RNA–Protein interactions for RNA: ENSMUST00000112519.8

Chfr-202, Transcript of E3 ubiquitin-protein ligase CHFR, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Chfr, Length 3,159 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Chfr-202ENSMUST00000112519 Ncapd3Q6ZQK0 1506 aa19.37■□□□□ 0.69
Chfr-202ENSMUST00000112519 Dhx29Q6PGC1 1365 aaKnown RBP19.36■□□□□ 0.69
Chfr-202ENSMUST00000112519 Lmod2Q3UHZ5 550 aa19.35■□□□□ 0.69
Chfr-202ENSMUST00000112519 Samd9lQ69Z37 1561 aa19.34■□□□□ 0.69
Chfr-202ENSMUST00000112519 Cux1P53564 1515 aa19.34■□□□□ 0.69
Chfr-202ENSMUST00000112519 Rad54l2Q99NG0 1466 aa19.32■□□□□ 0.68
Chfr-202ENSMUST00000112519 BlmO88700 1416 aa19.31■□□□□ 0.68
Chfr-202ENSMUST00000112519 Pcf11G3X9Z4 1553 aa19.3■□□□□ 0.68
Chfr-202ENSMUST00000112519 TonslQ6NZL6 1363 aa19.29■□□□□ 0.68
Chfr-202ENSMUST00000112519 Naip1Q9QWK5 1403 aa19.29■□□□□ 0.68
Chfr-202ENSMUST00000112519 Tiam1Q60610 1591 aa19.29■□□□□ 0.68
Chfr-202ENSMUST00000112519 Carmil1Q6EDY6 1374 aa19.29■□□□□ 0.68
Chfr-202ENSMUST00000112519 Erich3F6QRE9 1637 aa19.28■□□□□ 0.68
Chfr-202ENSMUST00000112519 Kif21aQ9QXL2 1672 aa19.27■□□□□ 0.68
Chfr-202ENSMUST00000112519 Slx4Q6P1D7 1565 aa19.26■□□□□ 0.67
Chfr-202ENSMUST00000112519 Eid3Q3V124 375 aa19.25■□□□□ 0.67
Chfr-202ENSMUST00000112519 Nop58Q6DFW4 536 aaKnown RBP19.23■□□□□ 0.67
Chfr-202ENSMUST00000112519 SynmQ70IV5 1561 aa19.22■□□□□ 0.67
Chfr-202ENSMUST00000112519 Mrc2Q64449 1479 aa19.21■□□□□ 0.67
Chfr-202ENSMUST00000112519 Cdk11bP24788 784 aaKnown RBP19.21■□□□□ 0.67
Chfr-202ENSMUST00000112519 ClspnQ80YR7 1315 aa19.21■□□□□ 0.66
Chfr-202ENSMUST00000112519 Lmo7E9PYF4 1699 aaKnown RBP19.2■□□□□ 0.66
Chfr-202ENSMUST00000112519 Csrnp3P59055 597 aa19.2■□□□□ 0.66
Chfr-202ENSMUST00000112519 Crocc2F6XLV1 1638 aa19.19■□□□□ 0.66
Chfr-202ENSMUST00000112519 Urb2E9Q7L1 1524 aaKnown RBP19.16■□□□□ 0.66
Chfr-202ENSMUST00000112519 Fam50aQ9WV03 339 aaKnown RBP19.14■□□□□ 0.66
Chfr-202ENSMUST00000112519 Aebp1Q640N1 1128 aa19.14■□□□□ 0.65
Chfr-202ENSMUST00000112519 Anks4bQ8K3X6 423 aa19.12■□□□□ 0.65
Chfr-202ENSMUST00000112519 Fyco1Q8VDC1 1437 aa19.1■□□□□ 0.65
Chfr-202ENSMUST00000112519 Plb1Q3TTY0 1478 aa19.1■□□□□ 0.65
Chfr-202ENSMUST00000112519 CntlnA2AM05 1397 aa19.1■□□□□ 0.65
