ 2.02
Clcn4-206ENSMUST00000210594 Dhx29Q6PGC1 1365 aaKnown RBP27.63■■■□□ 2.01
Clcn4-206ENSMUST00000210594 SynmQ70IV5 1561 aa27.62■■■□□ 2.01
Clcn4-206ENSMUST00000210594 TchhA0A0B4J1F9 1599 aa27.61■■■□□ 2.01
Clcn4-206ENSMUST00000210594 Samd9lQ69Z37 1561 aa27.58■■■□□ 2.01
Clcn4-206ENSMUST00000210594 Urb2E9Q7L1 1524 aaKnown RBP27.57■■■□□ 2
Clcn4-206ENSMUST00000210594 Fyco1Q8VDC1 1437 aa27.56■■■□□ 2
Clcn4-206ENSMUST00000210594 Polr1aO35134 1717 aaKnown RBP27.53■■■□□ 2
Clcn4-206ENSMUST00000210594 Lmod2Q3UHZ5 550 aa27.51■■■□□ 2
Clcn4-206ENSMUST00000210594 Peg3Q3URU2 1571 aa27.49■■□□□ 1.99
Clcn4-206ENSMUST00000210594 Rpap1Q80TE0 1409 aa27.48■■□□□ 1.99
Clcn4-206ENSMUST00000210594 Rad54l2Q99NG0 1466 aa27.47■■□□□ 1.99
Clcn4-206ENSMUST00000210594 Aebp1Q640N1 1128 aa27.46■■□□□ 1.99
Clcn4-206ENSMUST00000210594 Crocc2F6XLV1 1638 aa27.46■■□□□ 1.99
Clcn4-206ENSMUST00000210594 Eid3Q3V124 375 aa27.45■■□□□ 1.99
Clcn4-206ENSMUST00000210594 Fam50aQ9WV03 339 aaKnown RBP27.4■■□□□ 1.98
Clcn4-206ENSMUST00000210594 Kif21aQ9QXL2 1672 aa27.39■■□□□ 1.97
Clcn4-206ENSMUST00000210594 Mrc2Q64449 1479 aa27.38■■□□□ 1.97
Clcn4-206ENSMUST00000210594 Ppargc1bQ8VHJ7 1014 aa27.37■■□□□ 1.97
Clcn4-206ENSMUST00000210594 3425401B19RikD3Z1D3 1412 aa27.35■■□□□ 1.97
Clcn4-206ENSMUST00000210594 Gm1043A0A140LJC2 1431 aa27.32■■□□□ 1.96
Clcn4-206ENSMUST00000210594 EprsQ8CGC7 1512 aaKnown RBP27.31■■□□□ 1.96
Clcn4-206ENSMUST00000210594 Nop58Q6DFW4 536 aaKnown RBP27.28■■□□□ 1.96
Clcn4-206ENSMUST00000210594 Pla2r1Q62028 1487 aa27.27■■□□□ 1.96
Clcn4-206ENSMUST00000210594 Mia2Q91ZV0 1396 aa27.26■■□□□ 1.96
Clcn4-206ENSMUST00000210594 Cdk11bP24788 784 aaKnown RBP27.26■■□□□ 1.95
Clcn4-206ENSMUST00000210594 Fhad1A6PWD2 1420 aa27.24■■□□□ 1.95
Clcn4-206ENSMUST00000210594 Anks4bQ8K3X6 423 aa27.23■■□□□ 1.95
Clcn4-206ENSMUST00000210594 Ccer2J3QPU5 274 aa27.22■■□□□ 1.95
Clcn4-206ENSMUST00000210594 Magi3Q9EQJ9 1476 aa27.21■■□□□ 1.95
Clcn4-206ENSMUST00000210594 Gm7298A0A0N4SVU1 1476 aa27.21■■□□□ 1.95
Clcn4-206ENSMUST00000210594 CadpsQ80TJ1 1355 aa27.2■■□□□ 1.94
Clcn4-206ENSMUST00000210594 Abca5Q8K448 1642 aa27.17■■□□□ 1.94
Clcn4-206ENSMUST00000210594 Grin2aP35436 1464 aa27.16■■□□□ 1.94
Clcn4-206ENSMUST00000210594 Plb1Q3TTY0 1478 aa27.16■■□□□ 1.94
Clcn4-206ENSMUST00000210594 Vps8Q0P5W1 1427 aa27.16■■□□□ 1.94
Clcn4-206ENSMUST00000210594 Gpatch8A2A6A1 1505 aa27.15■■□□□ 1.94
Clcn4-206ENSMUST00000210594 Naip2Q9QUK4 1447 aa27.14■■□□□ 1.94
Clcn4-206ENSMUST00000210594 Ankrd36D3Z4K0 1415 aa27.11■■□□□ 1.93
Clcn4-206ENSMUST00000210594 Disp1Q3TDN0 1521 aa27.1■■□□□ 1.93
Clcn4-206ENSMUST00000210594 Kif27Q7M6Z4 1394 aa27.09■■□□□ 1.93
Clcn4-206ENSMUST00000210594 Dnajc5bQ9CQ94 199 aa27.09■■□□□ 1.93
Clcn4-206ENSMUST00000210594 Ccnb3Q810T2 1396 aa27.09■■□□□ 1.93
Clcn4-206ENSMUST00000210594 WizO88286 1684 aaKnown RBP27.06■■□□□ 1.92
Clcn4-206ENSMUST00000210594 Lmtk2Q3TYD6 1471 aa27.06■■□□□ 1.92
