RNA–Protein interactions for RNA: ENSMUST00000208530.1

Clhc1-204, Transcript of Clathrin heavy chain linker domain-containing protein 1, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Clhc1, Length 2,062 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Clhc1-204ENSMUST00000208530 Hdac5Q9Z2V6 1113 aa8.9□□□□□ -0.99
Clhc1-204ENSMUST00000208530 Gm45233A0A0N4SVE0 221 aa8.89□□□□□ -0.99
Clhc1-204ENSMUST00000208530 Gm13697A2AK42 830 aa8.85□□□□□ -0.99
Clhc1-204ENSMUST00000208530 MycnP03966 462 aaKnown RBP8.85□□□□□ -0.99
Clhc1-204ENSMUST00000208530 Zbtb7bQ64321 544 aa8.85□□□□□ -0.99
Clhc1-204ENSMUST00000208530 Pdap1Q3UHX2 181 aaKnown RBP8.82□□□□□ -1
Clhc1-204ENSMUST00000208530 Atad2Q8CDM1 1040 aa8.81□□□□□ -1
Clhc1-204ENSMUST00000208530 Arhgef1Q61210 920 aaKnown RBP8.8□□□□□ -1
Clhc1-204ENSMUST00000208530 Fam181bQ80VF6 417 aa8.78□□□□□ -1
Clhc1-204ENSMUST00000208530 Tulp1Q9Z273 543 aa8.77□□□□□ -1.01
Clhc1-204ENSMUST00000208530 Pak3Q61036 559 aa8.76□□□□□ -1.01
Clhc1-204ENSMUST00000208530 Pcdh10E9PXQ7 1057 aa8.76□□□□□ -1.01
Clhc1-204ENSMUST00000208530 Pde4dQ01063 747 aa8.76□□□□□ -1.01
Clhc1-204ENSMUST00000208530 C1qbpO35658 278 aa8.75□□□□□ -1.01
Clhc1-204ENSMUST00000208530 Znf516Q7TSH3 1157 aa8.73□□□□□ -1.01
Clhc1-204ENSMUST00000208530 St18Q80TY4 1045 aa8.72□□□□□ -1.01
Clhc1-204ENSMUST00000208530 Znf579Q80VM4 562 aa8.7□□□□□ -1.02
Clhc1-204ENSMUST00000208530 Pelp1Q9DBD5 1123 aaKnown RBP8.68□□□□□ -1.02
Clhc1-204ENSMUST00000208530 Kank4Q6P9J5 1016 aa8.67□□□□□ -1.02
Clhc1-204ENSMUST00000208530 Repin1Q5U4E2 545 aa8.66□□□□□ -1.02
Clhc1-204ENSMUST00000208530 Hmx1O70218 332 aa8.65□□□□□ -1.02
Clhc1-204ENSMUST00000208530 Fam117bQ3U3E2 584 aa8.65□□□□□ -1.02
Clhc1-204ENSMUST00000208530 Bclaf1Q8K019 919 aaKnown RBP8.65□□□□□ -1.02
Clhc1-204ENSMUST00000208530 Ndufv2Q9D6J6 248 aa8.65□□□□□ -1.02
Clhc1-204ENSMUST00000208530 EdaraddQ8VHX2 208 aa8.64□□□□□ -1.03
Clhc1-204ENSMUST00000208530 Scarf1Q5ND28 820 aa8.63□□□□□ -1.03
Clhc1-204ENSMUST00000208530 Fndc3aQ8BX90 1198 aa8.62□□□□□ -1.03
Clhc1-204ENSMUST00000208530 Jph4Q80WT0 628 aa8.6□□□□□ -1.03
Clhc1-204ENSMUST00000208530 Prim1P20664 417 aa8.58□□□□□ -1.04
Clhc1-204ENSMUST00000208530 Msh5Q9QUM7 833 aa8.58□□□□□ -1.04
