RNA–Protein interactions for RNA: ENSMUST00000171158.7

Sdc1-205, Transcript of Syndecan-1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Sdc1, Length 2,311 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc1-205ENSMUST00000171158 Lmo7E9PYF4 1699 aaKnown RBP23.02■■□□□ 1.28
Sdc1-205ENSMUST00000171158 Efcab5A0JP43 1406 aa23.02■■□□□ 1.28
Sdc1-205ENSMUST00000171158 Slx4Q6P1D7 1565 aa23■■□□□ 1.27
Sdc1-205ENSMUST00000171158 Fam135aQ6NS59 1506 aa23■■□□□ 1.27
Sdc1-205ENSMUST00000171158 Carmil1Q6EDY6 1374 aa22.96■■□□□ 1.27
Sdc1-205ENSMUST00000171158 LrpprcQ6PB66 1392 aaKnown RBP22.96■■□□□ 1.27
Sdc1-205ENSMUST00000171158 PogzQ8BZH4 1409 aaKnown RBP22.96■■□□□ 1.27
Sdc1-205ENSMUST00000171158 Cux1P53564 1515 aa22.95■■□□□ 1.26
Sdc1-205ENSMUST00000171158 Ubl4bQ9CQ84 188 aa22.93■■□□□ 1.26
Sdc1-205ENSMUST00000171158 BlmO88700 1416 aa22.93■■□□□ 1.26
Sdc1-205ENSMUST00000171158 Duox2A2AQ99 1517 aa22.92■■□□□ 1.26
Sdc1-205ENSMUST00000171158 Npm1Q61937 292 aaKnown RBP22.92■■□□□ 1.26
Sdc1-205ENSMUST00000171158 Dnajc5bQ9CQ94 199 aa22.92■■□□□ 1.26
Sdc1-205ENSMUST00000171158 Peg3Q3URU2 1571 aa22.87■■□□□ 1.25
Sdc1-205ENSMUST00000171158 Urb2E9Q7L1 1524 aaKnown RBP22.86■■□□□ 1.25
Sdc1-205ENSMUST00000171158 CntlnA2AM05 1397 aa22.86■■□□□ 1.25
Sdc1-205ENSMUST00000171158 Anks4bQ8K3X6 423 aa22.85■■□□□ 1.25
Sdc1-205ENSMUST00000171158 SynmQ70IV5 1561 aa22.84■■□□□ 1.25
Sdc1-205ENSMUST00000171158 Samd9lQ69Z37 1561 aa22.84■■□□□ 1.25
Sdc1-205ENSMUST00000171158 Ppargc1bQ8VHJ7 1014 aa22.8■■□□□ 1.24
Sdc1-205ENSMUST00000171158 Nop58Q6DFW4 536 aaKnown RBP22.78■■□□□ 1.24
Sdc1-205ENSMUST00000171158 Fyco1Q8VDC1 1437 aa22.78■■□□□ 1.24
Sdc1-205ENSMUST00000171158 Eid3Q3V124 375 aa22.77■■□□□ 1.24
Sdc1-205ENSMUST00000171158 Cdk11bP24788 784 aaKnown RBP22.76■■□□□ 1.23
Sdc1-205ENSMUST00000171158 Polr1aO35134 1717 aaKnown RBP22.76■■□□□ 1.23
Sdc1-205ENSMUST00000171158 3425401B19RikD3Z1D3 1412 aa22.74■■□□□ 1.23
Sdc1-205ENSMUST00000171158 Dhx29Q6PGC1 1365 aaKnown RBP22.73■■□□□ 1.23
Sdc1-205ENSMUST00000171158 Lmod2Q3UHZ5 550 aa22.68■■□□□ 1.22
Sdc1-205ENSMUST00000171158 Gm1043A0A140LJC2 1431 aa22.67■■□□□ 1.22
Sdc1-205ENSMUST00000171158 Rpap1Q80TE0 1409 aa22.67■■□□□ 1.22
Sdc1-205ENSMUST00000171158 Rad54l2Q99NG0 1466 aa22.66■■□□□ 1.22