Clcn4-206ENSMUST00000210594 A2mQ6GQT1 1474 aa27.06■■□□□ 1.92
Clcn4-206ENSMUST00000210594 Adamts12Q811B3 1600 aa27.06■■□□□ 1.92
Clcn4-206ENSMUST00000210594 Soga1E1U8D0 1418 aa27.01■■□□□ 1.91
Clcn4-206ENSMUST00000210594 UacaQ8CGB3 1411 aa26.99■■□□□ 1.91
Clcn4-206ENSMUST00000210594 NclP09405 707 aaKnown RBP26.98■■□□□ 1.91
Clcn4-206ENSMUST00000210594 Setd1bQ8CFT2 1985 aa26.95■■□□□ 1.91
Clcn4-206ENSMUST00000210594 Hspa5P20029 655 aaKnown RBP26.94■■□□□ 1.9
Clcn4-206ENSMUST00000210594 Gcc2Q8CHG3 1679 aa26.93■■□□□ 1.9
Clcn4-206ENSMUST00000210594 Ift140E9PY46 1464 aa26.93■■□□□ 1.9
Clcn4-206ENSMUST00000210594 Chic2Q9D9G3 165 aa26.93■■□□□ 1.9
Clcn4-206ENSMUST00000210594 NexmifQ5DTT1 1515 aa26.92■■□□□ 1.9
Clcn4-206ENSMUST00000210594 Ube2uB1AUC4 352 aa26.91■■□□□ 1.9
Clcn4-206ENSMUST00000210594 BC005561E9Q5E2 1589 aa26.91■■□□□ 1.9
Clcn4-206ENSMUST00000210594 PxdnQ3UQ28 1475 aa26.91■■□□□ 1.9
Clcn4-206ENSMUST00000210594 Pbrm1Q8BSQ9 1634 aaKnown RBP26.89■■□□□ 1.89
Clcn4-206ENSMUST00000210594 Nup160Q9Z0W3 1402 aaKnown RBP26.87■■□□□ 1.89
Clcn4-206ENSMUST00000210594 Abca16E9PWJ7 1678 aa26.86■■□□□ 1.89
Clcn4-206ENSMUST00000210594 Dennd4bQ3U1Y4 1499 aa26.85■■□□□ 1.89
Clcn4-206ENSMUST00000210594 WrnO09053 1401 aa26.85■■□□□ 1.89
Clcn4-206ENSMUST00000210594 Fhod3Q76LL6 1578 aa26.79■■□□□ 1.88
Clcn4-206ENSMUST00000210594 Cul7Q8VE73 1689 aa26.77■■□□□ 1.88
Clcn4-206ENSMUST00000210594 Mug1P28665 1476 aa26.77■■□□□ 1.88
Clcn4-206ENSMUST00000210594 Arhgap27A2AB59 869 aa26.77■■□□□ 1.88
Clcn4-206ENSMUST00000210594 Gm13697A2AK42 830 aa26.77■■□□□ 1.88
Clcn4-206ENSMUST00000210594 Rapgef6Q5NCJ1 1609 aa26.74■■□□□ 1.87
Clcn4-206ENSMUST00000210594 Rfx7F8VPJ6 1459 aa26.74■■□□□ 1.87
Clcn4-206ENSMUST00000210594 Ncoa3O09000 1398 aa26.74■■□□□ 1.87
Clcn4-206ENSMUST00000210594 Csrnp3P59055 597 aa26.73■■□□□ 1.87
Clcn4-206ENSMUST00000210594 Camsap2Q8C1B1 1461 aa26.73■■□□□ 1.87
Clcn4-206ENSMUST00000210594 Cc2d2bA0A286YDU8 1405 aa26.71■■□□□ 1.87
Clcn4-206ENSMUST00000210594 Cabp1Q9JLK7 227 aa26.69■■□□□ 1.86
Clcn4-206ENSMUST00000210594 Ncoa2Q61026 1462 aa26.69■■□□□ 1.86
Clcn4-206ENSMUST00000210594 Mphosph9A6H5Y1 991 aa26.68■■□□□ 1.86
Clcn4-206ENSMUST00000210594 Naip5Q9R016 1403 aa26.68■■□□□ 1.86
Clcn4-206ENSMUST00000210594 Mapk8ip2Q9ERE9 830 aa26.67■■□□□ 1.86
Clcn4-206ENSMUST00000210594 Abcc5Q9R1X5 1436 aa26.67■■□□□ 1.86
Clcn4-206ENSMUST00000210594 Lrriq1Q0P5X1 1673 aa26.66■■□□□ 1.86
Clcn4-206ENSMUST00000210594 Shroom2A2ALU4 1481 aa26.66■■□□□ 1.86
Clcn4-206ENSMUST00000210594 Abcc2Q8VI47 1543 aa26.65■■□□□ 1.86
Clcn4-206ENSMUST00000210594 Plekhh2Q8C115 1491 aa26.65■■□□□ 1.86
Clcn4-206ENSMUST00000210594 Arhgef11Q68FM7 1552 aa26.62■■□□□ 1.85
Clcn4-206ENSMUST00000210594 Arhgef40Q3UPH7 1517 aa26.61■■□□□ 1.85
Clcn4-206ENSMUST00000210594 Cdc42bpaQ3UU96 1719 aa26.58■■□□□ 1.85
Clcn4-206ENSMUST00000210594 Setbp1Q9Z180 1582 aa26.57■■□□□ 1.84
Retrieved 100 of 22,080 RNA–protein pairs in 13.5 ms