Clhc1-204ENSMUST00000208530 Chrm1P12657 460 aa8.57□□□□□ -1.04
Clhc1-204ENSMUST00000208530 PsdQ5DTT2 1024 aa8.54□□□□□ -1.04
Clhc1-204ENSMUST00000208530 Axin1O35625 863 aa8.53□□□□□ -1.04
Clhc1-204ENSMUST00000208530 Dkk1O54908 272 aa8.52□□□□□ -1.05
Clhc1-204ENSMUST00000208530 Ier5lQ99J55 406 aa8.52□□□□□ -1.05
Clhc1-204ENSMUST00000208530 Lce6aD3YV94 81 aa8.5□□□□□ -1.05
Clhc1-204ENSMUST00000208530 Sall2Q9QX96 1004 aa8.49□□□□□ -1.05
Clhc1-204ENSMUST00000208530 Scnn1bQ9WU38 638 aa8.46□□□□□ -1.05
Clhc1-204ENSMUST00000208530 Evi5P97366 809 aa8.45□□□□□ -1.06
Clhc1-204ENSMUST00000208530 Spock2Q9ER58 423 aa8.45□□□□□ -1.06
Clhc1-204ENSMUST00000208530 Irx5Q9JKQ4 484 aa8.44□□□□□ -1.06
Clhc1-204ENSMUST00000208530 Pcdhb17Q91VD8 799 aa8.44□□□□□ -1.06
Clhc1-204ENSMUST00000208530 Adnp2Q8CHC8 1165 aaKnown RBP8.42□□□□□ -1.06
Clhc1-204ENSMUST00000208530 Thap8E9Q695 213 aa8.41□□□□□ -1.06
Clhc1-204ENSMUST00000208530 ElnP54320 860 aa8.41□□□□□ -1.06
Clhc1-204ENSMUST00000208530 Ube2uB1AUC4 352 aa8.38□□□□□ -1.07
Clhc1-204ENSMUST00000208530 Actn4P57780 912 aaKnown RBP8.38□□□□□ -1.07
Clhc1-204ENSMUST00000208530 Gm11563B1AQ90 168 aa8.37□□□□□ -1.07
Clhc1-204ENSMUST00000208530 Krtap4-7Q9D732 168 aa8.37□□□□□ -1.07
Clhc1-204ENSMUST00000208530 Kdm2aP59997 1161 aa8.34□□□□□ -1.07
Clhc1-204ENSMUST00000208530 Nap1l5Q9JJF0 156 aa8.34□□□□□ -1.07
Clhc1-204ENSMUST00000208530 Gm11555B1AQ89 175 aa8.33□□□□□ -1.08
Clhc1-204ENSMUST00000208530 Fkbp4P30416 458 aa8.3□□□□□ -1.08
Clhc1-204ENSMUST00000208530 Ferd3lQ923Z4 168 aa8.3□□□□□ -1.08
Clhc1-204ENSMUST00000208530 Gga1Q8R0H9 635 aa8.29□□□□□ -1.08
Clhc1-204ENSMUST00000208530 Ano8Q6PB70 1060 aa8.28□□□□□ -1.08
Clhc1-204ENSMUST00000208530 Rnf166Q3U9F6 237 aa8.27□□□□□ -1.09
Clhc1-204ENSMUST00000208530 Dnm1lQ8K1M6 742 aa8.26□□□□□ -1.09
Clhc1-204ENSMUST00000208530 Setdb2Q8C267 713 aa8.26□□□□□ -1.09
Clhc1-204ENSMUST00000208530 Ankrd65F6YK91 380 aa8.25□□□□□ -1.09
Clhc1-204ENSMUST00000208530 Neurod1Q60867 357 aa8.25□□□□□ -1.09
Clhc1-204ENSMUST00000208530 RragcQ99K70 398 aa8.25□□□□□ -1.09
Clhc1-204ENSMUST00000208530 Apba1B2RUJ5 842 aa8.25□□□□□ -1.09
Clhc1-204ENSMUST00000208530 Myt1lP97500 1187 aa8.23□□□□□ -1.09
Clhc1-204ENSMUST00000208530 Smpd1Q04519 627 aa8.23□□□□□ -1.09