Sdc1-205ENSMUST00000171158 Crocc2F6XLV1 1638 aa22.65■■□□□ 1.22
Sdc1-205ENSMUST00000171158 Fhad1A6PWD2 1420 aa22.63■■□□□ 1.21
Sdc1-205ENSMUST00000171158 Aebp1Q640N1 1128 aa22.63■■□□□ 1.21
Sdc1-205ENSMUST00000171158 Fam50aQ9WV03 339 aaKnown RBP22.62■■□□□ 1.21
Sdc1-205ENSMUST00000171158 Kif21aQ9QXL2 1672 aa22.6■■□□□ 1.21
Sdc1-205ENSMUST00000171158 Mia2Q91ZV0 1396 aa22.59■■□□□ 1.21
Sdc1-205ENSMUST00000171158 Gm7298A0A0N4SVU1 1476 aa22.59■■□□□ 1.21
Sdc1-205ENSMUST00000171158 Vps8Q0P5W1 1427 aa22.58■■□□□ 1.2
Sdc1-205ENSMUST00000171158 Pla2r1Q62028 1487 aa22.56■■□□□ 1.2
Sdc1-205ENSMUST00000171158 Ankrd36D3Z4K0 1415 aa22.55■■□□□ 1.2
Sdc1-205ENSMUST00000171158 Naip2Q9QUK4 1447 aa22.55■■□□□ 1.2
Sdc1-205ENSMUST00000171158 EprsQ8CGC7 1512 aaKnown RBP22.55■■□□□ 1.2
Sdc1-205ENSMUST00000171158 Abca5Q8K448 1642 aa22.53■■□□□ 1.2
Sdc1-205ENSMUST00000171158 UacaQ8CGB3 1411 aa22.51■■□□□ 1.19
Sdc1-205ENSMUST00000171158 Ccer2J3QPU5 274 aa22.49■■□□□ 1.19
Sdc1-205ENSMUST00000171158 Magi3Q9EQJ9 1476 aa22.49■■□□□ 1.19
Sdc1-205ENSMUST00000171158 Csrnp3P59055 597 aa22.48■■□□□ 1.19
Sdc1-205ENSMUST00000171158 Mrc2Q64449 1479 aa22.48■■□□□ 1.19
Sdc1-205ENSMUST00000171158 Lmtk2Q3TYD6 1471 aa22.48■■□□□ 1.19
Sdc1-205ENSMUST00000171158 A2mQ6GQT1 1474 aa22.47■■□□□ 1.19
Sdc1-205ENSMUST00000171158 Gpatch8A2A6A1 1505 aa22.46■■□□□ 1.19
Sdc1-205ENSMUST00000171158 CadpsQ80TJ1 1355 aa22.46■■□□□ 1.19
Sdc1-205ENSMUST00000171158 Grin2aP35436 1464 aa22.41■■□□□ 1.18
Sdc1-205ENSMUST00000171158 Ccnb3Q810T2 1396 aa22.4■■□□□ 1.18
Sdc1-205ENSMUST00000171158 Gcc2Q8CHG3 1679 aa22.4■■□□□ 1.18
Sdc1-205ENSMUST00000171158 Adamts12Q811B3 1600 aa22.39■■□□□ 1.18
Sdc1-205ENSMUST00000171158 Dennd4bQ3U1Y4 1499 aa22.38■■□□□ 1.17
Sdc1-205ENSMUST00000171158 WizO88286 1684 aaKnown RBP22.37■■□□□ 1.17
Sdc1-205ENSMUST00000171158 Cul7Q8VE73 1689 aa22.36■■□□□ 1.17
Sdc1-205ENSMUST00000171158 Hspa5P20029 655 aaKnown RBP22.35■■□□□ 1.17
Sdc1-205ENSMUST00000171158 Kif27Q7M6Z4 1394 aa22.34■■□□□ 1.17
Sdc1-205ENSMUST00000171158 Fhod3Q76LL6 1578 aa22.34■■□□□ 1.17
Sdc1-205ENSMUST00000171158 NclP09405 707 aaKnown RBP22.34■■□□□ 1.17
Sdc1-205ENSMUST00000171158 1700123L14RikQ3V2K7 440 aa22.34■■□□□ 1.17
Sdc1-205ENSMUST00000171158 Plb1Q3TTY0 1478 aa22.34■■□□□ 1.17