Chfr-202ENSMUST00000112519 Kdm5bQ80Y84 1544 aa19.09■□□□□ 0.65
Chfr-202ENSMUST00000112519 Pla2r1Q62028 1487 aa19.08■□□□□ 0.64
Chfr-202ENSMUST00000112519 EprsQ8CGC7 1512 aaKnown RBP19.05■□□□□ 0.64
Chfr-202ENSMUST00000112519 3425401B19RikD3Z1D3 1412 aa19.04■□□□□ 0.64
Chfr-202ENSMUST00000112519 Magi3Q9EQJ9 1476 aa19.04■□□□□ 0.64
Chfr-202ENSMUST00000112519 Mapk8ip2Q9ERE9 830 aa19.04■□□□□ 0.64
Chfr-202ENSMUST00000112519 Gm38655A0A286YDK6 273 aa19.03■□□□□ 0.64
Chfr-202ENSMUST00000112519 1700123L14RikQ3V2K7 440 aa19.01■□□□□ 0.63
Chfr-202ENSMUST00000112519 Gm1043A0A140LJC2 1431 aa19■□□□□ 0.63
Chfr-202ENSMUST00000112519 Polr1aO35134 1717 aaKnown RBP19■□□□□ 0.63
Chfr-202ENSMUST00000112519 Grin2aP35436 1464 aa19■□□□□ 0.63
Chfr-202ENSMUST00000112519 Rpap1Q80TE0 1409 aa18.99■□□□□ 0.63
Chfr-202ENSMUST00000112519 CadpsQ80TJ1 1355 aa18.98■□□□□ 0.63
Chfr-202ENSMUST00000112519 Disp1Q3TDN0 1521 aa18.98■□□□□ 0.63
Chfr-202ENSMUST00000112519 Setd1bQ8CFT2 1985 aa18.97■□□□□ 0.63
Chfr-202ENSMUST00000112519 WizO88286 1684 aaKnown RBP18.96■□□□□ 0.62
Chfr-202ENSMUST00000112519 TchhA0A0B4J1F9 1599 aa18.95■□□□□ 0.62
Chfr-202ENSMUST00000112519 Gm7298A0A0N4SVU1 1476 aa18.94■□□□□ 0.62
Chfr-202ENSMUST00000112519 Gpatch8A2A6A1 1505 aa18.94■□□□□ 0.62
Chfr-202ENSMUST00000112519 Peg3Q3URU2 1571 aa18.93■□□□□ 0.62
Chfr-202ENSMUST00000112519 PxdnQ3UQ28 1475 aa18.9■□□□□ 0.62
Chfr-202ENSMUST00000112519 Chic2Q9D9G3 165 aa18.89■□□□□ 0.61
Chfr-202ENSMUST00000112519 Abca5Q8K448 1642 aa18.89■□□□□ 0.61
Chfr-202ENSMUST00000112519 Kif27Q7M6Z4 1394 aa18.87■□□□□ 0.61
Chfr-202ENSMUST00000112519 Ccnb3Q810T2 1396 aa18.86■□□□□ 0.61
Chfr-202ENSMUST00000112519 Adamts12Q811B3 1600 aa18.84■□□□□ 0.61
Chfr-202ENSMUST00000112519 Arhgap27A2AB59 869 aa18.82■□□□□ 0.6
Chfr-202ENSMUST00000112519 Ube2uB1AUC4 352 aa18.82■□□□□ 0.6
Chfr-202ENSMUST00000112519 A2mQ6GQT1 1474 aa18.81■□□□□ 0.6
Chfr-202ENSMUST00000112519 NclP09405 707 aaKnown RBP18.8■□□□□ 0.6
Chfr-202ENSMUST00000112519 WrnO09053 1401 aa18.8■□□□□ 0.6
Chfr-202ENSMUST00000112519 Abca16E9PWJ7 1678 aa18.79■□□□□ 0.6
Chfr-202ENSMUST00000112519 BC005561E9Q5E2 1589 aa18.79■□□□□ 0.6
Chfr-202ENSMUST00000112519 Naip2Q9QUK4 1447 aa18.79■□□□□ 0.6
Chfr-202ENSMUST00000112519 Lrriq1Q0P5X1 1673 aa18.79■□□□□ 0.6
