RNA–Protein interactions for RNA: ENSMUST00000116492.2

Ubp1-203, Transcript of Upstream-binding protein 1, mousemouse

APPRIS ALT1 TSL 1 (best) BASIC

Gene Ubp1, Length 2,111 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ubp1-203ENSMUST00000116492 TonslQ6NZL6 1363 aa35.57■■■■□ 3.29
Ubp1-203ENSMUST00000116492 Pcf11G3X9Z4 1553 aa35.53■■■■□ 3.28
Ubp1-203ENSMUST00000116492 Lmo7E9PYF4 1699 aaKnown RBP35.49■■■■□ 3.27
Ubp1-203ENSMUST00000116492 Kdm5bQ80Y84 1544 aa35.48■■■■□ 3.27
Ubp1-203ENSMUST00000116492 TchhA0A0B4J1F9 1599 aa35.47■■■■□ 3.27
Ubp1-203ENSMUST00000116492 Aebp2Q9Z248 504 aaKnown RBP35.46■■■■□ 3.27
Ubp1-203ENSMUST00000116492 BlmO88700 1416 aa35.45■■■■□ 3.27
Ubp1-203ENSMUST00000116492 Cux1P53564 1515 aa35.43■■■■□ 3.26
Ubp1-203ENSMUST00000116492 Wdr66E9Q743 1299 aa35.42■■■■□ 3.26
Ubp1-203ENSMUST00000116492 Slx4Q6P1D7 1565 aa35.41■■■■□ 3.26
Ubp1-203ENSMUST00000116492 CntlnA2AM05 1397 aa35.41■■■■□ 3.26
Ubp1-203ENSMUST00000116492 ClspnQ80YR7 1315 aa35.4■■■■□ 3.26
Ubp1-203ENSMUST00000116492 SynmQ70IV5 1561 aa35.39■■■■□ 3.26
Ubp1-203ENSMUST00000116492 Samd9lQ69Z37 1561 aa35.34■■■■□ 3.25
Ubp1-203ENSMUST00000116492 Urb2E9Q7L1 1524 aaKnown RBP35.33■■■■□ 3.25
Ubp1-203ENSMUST00000116492 Dhx29Q6PGC1 1365 aaKnown RBP35.33■■■■□ 3.25
Ubp1-203ENSMUST00000116492 Neurod1Q60867 357 aa35.32■■■■□ 3.24
Ubp1-203ENSMUST00000116492 Peg3Q3URU2 1571 aa35.31■■■■□ 3.24
Ubp1-203ENSMUST00000116492 Fyco1Q8VDC1 1437 aa35.31■■■■□ 3.24
Ubp1-203ENSMUST00000116492 Polr1aO35134 1717 aaKnown RBP35.3■■■■□ 3.24
Ubp1-203ENSMUST00000116492 Rpap1Q80TE0 1409 aa35.24■■■■□ 3.23
Ubp1-203ENSMUST00000116492 Crocc2F6XLV1 1638 aa35.17■■■■□ 3.22
Ubp1-203ENSMUST00000116492 Rad54l2Q99NG0 1466 aa35.11■■■■□ 3.21
Ubp1-203ENSMUST00000116492 Aebp1Q640N1 1128 aa35.08■■■■□ 3.21
Ubp1-203ENSMUST00000116492 Mrc2Q64449 1479 aa35.07■■■■□ 3.2
Ubp1-203ENSMUST00000116492 Kif21aQ9QXL2 1672 aa35.06■■■■□ 3.2
Ubp1-203ENSMUST00000116492 Lmod2Q3UHZ5 550 aa35.03■■■■□ 3.2
Ubp1-203ENSMUST00000116492 3425401B19RikD3Z1D3 1412 aa35.02■■■■□ 3.2
Ubp1-203ENSMUST00000116492 Gm1043A0A140LJC2 1431 aa35■■■■□ 3.19
Ubp1-203ENSMUST00000116492 EprsQ8CGC7 1512 aaKnown RBP34.96■■■■□ 3.19
Ubp1-203ENSMUST00000116492 Eid3Q3V124 375 aa34.96■■■■□ 3.19