Sdc1-205ENSMUST00000171158 Disp1Q3TDN0 1521 aa22.33■■□□□ 1.16
Sdc1-205ENSMUST00000171158 NexmifQ5DTT1 1515 aa22.32■■□□□ 1.16
Sdc1-205ENSMUST00000171158 Camsap2Q8C1B1 1461 aa22.31■■□□□ 1.16
Sdc1-205ENSMUST00000171158 BC005561E9Q5E2 1589 aa22.31■■□□□ 1.16
Sdc1-205ENSMUST00000171158 Setd1bQ8CFT2 1985 aa22.31■■□□□ 1.16
Sdc1-205ENSMUST00000171158 Soga1E1U8D0 1418 aa22.31■■□□□ 1.16
Sdc1-205ENSMUST00000171158 Gm13697A2AK42 830 aa22.25■■□□□ 1.15
Sdc1-205ENSMUST00000171158 PxdnQ3UQ28 1475 aa22.25■■□□□ 1.15
Sdc1-205ENSMUST00000171158 Abca16E9PWJ7 1678 aa22.24■■□□□ 1.15
Sdc1-205ENSMUST00000171158 Naip5Q9R016 1403 aa22.23■■□□□ 1.15
Sdc1-205ENSMUST00000171158 Chic2Q9D9G3 165 aa22.22■■□□□ 1.15
Sdc1-205ENSMUST00000171158 Ncoa2Q61026 1462 aa22.21■■□□□ 1.15
Sdc1-205ENSMUST00000171158 Aplp2Q06335 707 aa22.21■■□□□ 1.15
Sdc1-205ENSMUST00000171158 Pbrm1Q8BSQ9 1634 aaKnown RBP22.2■■□□□ 1.14
Sdc1-205ENSMUST00000171158 Rfx7F8VPJ6 1459 aa22.2■■□□□ 1.14
Sdc1-205ENSMUST00000171158 Setbp1Q9Z180 1582 aa22.18■■□□□ 1.14
Sdc1-205ENSMUST00000171158 Mapk8ip2Q9ERE9 830 aa22.18■■□□□ 1.14
Sdc1-205ENSMUST00000171158 Nup160Q9Z0W3 1402 aaKnown RBP22.16■■□□□ 1.14
Sdc1-205ENSMUST00000171158 Ift140E9PY46 1464 aa22.15■■□□□ 1.14
Sdc1-205ENSMUST00000171158 Rapgef6Q5NCJ1 1609 aa22.14■■□□□ 1.13
Sdc1-205ENSMUST00000171158 Mug1P28665 1476 aa22.13■■□□□ 1.13
Sdc1-205ENSMUST00000171158 Ube2uB1AUC4 352 aa22.13■■□□□ 1.13
Sdc1-205ENSMUST00000171158 WrnO09053 1401 aa22.12■■□□□ 1.13
Sdc1-205ENSMUST00000171158 Ncoa3O09000 1398 aa22.1■■□□□ 1.13
Sdc1-205ENSMUST00000171158 Abcc5Q9R1X5 1436 aa22.08■■□□□ 1.13
Sdc1-205ENSMUST00000171158 Mphosph9A6H5Y1 991 aa22.07■■□□□ 1.12
Sdc1-205ENSMUST00000171158 Cdc42bpaQ3UU96 1719 aa22.06■■□□□ 1.12
Sdc1-205ENSMUST00000171158 Arhgef40Q3UPH7 1517 aa22.06■■□□□ 1.12
Sdc1-205ENSMUST00000171158 Arhgef11Q68FM7 1552 aa22.05■■□□□ 1.12
Sdc1-205ENSMUST00000171158 Plekhh2Q8C115 1491 aa22.05■■□□□ 1.12
Sdc1-205ENSMUST00000171158 Abcc2Q8VI47 1543 aa22.05■■□□□ 1.12
Sdc1-205ENSMUST00000171158 Tnnt3Q9QZ47 272 aa22.05■■□□□ 1.12
Sdc1-205ENSMUST00000171158 Cabp1Q9JLK7 227 aa22.03■■□□□ 1.12
Sdc1-205ENSMUST00000171158 Kdm6bQ5NCY0 1641 aa22.03■■□□□ 1.12
Retrieved 100 of 22,080 RNA–protein pairs in 20.7 ms