Chfr-202ENSMUST00000112519 Soga1E1U8D0 1418 aa18.77■□□□□ 0.6
Chfr-202ENSMUST00000112519 Hspa5P20029 655 aaKnown RBP18.77■□□□□ 0.6
Chfr-202ENSMUST00000112519 Ift140E9PY46 1464 aa18.76■□□□□ 0.59
Chfr-202ENSMUST00000112519 NexmifQ5DTT1 1515 aa18.76■□□□□ 0.59
Chfr-202ENSMUST00000112519 Nup160Q9Z0W3 1402 aaKnown RBP18.76■□□□□ 0.59
Chfr-202ENSMUST00000112519 Fhad1A6PWD2 1420 aa18.75■□□□□ 0.59
Chfr-202ENSMUST00000112519 Mia2Q91ZV0 1396 aa18.73■□□□□ 0.59
Chfr-202ENSMUST00000112519 Lmtk2Q3TYD6 1471 aa18.72■□□□□ 0.59
Chfr-202ENSMUST00000112519 Vps8Q0P5W1 1427 aa18.71■□□□□ 0.58
Chfr-202ENSMUST00000112519 Ncoa3O09000 1398 aa18.68■□□□□ 0.58
Chfr-202ENSMUST00000112519 Dennd4bQ3U1Y4 1499 aa18.68■□□□□ 0.58
Chfr-202ENSMUST00000112519 Abcc2Q8VI47 1543 aa18.66■□□□□ 0.58
Chfr-202ENSMUST00000112519 Cabp1Q9JLK7 227 aa18.64■□□□□ 0.57
Chfr-202ENSMUST00000112519 Mug1P28665 1476 aa18.64■□□□□ 0.57
Chfr-202ENSMUST00000112519 Fkbp15Q6P9Q6 1216 aaKnown RBP18.63■□□□□ 0.57
Chfr-202ENSMUST00000112519 CenpbP27790 599 aa18.63■□□□□ 0.57
Chfr-202ENSMUST00000112519 Gcc2Q8CHG3 1679 aa18.62■□□□□ 0.57
Chfr-202ENSMUST00000112519 Pbrm1Q8BSQ9 1634 aaKnown RBP18.62■□□□□ 0.57
Chfr-202ENSMUST00000112519 Shroom2A2ALU4 1481 aa18.62■□□□□ 0.57
Chfr-202ENSMUST00000112519 Slc24a1Q91WD8 1130 aa18.62■□□□□ 0.57
Chfr-202ENSMUST00000112519 Rapgef6Q5NCJ1 1609 aa18.6■□□□□ 0.57
Chfr-202ENSMUST00000112519 Cc2d2bA0A286YDU8 1405 aa18.6■□□□□ 0.57
Chfr-202ENSMUST00000112519 Aplp2Q06335 707 aa18.6■□□□□ 0.57
Chfr-202ENSMUST00000112519 Zfp644E9QA22 1323 aa18.59■□□□□ 0.57
Chfr-202ENSMUST00000112519 Arhgef40Q3UPH7 1517 aa18.59■□□□□ 0.57
Chfr-202ENSMUST00000112519 Hnrnpul2Q00PI9 745 aaKnown RBP18.59■□□□□ 0.57
Chfr-202ENSMUST00000112519 Ccer2J3QPU5 274 aa18.59■□□□□ 0.57
Chfr-202ENSMUST00000112519 Kdm6bQ5NCY0 1641 aa18.57■□□□□ 0.56
Chfr-202ENSMUST00000112519 Arhgap31A6X8Z5 1425 aa18.57■□□□□ 0.56
Chfr-202ENSMUST00000112519 SafbD3YXK2 937 aaKnown RBP18.57■□□□□ 0.56
Chfr-202ENSMUST00000112519 Ankrd36D3Z4K0 1415 aa18.57■□□□□ 0.56
Chfr-202ENSMUST00000112519 Abcc5Q9R1X5 1436 aa18.54■□□□□ 0.56
Chfr-202ENSMUST00000112519 Arhgef11Q68FM7 1552 aa18.53■□□□□ 0.56
Chfr-202ENSMUST00000112519 UacaQ8CGB3 1411 aa18.53■□□□□ 0.56
Retrieved 100 of 22,080 RNA–protein pairs in 68.4 ms