Ubp1-203ENSMUST00000116492 Pla2r1Q62028 1487 aa34.95■■■■□ 3.18
Ubp1-203ENSMUST00000116492 Mia2Q91ZV0 1396 aa34.92■■■■□ 3.18
Ubp1-203ENSMUST00000116492 Fhad1A6PWD2 1420 aa34.92■■■■□ 3.18
Ubp1-203ENSMUST00000116492 Fam50aQ9WV03 339 aaKnown RBP34.9■■■■□ 3.18
Ubp1-203ENSMUST00000116492 Magi3Q9EQJ9 1476 aa34.87■■■■□ 3.17
Ubp1-203ENSMUST00000116492 Abca5Q8K448 1642 aa34.85■■■■□ 3.17
Ubp1-203ENSMUST00000116492 Gm7298A0A0N4SVU1 1476 aa34.84■■■■□ 3.17
Ubp1-203ENSMUST00000116492 Ccer2J3QPU5 274 aa34.84■■■■□ 3.17
Ubp1-203ENSMUST00000116492 Anks4bQ8K3X6 423 aa34.82■■■■□ 3.16
Ubp1-203ENSMUST00000116492 CadpsQ80TJ1 1355 aa34.82■■■■□ 3.16
Ubp1-203ENSMUST00000116492 Vps8Q0P5W1 1427 aa34.81■■■■□ 3.16
Ubp1-203ENSMUST00000116492 Nop58Q6DFW4 536 aaKnown RBP34.81■■■■□ 3.16
Ubp1-203ENSMUST00000116492 Cdk11bP24788 784 aaKnown RBP34.79■■■■□ 3.16
Ubp1-203ENSMUST00000116492 Grin2aP35436 1464 aa34.78■■■■□ 3.16
Ubp1-203ENSMUST00000116492 Naip2Q9QUK4 1447 aa34.77■■■■□ 3.16
Ubp1-203ENSMUST00000116492 Ankrd36D3Z4K0 1415 aa34.77■■■■□ 3.16
Ubp1-203ENSMUST00000116492 Gpatch8A2A6A1 1505 aa34.76■■■■□ 3.15
Ubp1-203ENSMUST00000116492 Ppargc1bQ8VHJ7 1014 aa34.75■■■■□ 3.15
Ubp1-203ENSMUST00000116492 Plb1Q3TTY0 1478 aa34.74■■■■□ 3.15
Ubp1-203ENSMUST00000116492 Lmtk2Q3TYD6 1471 aa34.73■■■■□ 3.15
Ubp1-203ENSMUST00000116492 Adamts12Q811B3 1600 aa34.7■■■■□ 3.15
Ubp1-203ENSMUST00000116492 Disp1Q3TDN0 1521 aa34.7■■■■□ 3.15
Ubp1-203ENSMUST00000116492 A2mQ6GQT1 1474 aa34.64■■■■□ 3.14
Ubp1-203ENSMUST00000116492 Kif27Q7M6Z4 1394 aa34.64■■■■□ 3.14
Ubp1-203ENSMUST00000116492 Ccnb3Q810T2 1396 aa34.63■■■■□ 3.13
Ubp1-203ENSMUST00000116492 UacaQ8CGB3 1411 aa34.63■■■■□ 3.13
Ubp1-203ENSMUST00000116492 WizO88286 1684 aaKnown RBP34.62■■■■□ 3.13
Ubp1-203ENSMUST00000116492 Soga1E1U8D0 1418 aa34.62■■■■□ 3.13
Ubp1-203ENSMUST00000116492 Gcc2Q8CHG3 1679 aa34.55■■■■□ 3.12
Ubp1-203ENSMUST00000116492 Pbrm1Q8BSQ9 1634 aaKnown RBP34.52■■■■□ 3.12
Ubp1-203ENSMUST00000116492 Ift140E9PY46 1464 aa34.52■■■■□ 3.12
Ubp1-203ENSMUST00000116492 Dnajc5bQ9CQ94 199 aa34.51■■■■□ 3.12
Ubp1-203ENSMUST00000116492 Setd1bQ8CFT2 1985 aa34.48■■■■□ 3.11
Ubp1-203ENSMUST00000116492 NexmifQ5DTT1 1515 aa34.46■■■■□ 3.11
Ubp1-203ENSMUST00000116492 Nup160Q9Z0W3 1402 aaKnown RBP34.45■■■■□ 3.11