Clhc1-204ENSMUST00000208530 E9Q0B3 247 aa8.2□□□□□ -1.1
Clhc1-204ENSMUST00000208530 Sptlc1O35704 473 aa8.18□□□□□ -1.1
Clhc1-204ENSMUST00000208530 Onecut3Q8K557 490 aa8.17□□□□□ -1.1
Clhc1-204ENSMUST00000208530 TimelessQ9R1X4 1197 aa8.16□□□□□ -1.1
Clhc1-204ENSMUST00000208530 Hoxa2P31245 372 aa8.15□□□□□ -1.11
Clhc1-204ENSMUST00000208530 Ecm2Q5FW85 670 aa8.14□□□□□ -1.11
Clhc1-204ENSMUST00000208530 Otop3Q80UF9 577 aa8.14□□□□□ -1.11
Clhc1-204ENSMUST00000208530 Tox2A2A472 547 aa8.13□□□□□ -1.11
Clhc1-204ENSMUST00000208530 Pdzrn4E9PUZ9 1014 aa8.12□□□□□ -1.11
Clhc1-204ENSMUST00000208530 Pbx2O35984 430 aa8.12□□□□□ -1.11
Clhc1-204ENSMUST00000208530 Rsph6aQ8CDR2 708 aa8.11□□□□□ -1.11
Clhc1-204ENSMUST00000208530 Stk3Q9JI10 497 aa8.1□□□□□ -1.11
Clhc1-204ENSMUST00000208530 Ppp6r1Q7TSI3 856 aa8.09□□□□□ -1.11
Clhc1-204ENSMUST00000208530 A0A1Y7VJH8 109 aa8.07□□□□□ -1.12
Clhc1-204ENSMUST00000208530 Mier1Q5UAK0 511 aa8.05□□□□□ -1.12
Clhc1-204ENSMUST00000208530 Fmr1nbQ80ZA7 238 aa8.03□□□□□ -1.12
Clhc1-204ENSMUST00000208530 Cypt1Q8CH20 168 aa8.03□□□□□ -1.12
Clhc1-204ENSMUST00000208530 Erich4Q3UNU4 136 aa8.02□□□□□ -1.12
Clhc1-204ENSMUST00000208530 Znf354bQ9QXT9 601 aa8.02□□□□□ -1.12
Clhc1-204ENSMUST00000208530 Mnx1Q9QZW9 404 aa8.02□□□□□ -1.12
Clhc1-204ENSMUST00000208530 Stk24Q99KH8 431 aa8.02□□□□□ -1.13
Clhc1-204ENSMUST00000208530 Klra4Q60651 263 aa8.01□□□□□ -1.13
Clhc1-204ENSMUST00000208530 Zbtb22Q9Z0G7 638 aa7.99□□□□□ -1.13
Clhc1-204ENSMUST00000208530 Lhx6Q9R1R0 363 aa7.98□□□□□ -1.13
Clhc1-204ENSMUST00000208530 Stk25Q9Z2W1 426 aa7.97□□□□□ -1.13
Clhc1-204ENSMUST00000208530 Gabbr2Q80T41 940 aa7.96□□□□□ -1.14
Clhc1-204ENSMUST00000208530 GcgrQ61606 485 aa7.94□□□□□ -1.14
Clhc1-204ENSMUST00000208530 Slc24a1Q91WD8 1130 aa7.94□□□□□ -1.14
Clhc1-204ENSMUST00000208530 Erbb3Q61526 1339 aa7.93□□□□□ -1.14
Clhc1-204ENSMUST00000208530 Gm11939A2A592 99 aa7.93□□□□□ -1.14
Clhc1-204ENSMUST00000208530 Saxo1B1AXP3 476 aa7.91□□□□□ -1.14
Clhc1-204ENSMUST00000208530 Fbxo31Q3TQF0 507 aa7.91□□□□□ -1.14
Clhc1-204ENSMUST00000208530 Rgl2Q61193 778 aa7.91□□□□□ -1.14
Clhc1-204ENSMUST00000208530 Myt1Q8CFC2 1127 aa7.91□□□□□ -1.14
Clhc1-204ENSMUST00000208530 Crim1Q9JLL0 1037 aa7.91□□□□□ -1.14
Retrieved 100 of 22,080 RNA–protein pairs in 82.5 ms