Ubp1-203ENSMUST00000116492 PxdnQ3UQ28 1475 aa34.44■■■■□ 3.1
Ubp1-203ENSMUST00000116492 BC005561E9Q5E2 1589 aa34.44■■■■□ 3.1
Ubp1-203ENSMUST00000116492 Fhod3Q76LL6 1578 aa34.42■■■■□ 3.1
Ubp1-203ENSMUST00000116492 Dennd4bQ3U1Y4 1499 aa34.42■■■■□ 3.1
Ubp1-203ENSMUST00000116492 Abca16E9PWJ7 1678 aa34.41■■■■□ 3.1
Ubp1-203ENSMUST00000116492 NclP09405 707 aaKnown RBP34.38■■■■□ 3.09
Ubp1-203ENSMUST00000116492 Hspa5P20029 655 aaKnown RBP34.37■■■■□ 3.09
Ubp1-203ENSMUST00000116492 Cul7Q8VE73 1689 aa34.35■■■■□ 3.09
Ubp1-203ENSMUST00000116492 Camsap2Q8C1B1 1461 aa34.34■■■■□ 3.09
Ubp1-203ENSMUST00000116492 Rfx7F8VPJ6 1459 aa34.31■■■■□ 3.08
Ubp1-203ENSMUST00000116492 WrnO09053 1401 aa34.31■■■■□ 3.08
Ubp1-203ENSMUST00000116492 Chic2Q9D9G3 165 aa34.29■■■■□ 3.08
Ubp1-203ENSMUST00000116492 Rapgef6Q5NCJ1 1609 aa34.26■■■■□ 3.08
Ubp1-203ENSMUST00000116492 Mug1P28665 1476 aa34.26■■■■□ 3.08
Ubp1-203ENSMUST00000116492 Gm13697A2AK42 830 aa34.25■■■■□ 3.07
Ubp1-203ENSMUST00000116492 Cc2d2bA0A286YDU8 1405 aa34.23■■■■□ 3.07
Ubp1-203ENSMUST00000116492 Ube2uB1AUC4 352 aa34.21■■■■□ 3.07
Ubp1-203ENSMUST00000116492 Ncoa3O09000 1398 aa34.21■■■■□ 3.07
Ubp1-203ENSMUST00000116492 Ncoa2Q61026 1462 aa34.19■■■■□ 3.06
Ubp1-203ENSMUST00000116492 Naip5Q9R016 1403 aa34.18■■■■□ 3.06
Ubp1-203ENSMUST00000116492 Abcc2Q8VI47 1543 aa34.16■■■■□ 3.06
Ubp1-203ENSMUST00000116492 Shroom2A2ALU4 1481 aa34.14■■■■□ 3.06
Ubp1-203ENSMUST00000116492 Lrriq1Q0P5X1 1673 aa34.14■■■■□ 3.06
Ubp1-203ENSMUST00000116492 Setbp1Q9Z180 1582 aa34.14■■■■□ 3.06
Ubp1-203ENSMUST00000116492 Abcc5Q9R1X5 1436 aa34.13■■■■□ 3.05
Ubp1-203ENSMUST00000116492 Arhgap27A2AB59 869 aa34.12■■■■□ 3.05
Ubp1-203ENSMUST00000116492 Arhgef11Q68FM7 1552 aa34.11■■■■□ 3.05
Ubp1-203ENSMUST00000116492 Plekhh2Q8C115 1491 aa34.11■■■■□ 3.05
Ubp1-203ENSMUST00000116492 Mphosph9A6H5Y1 991 aa34.08■■■■□ 3.05
Ubp1-203ENSMUST00000116492 Csrnp3P59055 597 aa34.08■■■■□ 3.05
Ubp1-203ENSMUST00000116492 Cabp1Q9JLK7 227 aa34.07■■■■□ 3.04
Ubp1-203ENSMUST00000116492 Cdc42bpaQ3UU96 1719 aa34.06■■■■□ 3.04
Ubp1-203ENSMUST00000116492 Arhgef40Q3UPH7 1517 aa34.05■■■■□ 3.04
Ubp1-203ENSMUST00000116492 Kiaa1551Q5DTW7 1521 aa34.04■■■■□ 3.04
Retrieved 100 of 22,080 RNA–protein pairs in 60.4 ms